Protein–RNA interactions for Protein: P51800

CLCNKA, Chloride channel protein ClC-Ka, humanhuman

Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKAP51800 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
CLCNKAP51800 Y_RNA.86-201ENST00000363020 111 ntBASIC3.01□□□□□ -1.93
CLCNKAP51800 Y_RNA.88-201ENST00000363029 99 ntBASIC3.01□□□□□ -1.93
CLCNKAP51800 Y_RNA.231-201ENST00000364358 102 ntBASIC3.01□□□□□ -1.93
CLCNKAP51800 SNORA71.1-201ENST00000364523 117 ntBASIC3.01□□□□□ -1.93
CLCNKAP51800 RNU4-66P-201ENST00000365199 138 ntBASIC3.01□□□□□ -1.93
CLCNKAP51800 SNORA4.3-201ENST00000365564 137 ntBASIC3.01□□□□□ -1.93
CLCNKAP51800 RNU6-38P-201ENST00000384085 107 ntBASIC3.01□□□□□ -1.93
CLCNKAP51800 MIR514A2-201ENST00000385131 88 ntBASIC3.01□□□□□ -1.93
CLCNKAP51800 MIR514A3-201ENST00000385132 88 ntBASIC3.01□□□□□ -1.93
CLCNKAP51800 RNA5SP252-201ENST00000391131 119 ntBASIC3.01□□□□□ -1.93
CLCNKAP51800 CD3D-202ENST00000392884 476 ntTSL 2 BASIC3.01□□□□□ -1.93
CLCNKAP51800 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
CLCNKAP51800 FGF7P8-201ENST00000402994 292 ntBASIC3.01□□□□□ -1.93
CLCNKAP51800 AL356776.1-201ENST00000406574 447 ntBASIC3.01□□□□□ -1.93
CLCNKAP51800 MIR1289-1-201ENST00000408836 144 ntBASIC3.01□□□□□ -1.93
CLCNKAP51800 RN7SKP123-201ENST00000410732 291 ntBASIC3.01□□□□□ -1.93
CLCNKAP51800 OFD1P1Y-201ENST00000411756 1225 ntBASIC3.01□□□□□ -1.93
CLCNKAP51800 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
CLCNKAP51800 Z82210.1-201ENST00000440037 231 ntBASIC3.01□□□□□ -1.93
CLCNKAP51800 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC3.01□□□□□ -1.93
CLCNKAP51800 CECR9-201ENST00000453421 199 ntBASIC3.01□□□□□ -1.93
CLCNKAP51800 RNU6-333P-201ENST00000459117 107 ntBASIC3.01□□□□□ -1.93
CLCNKAP51800 RPS26P21-201ENST00000475397 348 ntBASIC3.01□□□□□ -1.93
CLCNKAP51800 AC018710.1-201ENST00000506509 158 ntBASIC3.01□□□□□ -1.93
CLCNKAP51800 AC009901.1-201ENST00000506703 541 ntBASIC3.01□□□□□ -1.93
CLCNKAP51800 AC006445.2-201ENST00000510061 472 ntBASIC3.01□□□□□ -1.93
CLCNKAP51800 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC3.01□□□□□ -1.93
CLCNKAP51800 RN7SKP272-201ENST00000516988 232 ntBASIC3.01□□□□□ -1.93
CLCNKAP51800 RNA5SP291-201ENST00000517222 105 ntBASIC3.01□□□□□ -1.93
CLCNKAP51800 SNORA31.26-201ENST00000517250 137 ntBASIC3.01□□□□□ -1.93
CLCNKAP51800 AC009812.2-201ENST00000517657 457 ntBASIC3.01□□□□□ -1.93
CLCNKAP51800 AF235103.2-201ENST00000525753 346 ntBASIC3.01□□□□□ -1.93
CLCNKAP51800 AL137161.1-201ENST00000532231 390 ntBASIC3.01□□□□□ -1.93
CLCNKAP51800 MDM2-233ENST00000545204 398 ntTSL 5 BASIC3.01□□□□□ -1.93
CLCNKAP51800 AL118558.2-201ENST00000556294 238 ntBASIC3.01□□□□□ -1.93
CLCNKAP51800 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC3.01□□□□□ -1.93
CLCNKAP51800 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC3.01□□□□□ -1.93
CLCNKAP51800 HSPE1P7-201ENST00000604681 321 ntBASIC3.01□□□□□ -1.93
CLCNKAP51800 HNRNPDLP4-201ENST00000605144 301 ntBASIC3.01□□□□□ -1.93
CLCNKAP51800 AL160281.1-201ENST00000605307 311 ntBASIC3.01□□□□□ -1.93
CLCNKAP51800 AC093732.2-201ENST00000607950 274 ntBASIC3.01□□□□□ -1.93
CLCNKAP51800 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC3.01□□□□□ -1.93
CLCNKAP51800 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC3.01□□□□□ -1.93
CLCNKAP51800 AC027309.3-201ENST00000623419 351 ntBASIC3.01□□□□□ -1.93
CLCNKAP51800 AC009033.1-201ENST00000624279 431 ntBASIC3.01□□□□□ -1.93
CLCNKAP51800 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC3□□□□□ -1.93
CLCNKAP51800 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC3□□□□□ -1.93
CLCNKAP51800 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
CLCNKAP51800 MIR22-201ENST00000362190 85 ntBASIC3□□□□□ -1.93
CLCNKAP51800 RNU6-525P-201ENST00000363685 104 ntBASIC3□□□□□ -1.93
CLCNKAP51800 RNU6-1127P-201ENST00000384580 107 ntBASIC3□□□□□ -1.93
CLCNKAP51800 MT-TL1-201ENST00000386347 75 ntBASIC3□□□□□ -1.93
CLCNKAP51800 RNU6ATAC40P-201ENST00000408580 137 ntBASIC3□□□□□ -1.93
CLCNKAP51800 Z92545.1-201ENST00000411782 234 ntBASIC3□□□□□ -1.93
CLCNKAP51800 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC3□□□□□ -1.93
CLCNKAP51800 SAR1AP4-201ENST00000429225 591 ntBASIC3□□□□□ -1.93
CLCNKAP51800 GPM6BP2-201ENST00000432046 144 ntBASIC3□□□□□ -1.93
CLCNKAP51800 MTCO3P18-201ENST00000440206 761 ntBASIC3□□□□□ -1.93
CLCNKAP51800 RPL23AP58-201ENST00000440453 469 ntBASIC3□□□□□ -1.93
CLCNKAP51800 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC3□□□□□ -1.93
CLCNKAP51800 GPM6BP1-201ENST00000446387 144 ntBASIC3□□□□□ -1.93
CLCNKAP51800 IGKV1OR-3-201ENST00000446944 348 ntBASIC3□□□□□ -1.93
CLCNKAP51800 FABP5P15-201ENST00000453566 214 ntBASIC3□□□□□ -1.93
CLCNKAP51800 RPL21P99-201ENST00000480369 423 ntBASIC3□□□□□ -1.93
CLCNKAP51800 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC3□□□□□ -1.93
CLCNKAP51800 AC025465.4-201ENST00000513422 638 ntBASIC3□□□□□ -1.93
CLCNKAP51800 UTP23-205ENST00000520733 369 ntTSL 3 BASIC3□□□□□ -1.93
CLCNKAP51800 ATP5F1P5-201ENST00000526403 760 ntBASIC3□□□□□ -1.93
CLCNKAP51800 AC118273.2-201ENST00000532092 465 ntBASIC3□□□□□ -1.93
CLCNKAP51800 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC3□□□□□ -1.93
CLCNKAP51800 BNIP3P6-201ENST00000549284 499 ntBASIC3□□□□□ -1.93
CLCNKAP51800 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC3□□□□□ -1.93
CLCNKAP51800 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC3□□□□□ -1.93
CLCNKAP51800 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC3□□□□□ -1.93
CLCNKAP51800 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC3□□□□□ -1.93
CLCNKAP51800 AC136601.2-201ENST00000604356 474 ntBASIC3□□□□□ -1.93
CLCNKAP51800 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC3□□□□□ -1.93
CLCNKAP51800 AC135507.2-201ENST00000612443 309 ntBASIC3□□□□□ -1.93
CLCNKAP51800 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC3□□□□□ -1.93
CLCNKAP51800 AC006504.8-201ENST00000621046 635 ntBASIC3□□□□□ -1.93
CLCNKAP51800 AC100810.6-201ENST00000638068 285 ntBASIC3□□□□□ -1.93
CLCNKAP51800 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC3□□□□□ -1.93
CLCNKAP51800 AL049641.1-201ENST00000441055 1948 ntBASIC2.99□□□□□ -1.93
CLCNKAP51800 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC2.99□□□□□ -1.93
CLCNKAP51800 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
CLCNKAP51800 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC2.99□□□□□ -1.93
CLCNKAP51800 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC2.99□□□□□ -1.93
CLCNKAP51800 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC2.99□□□□□ -1.93
CLCNKAP51800 Y_RNA.160-201ENST00000363677 92 ntBASIC2.99□□□□□ -1.93
CLCNKAP51800 RNU6-715P-201ENST00000365204 103 ntBASIC2.99□□□□□ -1.93
CLCNKAP51800 RNU6-332P-201ENST00000391193 108 ntBASIC2.99□□□□□ -1.93
CLCNKAP51800 RPL21P3-201ENST00000395517 478 ntBASIC2.99□□□□□ -1.93
CLCNKAP51800 UBA52P6-201ENST00000399822 382 ntBASIC2.99□□□□□ -1.93
CLCNKAP51800 Y_RNA.615-201ENST00000410769 117 ntBASIC2.99□□□□□ -1.93
CLCNKAP51800 SRIP2-201ENST00000428470 166 ntBASIC2.99□□□□□ -1.93
CLCNKAP51800 AC104332.2-201ENST00000429959 156 ntBASIC2.99□□□□□ -1.93
CLCNKAP51800 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC2.99□□□□□ -1.93
CLCNKAP51800 AL121601.2-201ENST00000438019 707 ntBASIC2.99□□□□□ -1.93
CLCNKAP51800 RPS15AP27-201ENST00000449183 343 ntBASIC2.99□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 84.9 ms