Protein–RNA interactions for Protein: P49959

MRE11, Double-strand break repair protein MRE11, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRE11P49959 AP000654.2-201ENST00000605633 586 ntBASIC4.16□□□□□ -1.74
MRE11P49959 U2.17-201ENST00000611454 95 ntBASIC4.16□□□□□ -1.74
MRE11P49959 AL355365.1-201ENST00000616480 294 ntBASIC4.16□□□□□ -1.74
MRE11P49959 AC007998.5-201ENST00000622938 237 ntBASIC4.16□□□□□ -1.74
MRE11P49959 FP236240.3-201ENST00000623061 327 ntBASIC4.16□□□□□ -1.74
MRE11P49959 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
MRE11P49959 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC4.16□□□□□ -1.74
MRE11P49959 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC4.16□□□□□ -1.74
MRE11P49959 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
MRE11P49959 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
MRE11P49959 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
MRE11P49959 AL035425.3-201ENST00000564206 4996 ntBASIC4.16□□□□□ -1.74
MRE11P49959 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
MRE11P49959 AL021368.2-201ENST00000606125 5352 ntBASIC4.16□□□□□ -1.74
MRE11P49959 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
MRE11P49959 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC4.15□□□□□ -1.74
MRE11P49959 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC4.15□□□□□ -1.74
MRE11P49959 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC4.15□□□□□ -1.74
MRE11P49959 MIR148B-201ENST00000362252 99 ntBASIC4.15□□□□□ -1.75
MRE11P49959 Y_RNA.133-201ENST00000363428 110 ntBASIC4.15□□□□□ -1.75
MRE11P49959 SNORA23-201ENST00000365128 182 ntBASIC4.15□□□□□ -1.75
MRE11P49959 RNU6-1181P-201ENST00000384191 106 ntBASIC4.15□□□□□ -1.75
MRE11P49959 AC110754.1-201ENST00000399740 601 ntBASIC4.15□□□□□ -1.75
MRE11P49959 AL031121.1-201ENST00000406553 254 ntBASIC4.15□□□□□ -1.75
MRE11P49959 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC4.15□□□□□ -1.75
MRE11P49959 HMGB1P12-201ENST00000438594 598 ntBASIC4.15□□□□□ -1.75
MRE11P49959 AC104058.1-201ENST00000448028 297 ntBASIC4.15□□□□□ -1.75
MRE11P49959 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC4.15□□□□□ -1.75
MRE11P49959 MTND5P22-201ENST00000458380 195 ntBASIC4.15□□□□□ -1.75
MRE11P49959 snoU13.3-201ENST00000459441 104 ntBASIC4.15□□□□□ -1.75
MRE11P49959 TRBV1-201ENST00000476502 284 ntBASIC4.15□□□□□ -1.75
MRE11P49959 TBCAP3-201ENST00000512475 312 ntBASIC4.15□□□□□ -1.75
MRE11P49959 AP006587.4-201ENST00000526053 529 ntBASIC4.15□□□□□ -1.75
MRE11P49959 AL355836.1-201ENST00000555951 870 ntBASIC4.15□□□□□ -1.75
MRE11P49959 AL157817.1-201ENST00000614264 790 ntBASIC4.15□□□□□ -1.75
MRE11P49959 AC010205.1-201ENST00000616668 449 ntBASIC4.15□□□□□ -1.75
MRE11P49959 AL078596.1-201ENST00000624856 447 ntBASIC4.15□□□□□ -1.75
MRE11P49959 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
MRE11P49959 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC4.14□□□□□ -1.75
MRE11P49959 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
MRE11P49959 AC007496.3-201ENST00000624987 3443 ntBASIC4.14□□□□□ -1.75
MRE11P49959 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
MRE11P49959 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
MRE11P49959 RNU6-463P-201ENST00000384340 107 ntBASIC4.14□□□□□ -1.75
MRE11P49959 RNU6-393P-201ENST00000384475 107 ntBASIC4.14□□□□□ -1.75
MRE11P49959 RNU6-310P-201ENST00000384655 107 ntBASIC4.14□□□□□ -1.75
MRE11P49959 RNU6-1105P-201ENST00000384774 107 ntBASIC4.14□□□□□ -1.75
MRE11P49959 UBA52P6-201ENST00000399822 382 ntBASIC4.14□□□□□ -1.75
MRE11P49959 RPLP0P7-201ENST00000416050 667 ntBASIC4.14□□□□□ -1.75
MRE11P49959 SSXP9-201ENST00000417503 292 ntBASIC4.14□□□□□ -1.75
MRE11P49959 ATG3P1-201ENST00000419507 911 ntBASIC4.14□□□□□ -1.75
MRE11P49959 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC4.14□□□□□ -1.75
MRE11P49959 SNAP23P1-201ENST00000433229 246 ntBASIC4.14□□□□□ -1.75
MRE11P49959 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC4.14□□□□□ -1.75
MRE11P49959 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC4.14□□□□□ -1.75
MRE11P49959 RNU7-167P-201ENST00000459160 62 ntBASIC4.14□□□□□ -1.75
MRE11P49959 AC092185.1-201ENST00000491371 97 ntBASIC4.14□□□□□ -1.75
MRE11P49959 SRP72-202ENST00000504757 745 ntTSL 2 BASIC4.14□□□□□ -1.75
MRE11P49959 PTP4A1P4-201ENST00000512479 322 ntBASIC4.14□□□□□ -1.75
MRE11P49959 SNORA14.1-201ENST00000516113 141 ntBASIC4.14□□□□□ -1.75
MRE11P49959 RNU6-390P-201ENST00000516259 103 ntBASIC4.14□□□□□ -1.75
MRE11P49959 RNU6-1213P-201ENST00000517075 94 ntBASIC4.14□□□□□ -1.75
MRE11P49959 RNU4ATAC17P-201ENST00000517272 120 ntBASIC4.14□□□□□ -1.75
MRE11P49959 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC4.14□□□□□ -1.75
MRE11P49959 TRAV37-201ENST00000553906 342 ntBASIC4.14□□□□□ -1.75
MRE11P49959 MTCO3P23-201ENST00000561363 289 ntBASIC4.14□□□□□ -1.75
MRE11P49959 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC4.14□□□□□ -1.75
MRE11P49959 MIR3941-201ENST00000582572 103 ntBASIC4.14□□□□□ -1.75
MRE11P49959 MIR5692C1-201ENST00000585309 91 ntBASIC4.14□□□□□ -1.75
MRE11P49959 ZNF432-203ENST00000597273 624 ntTSL 2 BASIC4.14□□□□□ -1.75
MRE11P49959 AC104763.2-201ENST00000604179 382 ntBASIC4.14□□□□□ -1.75
MRE11P49959 AL158032.1-201ENST00000605401 106 ntBASIC4.14□□□□□ -1.75
MRE11P49959 MIR8057-201ENST00000620957 69 ntBASIC4.14□□□□□ -1.75
MRE11P49959 AC091925.1-201ENST00000623204 462 ntBASIC4.14□□□□□ -1.75
MRE11P49959 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
MRE11P49959 RNU6-562P-201ENST00000362731 107 ntBASIC4.13□□□□□ -1.75
MRE11P49959 SNORD56.3-201ENST00000363507 71 ntBASIC4.13□□□□□ -1.75
MRE11P49959 RNU6-715P-201ENST00000365204 103 ntBASIC4.13□□□□□ -1.75
MRE11P49959 AL356057.3-201ENST00000402607 340 ntBASIC4.13□□□□□ -1.75
MRE11P49959 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC4.13□□□□□ -1.75
MRE11P49959 RNU6-712P-201ENST00000410558 100 ntBASIC4.13□□□□□ -1.75
MRE11P49959 Y_RNA.646-201ENST00000410980 101 ntBASIC4.13□□□□□ -1.75
MRE11P49959 RNA5SP111-201ENST00000411386 101 ntBASIC4.13□□□□□ -1.75
MRE11P49959 RNU2-71P-201ENST00000411395 189 ntBASIC4.13□□□□□ -1.75
MRE11P49959 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC4.13□□□□□ -1.75
MRE11P49959 AL035423.1-201ENST00000420331 213 ntBASIC4.13□□□□□ -1.75
MRE11P49959 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC4.13□□□□□ -1.75
MRE11P49959 OOSP1P1-201ENST00000423265 274 ntBASIC4.13□□□□□ -1.75
MRE11P49959 AL358176.2-201ENST00000425769 204 ntBASIC4.13□□□□□ -1.75
MRE11P49959 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC4.13□□□□□ -1.75
MRE11P49959 AL669831.1-202ENST00000428504 417 ntBASIC4.13□□□□□ -1.75
MRE11P49959 AC097713.2-201ENST00000430199 356 ntBASIC4.13□□□□□ -1.75
MRE11P49959 AC090774.1-201ENST00000435925 246 ntBASIC4.13□□□□□ -1.75
MRE11P49959 AC004866.2-201ENST00000438285 481 ntBASIC4.13□□□□□ -1.75
MRE11P49959 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC4.13□□□□□ -1.75
MRE11P49959 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC4.13□□□□□ -1.75
MRE11P49959 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC4.13□□□□□ -1.75
MRE11P49959 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC4.13□□□□□ -1.75
MRE11P49959 RNU2-69P-201ENST00000516061 100 ntBASIC4.13□□□□□ -1.75
MRE11P49959 RNU6-1069P-201ENST00000516612 133 ntBASIC4.13□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 99.1 ms