Protein–RNA interactions for Protein: P54278

PMS2, Mismatch repair endonuclease PMS2, humanhuman

Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PMS2P54278 MIR7112-201ENST00000616126 65 ntBASIC3.27□□□□□ -1.89
PMS2P54278 SCARNA15.3-201ENST00000626315 122 ntBASIC3.27□□□□□ -1.89
PMS2P54278 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC3.27□□□□□ -1.89
PMS2P54278 SCARNA4.1-201ENST00000628597 123 ntBASIC3.27□□□□□ -1.89
PMS2P54278 VPS8-228ENST00000628962 207 ntTSL 5 BASIC3.27□□□□□ -1.89
PMS2P54278 PSMD5-AS1-215ENST00000640622 205 ntBASIC3.27□□□□□ -1.89
PMS2P54278 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
PMS2P54278 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
PMS2P54278 GSTA3-201ENST00000211122 902 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
PMS2P54278 Y_RNA.100-201ENST00000363141 102 ntBASIC3.26□□□□□ -1.89
PMS2P54278 Y_RNA.142-201ENST00000363491 102 ntBASIC3.26□□□□□ -1.89
PMS2P54278 RNU6-694P-201ENST00000364071 147 ntBASIC3.26□□□□□ -1.89
PMS2P54278 RNU6-522P-201ENST00000364497 107 ntBASIC3.26□□□□□ -1.89
PMS2P54278 RN7SKP32-201ENST00000410167 303 ntBASIC3.26□□□□□ -1.89
PMS2P54278 RNU4-46P-201ENST00000410818 138 ntBASIC3.26□□□□□ -1.89
PMS2P54278 RNU6-1148P-201ENST00000410992 104 ntBASIC3.26□□□□□ -1.89
PMS2P54278 RNA5SP344-201ENST00000411081 104 ntBASIC3.26□□□□□ -1.89
PMS2P54278 OR6C66P-201ENST00000414917 930 ntBASIC3.26□□□□□ -1.89
PMS2P54278 PDCL2P1-201ENST00000419302 352 ntBASIC3.26□□□□□ -1.89
PMS2P54278 AL645937.1-202ENST00000421799 937 ntBASIC3.26□□□□□ -1.89
PMS2P54278 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC3.26□□□□□ -1.89
PMS2P54278 AC093106.2-201ENST00000428212 385 ntBASIC3.26□□□□□ -1.89
PMS2P54278 HMGB1P27-201ENST00000431429 603 ntBASIC3.26□□□□□ -1.89
PMS2P54278 PIGFP3-201ENST00000441918 722 ntBASIC3.26□□□□□ -1.89
PMS2P54278 UBE2V1P7-201ENST00000446395 340 ntBASIC3.26□□□□□ -1.89
PMS2P54278 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC3.26□□□□□ -1.89
PMS2P54278 SNRPFP3-201ENST00000457792 225 ntBASIC3.26□□□□□ -1.89
PMS2P54278 AC087588.1-201ENST00000462203 316 ntBASIC3.26□□□□□ -1.89
PMS2P54278 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC3.26□□□□□ -1.89
PMS2P54278 AL160314.1-201ENST00000490836 438 ntBASIC3.26□□□□□ -1.89
PMS2P54278 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC3.26□□□□□ -1.89
PMS2P54278 AC104806.1-201ENST00000508720 308 ntBASIC3.26□□□□□ -1.89
PMS2P54278 RN7SKP43-201ENST00000516173 320 ntBASIC3.26□□□□□ -1.89
PMS2P54278 RNU1-103P-201ENST00000516502 125 ntBASIC3.26□□□□□ -1.89
PMS2P54278 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC3.26□□□□□ -1.89
PMS2P54278 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC3.26□□□□□ -1.89
PMS2P54278 AL137161.1-201ENST00000532231 390 ntBASIC3.26□□□□□ -1.89
PMS2P54278 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC3.26□□□□□ -1.89
PMS2P54278 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC3.26□□□□□ -1.89
PMS2P54278 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC3.26□□□□□ -1.89
PMS2P54278 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC3.26□□□□□ -1.89
PMS2P54278 AC104763.2-201ENST00000604179 382 ntBASIC3.26□□□□□ -1.89
PMS2P54278 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC3.26□□□□□ -1.89
PMS2P54278 UBE2Q2P6-201ENST00000612666 153 ntBASIC3.26□□□□□ -1.89
PMS2P54278 AL157817.1-201ENST00000614264 790 ntBASIC3.26□□□□□ -1.89
PMS2P54278 AL136221.1-201ENST00000621449 509 ntBASIC3.26□□□□□ -1.89
PMS2P54278 AC090617.10-201ENST00000624308 134 ntBASIC3.26□□□□□ -1.89
PMS2P54278 AL359697.1-201ENST00000624879 587 ntBASIC3.26□□□□□ -1.89
PMS2P54278 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC3.26□□□□□ -1.89
PMS2P54278 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
PMS2P54278 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC3.26□□□□□ -1.89
PMS2P54278 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC3.26□□□□□ -1.89
PMS2P54278 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC3.26□□□□□ -1.89
PMS2P54278 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
PMS2P54278 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC3.25□□□□□ -1.89
PMS2P54278 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
PMS2P54278 RNU6-82P-201ENST00000363970 107 ntBASIC3.25□□□□□ -1.89
PMS2P54278 SNORD81.2-201ENST00000365153 76 ntBASIC3.25□□□□□ -1.89
PMS2P54278 RNU6-510P-201ENST00000391239 108 ntBASIC3.25□□□□□ -1.89
PMS2P54278 AL606923.1-201ENST00000406616 190 ntBASIC3.25□□□□□ -1.89
PMS2P54278 AC009161.1-201ENST00000417306 376 ntBASIC3.25□□□□□ -1.89
PMS2P54278 AC092047.1-201ENST00000424997 240 ntBASIC3.25□□□□□ -1.89
PMS2P54278 RPL21P2-201ENST00000440049 481 ntBASIC3.25□□□□□ -1.89
PMS2P54278 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC3.25□□□□□ -1.89
PMS2P54278 AC093019.1-201ENST00000443135 252 ntBASIC3.25□□□□□ -1.89
PMS2P54278 AC092001.1-201ENST00000453012 261 ntBASIC3.25□□□□□ -1.89
PMS2P54278 RPL21P99-201ENST00000480369 423 ntBASIC3.25□□□□□ -1.89
PMS2P54278 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC3.25□□□□□ -1.89
PMS2P54278 RNU6-1314P-201ENST00000517139 104 ntBASIC3.25□□□□□ -1.89
PMS2P54278 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC3.25□□□□□ -1.89
PMS2P54278 HIGD1AP1-201ENST00000550979 275 ntBASIC3.25□□□□□ -1.89
PMS2P54278 AMZ2P1-203ENST00000565833 850 ntBASIC3.25□□□□□ -1.89
PMS2P54278 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC3.25□□□□□ -1.89
PMS2P54278 DPPA3P3-201ENST00000603842 430 ntBASIC3.25□□□□□ -1.89
PMS2P54278 AL162713.1-201ENST00000604480 262 ntBASIC3.25□□□□□ -1.89
PMS2P54278 AC021646.1-201ENST00000605469 484 ntBASIC3.25□□□□□ -1.89
PMS2P54278 AC087045.1-201ENST00000605856 382 ntBASIC3.25□□□□□ -1.89
PMS2P54278 AC100810.6-201ENST00000638068 285 ntBASIC3.25□□□□□ -1.89
PMS2P54278 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC3.25□□□□□ -1.89
PMS2P54278 MTND4P35-201ENST00000604257 1375 ntBASIC3.25□□□□□ -1.89
PMS2P54278 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC3.25□□□□□ -1.89
PMS2P54278 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
PMS2P54278 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC3.24□□□□□ -1.89
PMS2P54278 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC3.24□□□□□ -1.89
PMS2P54278 KRTAP15-1-201ENST00000334067 671 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
PMS2P54278 SNORA14A-201ENST00000364773 135 ntBASIC3.24□□□□□ -1.89
PMS2P54278 RNU6-550P-201ENST00000391057 101 ntBASIC3.24□□□□□ -1.89
PMS2P54278 RNU6-817P-201ENST00000391083 104 ntBASIC3.24□□□□□ -1.89
PMS2P54278 SNORA48.5-201ENST00000391143 135 ntBASIC3.24□□□□□ -1.89
PMS2P54278 CD3D-202ENST00000392884 476 ntTSL 2 BASIC3.24□□□□□ -1.89
PMS2P54278 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC3.24□□□□□ -1.89
PMS2P54278 BMS1P22-201ENST00000414726 313 ntBASIC3.24□□□□□ -1.89
PMS2P54278 AL139281.1-201ENST00000422120 335 ntBASIC3.24□□□□□ -1.89
PMS2P54278 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC3.24□□□□□ -1.89
PMS2P54278 AC104332.2-201ENST00000429959 156 ntBASIC3.24□□□□□ -1.89
PMS2P54278 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC3.24□□□□□ -1.89
PMS2P54278 NEFMP1-201ENST00000443423 1006 ntBASIC3.24□□□□□ -1.89
PMS2P54278 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC3.24□□□□□ -1.89
PMS2P54278 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC3.24□□□□□ -1.89
PMS2P54278 KC877373.1-201ENST00000479066 408 ntBASIC3.24□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 194.9 ms