Protein–RNA interactions for Protein: P27658

COL8A1, Collagen alpha-1(VIII) chain, humanhuman

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1P27658 AC010095.1-201ENST00000443543 144 ntBASIC4.37□□□□□ -1.71
COL8A1P27658 Z73495.1-201ENST00000444982 147 ntTSL 3 BASIC4.37□□□□□ -1.71
COL8A1P27658 RPS27P1-201ENST00000450552 247 ntBASIC4.37□□□□□ -1.71
COL8A1P27658 TRBV2-201ENST00000455382 421 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
COL8A1P27658 RNU6-625P-201ENST00000459412 107 ntBASIC4.37□□□□□ -1.71
COL8A1P27658 AC011276.1-201ENST00000469688 323 ntBASIC4.37□□□□□ -1.71
COL8A1P27658 SCARNA8-201ENST00000515924 131 ntBASIC4.37□□□□□ -1.71
COL8A1P27658 RN7SKP277-201ENST00000516895 283 ntBASIC4.37□□□□□ -1.71
COL8A1P27658 RNU6-762P-201ENST00000517107 102 ntBASIC4.37□□□□□ -1.71
COL8A1P27658 AL355076.2-201ENST00000555736 544 ntTSL 5 BASIC4.37□□□□□ -1.71
COL8A1P27658 AC093591.2-201ENST00000565254 3843 ntBASIC4.37□□□□□ -1.71
COL8A1P27658 AL391813.1-201ENST00000603098 260 ntBASIC4.37□□□□□ -1.71
COL8A1P27658 AL391903.3-201ENST00000612158 163 ntBASIC4.37□□□□□ -1.71
COL8A1P27658 AC004467.1-201ENST00000615678 330 ntBASIC4.37□□□□□ -1.71
COL8A1P27658 UGP2-230ENST00000626380 276 ntTSL 5 BASIC4.37□□□□□ -1.71
COL8A1P27658 LRRC37A-203ENST00000496930 3860 ntTSL 2 BASIC4.37□□□□□ -1.71
COL8A1P27658 ZNF611-201ENST00000319783 3153 ntAPPRIS P1 TSL 2 BASIC4.37□□□□□ -1.71
COL8A1P27658 LEPR-208ENST00000616738 5081 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
COL8A1P27658 NBPF9-208ENST00000621074 4302 ntTSL 5 BASIC4.37□□□□□ -1.71
COL8A1P27658 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC4.37□□□□□ -1.71
COL8A1P27658 OR6B1-202ENST00000641698 5153 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
COL8A1P27658 ZNF782-208ENST00000535338 3296 ntAPPRIS P1 TSL 3 BASIC4.37□□□□□ -1.71
COL8A1P27658 AP002518.1-201ENST00000534904 3837 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
COL8A1P27658 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC4.37□□□□□ -1.71
COL8A1P27658 KLHL4-202ENST00000373119 5818 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
COL8A1P27658 ZNF347-202ENST00000452676 4553 ntAPPRIS ALT2 TSL 2 BASIC4.36□□□□□ -1.71
COL8A1P27658 TRPC4-203ENST00000358477 2955 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
COL8A1P27658 CASP10-204ENST00000346817 3926 ntAPPRIS ALT2 TSL 5 BASIC4.36□□□□□ -1.71
COL8A1P27658 AP005212.5-201ENST00000577614 3505 ntTSL 5 BASIC4.36□□□□□ -1.71
COL8A1P27658 AASDH-201ENST00000205214 3590 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
COL8A1P27658 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC4.36□□□□□ -1.71
COL8A1P27658 ZNF83-202ENST00000536937 2726 ntAPPRIS P1 TSL 2 BASIC4.36□□□□□ -1.71
COL8A1P27658 MIR129-1-201ENST00000384972 72 ntBASIC4.36□□□□□ -1.71
COL8A1P27658 Y_RNA.584-201ENST00000391090 114 ntBASIC4.36□□□□□ -1.71
COL8A1P27658 SNORA40C-201ENST00000391285 128 ntBASIC4.36□□□□□ -1.71
COL8A1P27658 SNORA75.5-201ENST00000391291 81 ntBASIC4.36□□□□□ -1.71
COL8A1P27658 SNORA11.1-201ENST00000408133 129 ntBASIC4.36□□□□□ -1.71
COL8A1P27658 RNU2-54P-201ENST00000410299 190 ntBASIC4.36□□□□□ -1.71
COL8A1P27658 AL354726.1-201ENST00000411981 402 ntTSL 2 BASIC4.36□□□□□ -1.71
COL8A1P27658 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC4.36□□□□□ -1.71
COL8A1P27658 RNU6-453P-201ENST00000516819 85 ntBASIC4.36□□□□□ -1.71
COL8A1P27658 snoU109.6-201ENST00000516831 118 ntBASIC4.36□□□□□ -1.71
COL8A1P27658 AC016256.1-201ENST00000547971 354 ntBASIC4.36□□□□□ -1.71
COL8A1P27658 ARF4P1-201ENST00000605447 541 ntBASIC4.36□□□□□ -1.71
COL8A1P27658 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC4.36□□□□□ -1.71
COL8A1P27658 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC4.36□□□□□ -1.71
COL8A1P27658 AC091932.3-201ENST00000624223 323 ntBASIC4.36□□□□□ -1.71
COL8A1P27658 PSMD5-AS1-215ENST00000640622 205 ntBASIC4.36□□□□□ -1.71
COL8A1P27658 OBSCN-214ENST00000636875 23907 ntTSL 5 BASIC4.36□□□□□ -1.71
COL8A1P27658 ZNF28-204ENST00000457749 4556 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
COL8A1P27658 CLUL1-213ENST00000620089 1947 ntTSL 5 BASIC4.36□□□□□ -1.71
COL8A1P27658 SCN1A-218ENST00000640036 8131 ntAPPRIS ALT1 TSL 5 BASIC4.36□□□□□ -1.71
COL8A1P27658 PCAT14-202ENST00000627127 3935 ntBASIC4.36□□□□□ -1.71
COL8A1P27658 OR10G4-203ENST00000641722 3301 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
COL8A1P27658 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
COL8A1P27658 KTN1-202ENST00000395308 4134 ntAPPRIS ALT2 TSL 1 (best) BASIC4.36□□□□□ -1.71
COL8A1P27658 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC4.35□□□□□ -1.71
COL8A1P27658 MARCH1-202ENST00000339875 2476 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
COL8A1P27658 ERC2-201ENST00000288221 6138 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
COL8A1P27658 NOSTRIN-206ENST00000444448 2537 ntTSL 5 BASIC4.35□□□□□ -1.71
COL8A1P27658 AL445623.2-201ENST00000640307 4805 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
COL8A1P27658 BCLAF1-201ENST00000353331 7110 ntTSL 5 BASIC4.35□□□□□ -1.71
COL8A1P27658 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC4.35□□□□□ -1.71
COL8A1P27658 CROT-204ENST00000442291 1993 ntTSL 5 BASIC4.35□□□□□ -1.71
COL8A1P27658 IPO5-201ENST00000261574 6003 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
COL8A1P27658 RAP1B-201ENST00000250559 13438 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
COL8A1P27658 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
COL8A1P27658 RNU6-905P-201ENST00000384434 107 ntBASIC4.35□□□□□ -1.71
COL8A1P27658 RNU6-880P-201ENST00000384526 107 ntBASIC4.35□□□□□ -1.71
COL8A1P27658 MIR15B-201ENST00000385045 98 ntBASIC4.35□□□□□ -1.71
COL8A1P27658 BX510359.2-201ENST00000417920 305 ntBASIC4.35□□□□□ -1.71
COL8A1P27658 RPL21P66-201ENST00000426566 466 ntBASIC4.35□□□□□ -1.71
COL8A1P27658 HMGN2P27-201ENST00000427352 270 ntBASIC4.35□□□□□ -1.71
COL8A1P27658 RPL12P46-201ENST00000436610 195 ntBASIC4.35□□□□□ -1.71
COL8A1P27658 AC092798.1-201ENST00000458542 409 ntBASIC4.35□□□□□ -1.71
COL8A1P27658 RN7SL188P-201ENST00000469842 285 ntBASIC4.35□□□□□ -1.71
COL8A1P27658 AC146944.2-203ENST00000502493 354 ntBASIC4.35□□□□□ -1.71
COL8A1P27658 AC139495.1-202ENST00000513164 354 ntBASIC4.35□□□□□ -1.71
COL8A1P27658 SNORA31.9-201ENST00000516429 84 ntBASIC4.35□□□□□ -1.71
COL8A1P27658 AC023632.4-201ENST00000517783 191 ntBASIC4.35□□□□□ -1.71
COL8A1P27658 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC4.35□□□□□ -1.71
COL8A1P27658 AC018448.1-201ENST00000552843 316 ntBASIC4.35□□□□□ -1.71
COL8A1P27658 ERVK-28-203ENST00000600419 457 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
COL8A1P27658 AC010999.1-201ENST00000611856 324 ntBASIC4.35□□□□□ -1.71
COL8A1P27658 5_8S_rRNA.1-201ENST00000614365 152 ntBASIC4.35□□□□□ -1.71
COL8A1P27658 AL391261.4-201ENST00000616012 481 ntBASIC4.35□□□□□ -1.71
COL8A1P27658 AC074140.1-201ENST00000621617 208 ntBASIC4.35□□□□□ -1.71
COL8A1P27658 AC241585.2-209ENST00000638217 143 ntBASIC4.35□□□□□ -1.71
COL8A1P27658 PCDH9-203ENST00000456367 5072 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
COL8A1P27658 HMCN1-201ENST00000271588 18208 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
COL8A1P27658 OTOGL-204ENST00000547103 8032 ntAPPRIS ALT2 TSL 5 BASIC4.35□□□□□ -1.71
COL8A1P27658 SEC31A-209ENST00000500777 3610 ntTSL 5 BASIC4.35□□□□□ -1.71
COL8A1P27658 C5orf42-201ENST00000425232 11199 ntAPPRIS P2 TSL 5 BASIC4.35□□□□□ -1.71
COL8A1P27658 RASAL2-203ENST00000462775 14453 ntAPPRIS ALT2 TSL 1 (best) BASIC4.35□□□□□ -1.71
COL8A1P27658 RAB18-209ENST00000621805 4894 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
COL8A1P27658 LRRC53-201ENST00000294635 3859 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
COL8A1P27658 ATP7A-202ENST00000343533 8289 ntTSL 5 BASIC4.35□□□□□ -1.71
COL8A1P27658 ANKRD34C-201ENST00000421388 4951 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
COL8A1P27658 C6orf10-207ENST00000533191 2170 ntAPPRIS ALT2 TSL 1 (best) BASIC4.34□□□□□ -1.71
COL8A1P27658 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC4.34□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 117.3 ms