Protein–RNA interactions for Protein: P46736

BRCC3, Lys-63-specific deubiquitinase BRCC36, humanhuman

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3P46736 WASF1P1-201ENST00000447560 1131 ntBASIC2.51□□□□□ -2.01
BRCC3P46736 OFD1P4Y-201ENST00000455273 1179 ntBASIC2.51□□□□□ -2.01
BRCC3P46736 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC2.51□□□□□ -2.01
BRCC3P46736 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC2.51□□□□□ -2.01
BRCC3P46736 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC2.51□□□□□ -2.01
BRCC3P46736 RNU2-10P-201ENST00000516375 211 ntBASIC2.51□□□□□ -2.01
BRCC3P46736 MTCO2P4-201ENST00000517968 247 ntBASIC2.51□□□□□ -2.01
BRCC3P46736 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC2.51□□□□□ -2.01
BRCC3P46736 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC2.51□□□□□ -2.01
BRCC3P46736 AC084756.1-201ENST00000558237 606 ntTSL 5 BASIC2.51□□□□□ -2.01
BRCC3P46736 AC004223.2-201ENST00000590309 544 ntBASIC2.51□□□□□ -2.01
BRCC3P46736 AC008739.2-201ENST00000597006 317 ntBASIC2.51□□□□□ -2.01
BRCC3P46736 AC091805.2-201ENST00000603848 235 ntBASIC2.51□□□□□ -2.01
BRCC3P46736 AC010297.1-201ENST00000623948 149 ntBASIC2.51□□□□□ -2.01
BRCC3P46736 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC2.51□□□□□ -2.01
BRCC3P46736 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC2.51□□□□□ -2.01
BRCC3P46736 U2.21-201ENST00000637295 81 ntBASIC2.51□□□□□ -2.01
BRCC3P46736 MTND5P6-201ENST00000422338 1798 ntBASIC2.51□□□□□ -2.01
BRCC3P46736 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC2.51□□□□□ -2.01
BRCC3P46736 HSPE1P11-201ENST00000339579 310 ntBASIC2.5□□□□□ -2.01
BRCC3P46736 RNU6-1167P-201ENST00000363227 94 ntBASIC2.5□□□□□ -2.01
BRCC3P46736 Y_RNA.245-201ENST00000364493 95 ntBASIC2.5□□□□□ -2.01
BRCC3P46736 RNU6-946P-201ENST00000383878 107 ntBASIC2.5□□□□□ -2.01
BRCC3P46736 RNU6-74P-201ENST00000384235 107 ntBASIC2.5□□□□□ -2.01
BRCC3P46736 MIR1-2-201ENST00000384961 85 ntBASIC2.5□□□□□ -2.01
BRCC3P46736 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
BRCC3P46736 RNU6ATAC37P-201ENST00000408328 131 ntBASIC2.5□□□□□ -2.01
BRCC3P46736 RNA5SP425-201ENST00000410336 112 ntBASIC2.5□□□□□ -2.01
BRCC3P46736 MTCO3P41-201ENST00000414801 328 ntBASIC2.5□□□□□ -2.01
BRCC3P46736 AC104777.3-201ENST00000416350 545 ntTSL 3 BASIC2.5□□□□□ -2.01
BRCC3P46736 AL162254.1-202ENST00000419604 497 ntTSL 5 BASIC2.5□□□□□ -2.01
BRCC3P46736 PIGFP2-201ENST00000421400 651 ntBASIC2.5□□□□□ -2.01
BRCC3P46736 MTCO2P11-201ENST00000431069 680 ntBASIC2.5□□□□□ -2.01
BRCC3P46736 AL139415.2-201ENST00000431968 163 ntBASIC2.5□□□□□ -2.01
BRCC3P46736 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC2.5□□□□□ -2.01
BRCC3P46736 SNRPEP9-201ENST00000436794 238 ntBASIC2.5□□□□□ -2.01
BRCC3P46736 NEFMP1-201ENST00000443423 1006 ntBASIC2.5□□□□□ -2.01
BRCC3P46736 AL513124.1-201ENST00000450410 614 ntBASIC2.5□□□□□ -2.01
BRCC3P46736 C1DP4-201ENST00000455429 424 ntBASIC2.5□□□□□ -2.01
BRCC3P46736 MRPS17P3-201ENST00000465453 385 ntBASIC2.5□□□□□ -2.01
BRCC3P46736 LINC01487-202ENST00000490497 423 ntTSL 3 BASIC2.5□□□□□ -2.01
BRCC3P46736 RPL23AP49-201ENST00000492925 468 ntBASIC2.5□□□□□ -2.01
BRCC3P46736 RPL37P25-201ENST00000507308 276 ntBASIC2.5□□□□□ -2.01
BRCC3P46736 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC2.5□□□□□ -2.01
BRCC3P46736 AC113155.1-201ENST00000511141 769 ntBASIC2.5□□□□□ -2.01
BRCC3P46736 RN7SKP298-201ENST00000515950 94 ntBASIC2.5□□□□□ -2.01
BRCC3P46736 RNA5SP290-201ENST00000517133 127 ntBASIC2.5□□□□□ -2.01
BRCC3P46736 AC022634.1-201ENST00000520765 532 ntBASIC2.5□□□□□ -2.01
BRCC3P46736 AP003392.2-201ENST00000527269 208 ntBASIC2.5□□□□□ -2.01
BRCC3P46736 AC135279.1-201ENST00000543493 504 ntBASIC2.5□□□□□ -2.01
BRCC3P46736 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC2.5□□□□□ -2.01
BRCC3P46736 AC009558.1-201ENST00000561174 581 ntTSL 4 BASIC2.5□□□□□ -2.01
BRCC3P46736 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC2.5□□□□□ -2.01
BRCC3P46736 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC2.5□□□□□ -2.01
BRCC3P46736 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC2.5□□□□□ -2.01
BRCC3P46736 AC098826.3-201ENST00000603823 466 ntBASIC2.5□□□□□ -2.01
BRCC3P46736 AL161798.1-201ENST00000604630 131 ntBASIC2.5□□□□□ -2.01
BRCC3P46736 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC2.5□□□□□ -2.01
BRCC3P46736 DPY19L1-208ENST00000612226 607 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
BRCC3P46736 AC005332.10-201ENST00000612725 619 ntBASIC2.5□□□□□ -2.01
BRCC3P46736 AC130324.3-201ENST00000614165 542 ntBASIC2.5□□□□□ -2.01
BRCC3P46736 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC2.5□□□□□ -2.01
BRCC3P46736 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC2.5□□□□□ -2.01
BRCC3P46736 SRP54-214ENST00000630962 162 ntTSL 5 BASIC2.5□□□□□ -2.01
BRCC3P46736 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC2.5□□□□□ -2.01
BRCC3P46736 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
BRCC3P46736 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC2.49□□□□□ -2.01
BRCC3P46736 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC2.49□□□□□ -2.01
BRCC3P46736 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC2.49□□□□□ -2.01
BRCC3P46736 UBE2L2-201ENST00000254302 429 ntBASIC2.49□□□□□ -2.01
BRCC3P46736 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC2.49□□□□□ -2.01
BRCC3P46736 MIR21-201ENST00000362134 72 ntBASIC2.49□□□□□ -2.01
BRCC3P46736 Y_RNA.159-201ENST00000363674 87 ntBASIC2.49□□□□□ -2.01
BRCC3P46736 RNU1-91P-201ENST00000364746 163 ntBASIC2.49□□□□□ -2.01
BRCC3P46736 RN7SKP226-201ENST00000364912 300 ntBASIC2.49□□□□□ -2.01
BRCC3P46736 RNA5SP354-201ENST00000391247 136 ntBASIC2.49□□□□□ -2.01
BRCC3P46736 RNU2-16P-201ENST00000410712 136 ntBASIC2.49□□□□□ -2.01
BRCC3P46736 RNU2-8P-201ENST00000410727 190 ntBASIC2.49□□□□□ -2.01
BRCC3P46736 RNU6-193P-201ENST00000410977 107 ntBASIC2.49□□□□□ -2.01
BRCC3P46736 AC004870.3-202ENST00000412996 432 ntTSL 3 BASIC2.49□□□□□ -2.01
BRCC3P46736 AC098614.2-201ENST00000426040 255 ntBASIC2.49□□□□□ -2.01
BRCC3P46736 HMGB1P9-201ENST00000429856 646 ntBASIC2.49□□□□□ -2.01
BRCC3P46736 AC025038.1-201ENST00000433249 336 ntTSL 3 BASIC2.49□□□□□ -2.01
BRCC3P46736 MTCO3P5-201ENST00000433620 714 ntBASIC2.49□□□□□ -2.01
BRCC3P46736 AC132479.1-201ENST00000449160 144 ntBASIC2.49□□□□□ -2.01
BRCC3P46736 CECR9-201ENST00000453421 199 ntBASIC2.49□□□□□ -2.01
BRCC3P46736 FABP5P15-201ENST00000453566 214 ntBASIC2.49□□□□□ -2.01
BRCC3P46736 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC2.49□□□□□ -2.01
BRCC3P46736 RPL12P25-201ENST00000455592 494 ntBASIC2.49□□□□□ -2.01
BRCC3P46736 SNORD97-201ENST00000459187 142 ntBASIC2.49□□□□□ -2.01
BRCC3P46736 AC007182.2-201ENST00000489251 402 ntBASIC2.49□□□□□ -2.01
BRCC3P46736 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC2.49□□□□□ -2.01
BRCC3P46736 RPS29P21-201ENST00000496272 170 ntBASIC2.49□□□□□ -2.01
BRCC3P46736 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC2.49□□□□□ -2.01
BRCC3P46736 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC2.49□□□□□ -2.01
BRCC3P46736 AC091133.4-201ENST00000511142 308 ntBASIC2.49□□□□□ -2.01
BRCC3P46736 Y_RNA.655-201ENST00000515919 96 ntBASIC2.49□□□□□ -2.01
BRCC3P46736 RNU7-51P-201ENST00000516560 62 ntBASIC2.49□□□□□ -2.01
BRCC3P46736 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC2.49□□□□□ -2.01
BRCC3P46736 AC011979.2-201ENST00000527568 352 ntBASIC2.49□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 98.6 ms