Protein–RNA interactions for Protein: P23763

VAMP1, Vesicle-associated membrane protein 1, humanhuman

Predictions only

Length 118 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1P23763 Y_RNA.152-201ENST00000363578 100 ntBASIC4.04□□□□□ -1.76
VAMP1P23763 RNU6-1210P-201ENST00000363775 107 ntBASIC4.04□□□□□ -1.76
VAMP1P23763 SNORA51.11-201ENST00000384442 131 ntBASIC4.04□□□□□ -1.76
VAMP1P23763 DEFB115-201ENST00000400552 267 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
VAMP1P23763 MIR208B-201ENST00000401172 77 ntBASIC4.04□□□□□ -1.76
VAMP1P23763 RNU6ATAC18P-201ENST00000408413 101 ntBASIC4.04□□□□□ -1.76
VAMP1P23763 AL157378.1-201ENST00000424506 265 ntTSL 5 BASIC4.04□□□□□ -1.76
VAMP1P23763 AP000907.1-201ENST00000428428 510 ntBASIC4.04□□□□□ -1.76
VAMP1P23763 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC4.04□□□□□ -1.76
VAMP1P23763 TTTY23B-202ENST00000451467 512 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
VAMP1P23763 TTTY23-201ENST00000452889 512 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
VAMP1P23763 APOA2-207ENST00000470459 416 ntTSL 5 BASIC4.04□□□□□ -1.76
VAMP1P23763 AC098851.1-201ENST00000476561 570 ntTSL 4 BASIC4.04□□□□□ -1.76
VAMP1P23763 RPS21P4-201ENST00000487122 248 ntBASIC4.04□□□□□ -1.76
VAMP1P23763 AC025445.1-201ENST00000502728 300 ntBASIC4.04□□□□□ -1.76
VAMP1P23763 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC4.04□□□□□ -1.76
VAMP1P23763 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC4.04□□□□□ -1.76
VAMP1P23763 RNU2-53P-201ENST00000516257 147 ntBASIC4.04□□□□□ -1.76
VAMP1P23763 AC010547.6-201ENST00000571789 193 ntBASIC4.04□□□□□ -1.76
VAMP1P23763 AC103810.1-201ENST00000579873 453 ntBASIC4.04□□□□□ -1.76
VAMP1P23763 SNORA74C-1-201ENST00000580726 201 ntBASIC4.04□□□□□ -1.76
VAMP1P23763 MIR5188-201ENST00000583467 113 ntBASIC4.04□□□□□ -1.76
VAMP1P23763 AL133393.1-201ENST00000603277 287 ntBASIC4.04□□□□□ -1.76
VAMP1P23763 Z98751.3-201ENST00000604447 521 ntBASIC4.04□□□□□ -1.76
VAMP1P23763 AL034555.1-201ENST00000604816 211 ntBASIC4.04□□□□□ -1.76
VAMP1P23763 MIR7109-201ENST00000613748 65 ntBASIC4.04□□□□□ -1.76
VAMP1P23763 AC087588.2-201ENST00000617667 426 ntBASIC4.04□□□□□ -1.76
VAMP1P23763 MIR8080-201ENST00000622224 89 ntBASIC4.04□□□□□ -1.76
VAMP1P23763 AL078596.1-201ENST00000624856 447 ntBASIC4.04□□□□□ -1.76
VAMP1P23763 AC093495.1-217ENST00000627385 428 ntTSL 5 BASIC4.04□□□□□ -1.76
VAMP1P23763 DEPDC1-202ENST00000456315 5331 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
VAMP1P23763 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
VAMP1P23763 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
VAMP1P23763 AP003122.5-201ENST00000527668 3766 ntBASIC4.04□□□□□ -1.76
VAMP1P23763 FAM35A-201ENST00000298784 3402 ntAPPRIS P1 TSL 2 BASIC4.04□□□□□ -1.76
VAMP1P23763 C11orf65-208ENST00000615746 2711 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
VAMP1P23763 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC4.03□□□□□ -1.76
VAMP1P23763 RNU6-450P-201ENST00000364654 107 ntBASIC4.03□□□□□ -1.76
VAMP1P23763 Y_RNA.319-201ENST00000365138 92 ntBASIC4.03□□□□□ -1.76
VAMP1P23763 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
VAMP1P23763 MIR320B2-201ENST00000408479 138 ntBASIC4.03□□□□□ -1.76
VAMP1P23763 AL049712.1-201ENST00000418739 872 ntTSL 3 BASIC4.03□□□□□ -1.76
VAMP1P23763 DPH3P2-201ENST00000422618 250 ntBASIC4.03□□□□□ -1.76
VAMP1P23763 AC091286.1-201ENST00000431233 461 ntBASIC4.03□□□□□ -1.76
VAMP1P23763 RN7SL168P-201ENST00000463821 279 ntBASIC4.03□□□□□ -1.76
VAMP1P23763 TAF8-207ENST00000482432 556 ntTSL 2 BASIC4.03□□□□□ -1.76
VAMP1P23763 RNU5F-2P-201ENST00000516066 82 ntBASIC4.03□□□□□ -1.76
VAMP1P23763 SCARNA17.1-201ENST00000516211 143 ntBASIC4.03□□□□□ -1.76
VAMP1P23763 SCARNA17.2-201ENST00000516334 143 ntBASIC4.03□□□□□ -1.76
VAMP1P23763 MIR2355-201ENST00000517199 87 ntBASIC4.03□□□□□ -1.76
VAMP1P23763 RNU6-709P-201ENST00000517257 104 ntBASIC4.03□□□□□ -1.76
VAMP1P23763 AC022868.1-201ENST00000517767 391 ntBASIC4.03□□□□□ -1.76
VAMP1P23763 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC4.03□□□□□ -1.76
VAMP1P23763 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC4.03□□□□□ -1.76
VAMP1P23763 AC079598.5-201ENST00000547460 117 ntBASIC4.03□□□□□ -1.76
VAMP1P23763 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC4.03□□□□□ -1.76
VAMP1P23763 MIR1273E-201ENST00000581165 102 ntBASIC4.03□□□□□ -1.76
VAMP1P23763 MIR4271-201ENST00000582451 67 ntBASIC4.03□□□□□ -1.76
VAMP1P23763 AC008738.1-201ENST00000590117 375 ntTSL 5 BASIC4.03□□□□□ -1.76
VAMP1P23763 SNORD58B-201ENST00000607313 66 ntBASIC4.03□□□□□ -1.76
VAMP1P23763 RDM1-215ENST00000612980 501 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
VAMP1P23763 SCARNA17.4-201ENST00000614296 143 ntBASIC4.03□□□□□ -1.76
VAMP1P23763 HOTTIP_3.1-201ENST00000619957 337 ntBASIC4.03□□□□□ -1.76
VAMP1P23763 MIR6813-201ENST00000621638 56 ntBASIC4.03□□□□□ -1.76
VAMP1P23763 SNAP23-223ENST00000627440 210 ntTSL 5 BASIC4.03□□□□□ -1.76
VAMP1P23763 ZEB1-202ENST00000361642 5990 ntAPPRIS ALT2 TSL 1 (best) BASIC4.03□□□□□ -1.76
VAMP1P23763 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC4.03□□□□□ -1.76
VAMP1P23763 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.03□□□□□ -1.76
VAMP1P23763 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC4.02□□□□□ -1.77
VAMP1P23763 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
VAMP1P23763 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
VAMP1P23763 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC4.02□□□□□ -1.77
VAMP1P23763 RNU5B-2P-201ENST00000363036 113 ntBASIC4.02□□□□□ -1.77
VAMP1P23763 RNU6-17P-201ENST00000384245 107 ntBASIC4.02□□□□□ -1.77
VAMP1P23763 SNORA67-201ENST00000384423 137 ntBASIC4.02□□□□□ -1.77
VAMP1P23763 RNU6-18P-201ENST00000384527 107 ntBASIC4.02□□□□□ -1.77
VAMP1P23763 RNU6-1093P-201ENST00000391194 107 ntBASIC4.02□□□□□ -1.77
VAMP1P23763 AL138878.1-201ENST00000405131 347 ntBASIC4.02□□□□□ -1.77
VAMP1P23763 RPS29P14-201ENST00000431518 171 ntBASIC4.02□□□□□ -1.77
VAMP1P23763 LINC02257-202ENST00000433576 720 ntTSL 5 BASIC4.02□□□□□ -1.77
VAMP1P23763 AL162384.1-201ENST00000437881 499 ntTSL 2 BASIC4.02□□□□□ -1.77
VAMP1P23763 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC4.02□□□□□ -1.77
VAMP1P23763 AC096644.1-201ENST00000446169 390 ntTSL 3 BASIC4.02□□□□□ -1.77
VAMP1P23763 AC108022.1-201ENST00000493466 478 ntBASIC4.02□□□□□ -1.77
VAMP1P23763 HMGB1P35-201ENST00000503360 598 ntBASIC4.02□□□□□ -1.77
VAMP1P23763 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC4.02□□□□□ -1.77
VAMP1P23763 SNORA31.6-201ENST00000516241 130 ntBASIC4.02□□□□□ -1.77
VAMP1P23763 RNU6-911P-201ENST00000516523 104 ntBASIC4.02□□□□□ -1.77
VAMP1P23763 AC022616.4-201ENST00000522985 181 ntBASIC4.02□□□□□ -1.77
VAMP1P23763 AC040926.1-201ENST00000530195 238 ntBASIC4.02□□□□□ -1.77
VAMP1P23763 AC007458.1-201ENST00000542812 373 ntBASIC4.02□□□□□ -1.77
VAMP1P23763 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC4.02□□□□□ -1.77
VAMP1P23763 CYP4A27P-201ENST00000567218 190 ntBASIC4.02□□□□□ -1.77
VAMP1P23763 AC090617.3-201ENST00000573670 475 ntBASIC4.02□□□□□ -1.77
VAMP1P23763 AC138207.8-204ENST00000579588 527 ntBASIC4.02□□□□□ -1.77
VAMP1P23763 FAM27B-201ENST00000610601 213 ntBASIC4.02□□□□□ -1.77
VAMP1P23763 C1orf195-202ENST00000625027 441 ntTSL 5 BASIC4.02□□□□□ -1.77
VAMP1P23763 TPRG1-201ENST00000345063 5479 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
VAMP1P23763 LINC02471-203ENST00000641941 4752 ntBASIC4.02□□□□□ -1.77
VAMP1P23763 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC4.02□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 105.1 ms