Protein–RNA interactions for Protein: P31415

CASQ1, Calsequestrin-1, humanhuman

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASQ1P31415 LINC02246-204ENST00000625278 740 ntTSL 5 BASIC1.6□□□□□ -2.15
CASQ1P31415 AC099654.9-201ENST00000637055 678 ntBASIC1.6□□□□□ -2.15
CASQ1P31415 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.59□□□□□ -2.15
CASQ1P31415 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC1.59□□□□□ -2.15
CASQ1P31415 ZNF29P-201ENST00000225587 168 ntBASIC1.59□□□□□ -2.15
CASQ1P31415 C8orf59-201ENST00000321777 325 ntTSL 1 (best) BASIC1.59□□□□□ -2.15
CASQ1P31415 RNU6-1164P-201ENST00000364428 107 ntBASIC1.59□□□□□ -2.15
CASQ1P31415 MIR583-201ENST00000384846 75 ntBASIC1.59□□□□□ -2.15
CASQ1P31415 RNU1-78P-201ENST00000391248 165 ntBASIC1.59□□□□□ -2.15
CASQ1P31415 AC017099.1-201ENST00000448261 1028 ntBASIC1.59□□□□□ -2.15
CASQ1P31415 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC1.59□□□□□ -2.15
CASQ1P31415 MAST4-AS1-201ENST00000451496 777 ntTSL 2 BASIC1.59□□□□□ -2.15
CASQ1P31415 SSXP1-201ENST00000453640 473 ntBASIC1.59□□□□□ -2.15
CASQ1P31415 AC104564.1-201ENST00000493028 407 ntBASIC1.59□□□□□ -2.15
CASQ1P31415 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC1.59□□□□□ -2.15
CASQ1P31415 AC008549.1-201ENST00000512900 643 ntBASIC1.59□□□□□ -2.15
CASQ1P31415 AP003392.2-201ENST00000527269 208 ntBASIC1.59□□□□□ -2.15
CASQ1P31415 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC1.59□□□□□ -2.15
CASQ1P31415 MIR3912-201ENST00000577566 105 ntBASIC1.59□□□□□ -2.15
CASQ1P31415 AC060771.1-201ENST00000582031 164 ntBASIC1.59□□□□□ -2.15
CASQ1P31415 BX248123.2-201ENST00000606318 124 ntBASIC1.59□□□□□ -2.15
CASQ1P31415 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC1.59□□□□□ -2.16
CASQ1P31415 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.58□□□□□ -2.16
CASQ1P31415 CD80-202ENST00000383669 771 ntTSL 1 (best) BASIC1.58□□□□□ -2.16
CASQ1P31415 RPL17P35-201ENST00000432217 549 ntBASIC1.58□□□□□ -2.16
CASQ1P31415 MTCYBP42-201ENST00000444653 1130 ntBASIC1.58□□□□□ -2.16
CASQ1P31415 CHODL-AS1-201ENST00000447175 1117 ntTSL 2 BASIC1.58□□□□□ -2.16
CASQ1P31415 PCDH9-AS4-201ENST00000456459 436 ntTSL 3 BASIC1.58□□□□□ -2.16
CASQ1P31415 AMD1P1-201ENST00000457220 922 ntBASIC1.58□□□□□ -2.16
CASQ1P31415 snoU13.9-201ENST00000458927 103 ntBASIC1.58□□□□□ -2.16
CASQ1P31415 AC005908.1-201ENST00000468701 347 ntBASIC1.58□□□□□ -2.16
CASQ1P31415 AL121594.1-201ENST00000475906 575 ntBASIC1.58□□□□□ -2.16
CASQ1P31415 AC132942.1-201ENST00000486753 483 ntBASIC1.58□□□□□ -2.16
CASQ1P31415 AC104629.1-201ENST00000494226 508 ntBASIC1.58□□□□□ -2.16
CASQ1P31415 LAMTOR3P2-201ENST00000504479 232 ntBASIC1.58□□□□□ -2.16
CASQ1P31415 LINC02353-201ENST00000515181 849 ntTSL 1 (best) BASIC1.58□□□□□ -2.16
CASQ1P31415 RNU6-150P-201ENST00000516237 95 ntBASIC1.58□□□□□ -2.16
CASQ1P31415 RNU6-572P-201ENST00000516724 80 ntBASIC1.58□□□□□ -2.16
CASQ1P31415 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC1.58□□□□□ -2.16
CASQ1P31415 AC008269.2-201ENST00000561915 1105 ntBASIC1.58□□□□□ -2.16
CASQ1P31415 CLIC4P2-201ENST00000601934 717 ntBASIC1.58□□□□□ -2.16
CASQ1P31415 AL132822.1-201ENST00000617063 513 ntBASIC1.58□□□□□ -2.16
CASQ1P31415 AP000676.3-201ENST00000623299 569 ntBASIC1.58□□□□□ -2.16
CASQ1P31415 AC064859.1-201ENST00000624741 174 ntBASIC1.58□□□□□ -2.16
CASQ1P31415 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.58□□□□□ -2.16
CASQ1P31415 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC1.57□□□□□ -2.16
CASQ1P31415 LINC02510-201ENST00000509798 1576 ntTSL 1 (best) BASIC1.57□□□□□ -2.16
CASQ1P31415 SNORA48.1-201ENST00000390879 135 ntBASIC1.57□□□□□ -2.16
CASQ1P31415 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC1.57□□□□□ -2.16
CASQ1P31415 TRAPPC2P8-201ENST00000440676 396 ntBASIC1.57□□□□□ -2.16
CASQ1P31415 TRAPPC2P3-201ENST00000443200 321 ntBASIC1.57□□□□□ -2.16
CASQ1P31415 AL096829.2-201ENST00000446582 742 ntBASIC1.57□□□□□ -2.16
CASQ1P31415 AC099513.1-201ENST00000490423 301 ntBASIC1.57□□□□□ -2.16
CASQ1P31415 AC109329.1-201ENST00000518744 317 ntBASIC1.57□□□□□ -2.16
CASQ1P31415 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC1.57□□□□□ -2.16
CASQ1P31415 ASPH-224ENST00000522603 842 ntTSL 1 (best) BASIC1.57□□□□□ -2.16
CASQ1P31415 AP005433.1-201ENST00000582939 620 ntTSL 2 BASIC1.57□□□□□ -2.16
CASQ1P31415 GALNT1-205ENST00000591081 1120 ntTSL 1 (best) BASIC1.57□□□□□ -2.16
CASQ1P31415 SOX2-OT-224ENST00000595313 716 ntTSL 5 BASIC1.57□□□□□ -2.16
CASQ1P31415 AC090970.3-201ENST00000612566 866 ntBASIC1.57□□□□□ -2.16
CASQ1P31415 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC1.57□□□□□ -2.16
CASQ1P31415 AC023158.2-201ENST00000614876 543 ntBASIC1.57□□□□□ -2.16
CASQ1P31415 AL590808.1-201ENST00000618696 141 ntBASIC1.57□□□□□ -2.16
CASQ1P31415 USP12-203ENST00000620323 349 ntTSL 3 BASIC1.57□□□□□ -2.16
CASQ1P31415 AP003476.1-201ENST00000623984 516 ntBASIC1.57□□□□□ -2.16
CASQ1P31415 AC090517.3-201ENST00000625170 141 ntBASIC1.57□□□□□ -2.16
CASQ1P31415 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC1.56□□□□□ -2.16
CASQ1P31415 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC1.56□□□□□ -2.16
CASQ1P31415 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC1.56□□□□□ -2.16
CASQ1P31415 HTN1-201ENST00000246896 580 ntAPPRIS P1 TSL 1 (best) BASIC1.56□□□□□ -2.16
CASQ1P31415 CFAP97-201ENST00000296775 903 ntTSL 5 BASIC1.56□□□□□ -2.16
CASQ1P31415 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC1.56□□□□□ -2.16
CASQ1P31415 RNU6-1010P-201ENST00000362757 107 ntBASIC1.56□□□□□ -2.16
CASQ1P31415 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC1.56□□□□□ -2.16
CASQ1P31415 RNA5SP100-201ENST00000410903 110 ntBASIC1.56□□□□□ -2.16
CASQ1P31415 RNA5SP59-201ENST00000410922 110 ntBASIC1.56□□□□□ -2.16
CASQ1P31415 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC1.56□□□□□ -2.16
CASQ1P31415 PTENP1-201ENST00000447117 1215 ntBASIC1.56□□□□□ -2.16
CASQ1P31415 LINC01069-201ENST00000452933 546 ntTSL 5 BASIC1.56□□□□□ -2.16
CASQ1P31415 CHRM3-AS2-203ENST00000458325 895 ntTSL 2 BASIC1.56□□□□□ -2.16
CASQ1P31415 AC106821.1-201ENST00000502861 572 ntTSL 5 BASIC1.56□□□□□ -2.16
CASQ1P31415 RPF2P2-201ENST00000504693 896 ntBASIC1.56□□□□□ -2.16
CASQ1P31415 5S_rRNA.3-201ENST00000517021 110 ntBASIC1.56□□□□□ -2.16
CASQ1P31415 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC1.56□□□□□ -2.16
CASQ1P31415 AC026616.1-201ENST00000523157 525 ntBASIC1.56□□□□□ -2.16
CASQ1P31415 AC021451.1-201ENST00000523498 1129 ntBASIC1.56□□□□□ -2.16
CASQ1P31415 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC1.56□□□□□ -2.16
CASQ1P31415 LINC00301-204ENST00000532591 470 ntTSL 2 BASIC1.56□□□□□ -2.16
CASQ1P31415 AC022616.8-201ENST00000533569 253 ntBASIC1.56□□□□□ -2.16
CASQ1P31415 AC130415.1-201ENST00000547569 1010 ntTSL 4 BASIC1.56□□□□□ -2.16
CASQ1P31415 AC012378.1-201ENST00000561155 364 ntTSL 3 BASIC1.56□□□□□ -2.16
CASQ1P31415 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC1.56□□□□□ -2.16
CASQ1P31415 WISP1-OT1-201ENST00000602893 642 ntBASIC1.56□□□□□ -2.16
CASQ1P31415 AC097468.3-201ENST00000607956 456 ntBASIC1.56□□□□□ -2.16
CASQ1P31415 AC093788.1-201ENST00000609356 927 ntBASIC1.56□□□□□ -2.16
CASQ1P31415 AC004908.3-201ENST00000610248 625 ntBASIC1.56□□□□□ -2.16
CASQ1P31415 5S_rRNA.19-201ENST00000612131 110 ntBASIC1.56□□□□□ -2.16
CASQ1P31415 5S_rRNA.18-201ENST00000621941 110 ntBASIC1.56□□□□□ -2.16
CASQ1P31415 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC1.56□□□□□ -2.16
CASQ1P31415 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC1.56□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 117.9 ms