Protein–RNA interactions for Protein: P19013

KRT4, Keratin, type II cytoskeletal 4, humanhuman

Predictions only

Length 534 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT4P19013 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC3.71□□□□□ -1.82
KRT4P19013 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC3.7□□□□□ -1.82
KRT4P19013 CCDC91-201ENST00000381259 2334 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
KRT4P19013 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
KRT4P19013 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
KRT4P19013 SNORA20.1-201ENST00000364790 130 ntBASIC3.7□□□□□ -1.82
KRT4P19013 RNU6-715P-201ENST00000365204 103 ntBASIC3.7□□□□□ -1.82
KRT4P19013 SMIM11P1-201ENST00000369586 178 ntBASIC3.7□□□□□ -1.82
KRT4P19013 RFX3-203ENST00000381984 364 ntTSL 3 BASIC3.7□□□□□ -1.82
KRT4P19013 RNU6-1074P-201ENST00000383995 104 ntBASIC3.7□□□□□ -1.82
KRT4P19013 RNU6-306P-201ENST00000384617 107 ntBASIC3.7□□□□□ -1.82
KRT4P19013 RPS26P8-201ENST00000393490 348 ntBASIC3.7□□□□□ -1.82
KRT4P19013 RNU4-65P-201ENST00000410473 140 ntBASIC3.7□□□□□ -1.82
KRT4P19013 RNA5SP111-201ENST00000411386 101 ntBASIC3.7□□□□□ -1.82
KRT4P19013 AC096664.2-201ENST00000411843 406 ntBASIC3.7□□□□□ -1.82
KRT4P19013 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
KRT4P19013 RPL21P2-201ENST00000440049 481 ntBASIC3.7□□□□□ -1.82
KRT4P19013 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC3.7□□□□□ -1.82
KRT4P19013 NUTF2P3-201ENST00000448540 384 ntBASIC3.7□□□□□ -1.82
KRT4P19013 FABP5P13-201ENST00000452144 328 ntBASIC3.7□□□□□ -1.82
KRT4P19013 HMGN2P16-201ENST00000456802 261 ntBASIC3.7□□□□□ -1.82
KRT4P19013 AC087884.1-201ENST00000469738 328 ntBASIC3.7□□□□□ -1.82
KRT4P19013 AC093852.1-201ENST00000503587 266 ntBASIC3.7□□□□□ -1.82
KRT4P19013 MLLT10P2-201ENST00000506434 249 ntBASIC3.7□□□□□ -1.82
KRT4P19013 SNORA40.14-201ENST00000516543 86 ntBASIC3.7□□□□□ -1.82
KRT4P19013 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC3.7□□□□□ -1.82
KRT4P19013 AL137100.2-201ENST00000555786 315 ntBASIC3.7□□□□□ -1.82
KRT4P19013 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC3.7□□□□□ -1.82
KRT4P19013 MIR3128-201ENST00000581957 66 ntBASIC3.7□□□□□ -1.82
KRT4P19013 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC3.7□□□□□ -1.82
KRT4P19013 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC3.7□□□□□ -1.82
KRT4P19013 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC3.7□□□□□ -1.82
KRT4P19013 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
KRT4P19013 5S_rRNA.12-201ENST00000617631 107 ntBASIC3.7□□□□□ -1.82
KRT4P19013 AC137590.2-201ENST00000619709 240 ntBASIC3.7□□□□□ -1.82
KRT4P19013 AL589994.2-201ENST00000621124 579 ntBASIC3.7□□□□□ -1.82
KRT4P19013 AC007998.5-201ENST00000622938 237 ntBASIC3.7□□□□□ -1.82
KRT4P19013 AC091925.2-201ENST00000625059 256 ntBASIC3.7□□□□□ -1.82
KRT4P19013 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC3.7□□□□□ -1.82
KRT4P19013 RLIMP1-201ENST00000339626 1680 ntBASIC3.7□□□□□ -1.82
KRT4P19013 THOC1-221ENST00000631280 2011 ntTSL 5 BASIC3.7□□□□□ -1.82
KRT4P19013 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC3.69□□□□□ -1.82
KRT4P19013 AL672296.1-201ENST00000427780 2158 ntBASIC3.69□□□□□ -1.82
KRT4P19013 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC3.69□□□□□ -1.82
KRT4P19013 OR56A5-201ENST00000340110 738 ntBASIC3.69□□□□□ -1.82
KRT4P19013 ACEA_U3.1-201ENST00000363057 217 ntBASIC3.69□□□□□ -1.82
KRT4P19013 RNA5SP42-201ENST00000364278 115 ntBASIC3.69□□□□□ -1.82
KRT4P19013 Y_RNA.314-201ENST00000365114 102 ntBASIC3.69□□□□□ -1.82
KRT4P19013 RNU6-33P-201ENST00000384793 107 ntBASIC3.69□□□□□ -1.82
KRT4P19013 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
KRT4P19013 AP000567.1-201ENST00000406413 156 ntBASIC3.69□□□□□ -1.82
KRT4P19013 AC092447.6-201ENST00000414578 210 ntBASIC3.69□□□□□ -1.82
KRT4P19013 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC3.69□□□□□ -1.82
KRT4P19013 UBE2FP1-201ENST00000416536 447 ntBASIC3.69□□□□□ -1.82
KRT4P19013 MRPS18CP6-201ENST00000423587 223 ntBASIC3.69□□□□□ -1.82
KRT4P19013 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC3.69□□□□□ -1.82
KRT4P19013 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC3.69□□□□□ -1.82
KRT4P19013 HMGB3P17-201ENST00000504195 649 ntBASIC3.69□□□□□ -1.82
KRT4P19013 AC010255.1-201ENST00000504829 731 ntTSL 5 BASIC3.69□□□□□ -1.82
KRT4P19013 LEF1-218ENST00000512172 598 ntTSL 2 BASIC3.69□□□□□ -1.82
KRT4P19013 RN7SKP60-201ENST00000516985 239 ntBASIC3.69□□□□□ -1.82
KRT4P19013 IGKV2D-19-201ENST00000523346 262 ntBASIC3.69□□□□□ -1.82
KRT4P19013 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
KRT4P19013 AC008011.1-201ENST00000545989 227 ntBASIC3.69□□□□□ -1.82
KRT4P19013 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC3.69□□□□□ -1.82
KRT4P19013 RRN3P3-201ENST00000549207 578 ntBASIC3.69□□□□□ -1.82
KRT4P19013 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC3.69□□□□□ -1.82
KRT4P19013 AL355095.1-201ENST00000554451 539 ntTSL 2 BASIC3.69□□□□□ -1.82
KRT4P19013 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC3.69□□□□□ -1.82
KRT4P19013 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC3.69□□□□□ -1.82
KRT4P19013 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
KRT4P19013 MTND4LP5-201ENST00000605152 292 ntBASIC3.69□□□□□ -1.82
KRT4P19013 TRIQK-211ENST00000520430 1829 ntAPPRIS P1 TSL 2 BASIC3.69□□□□□ -1.82
KRT4P19013 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC3.69□□□□□ -1.82
KRT4P19013 MFSD8-236ENST00000641509 4050 ntBASIC3.69□□□□□ -1.82
KRT4P19013 AC091152.2-201ENST00000591628 2569 ntBASIC3.68□□□□□ -1.82
KRT4P19013 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC3.68□□□□□ -1.82
KRT4P19013 Y_RNA.14-201ENST00000362415 103 ntBASIC3.68□□□□□ -1.82
KRT4P19013 MT-TW-201ENST00000387382 68 ntBASIC3.68□□□□□ -1.82
KRT4P19013 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC3.68□□□□□ -1.82
KRT4P19013 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC3.68□□□□□ -1.82
KRT4P19013 UBE2V1P4-201ENST00000425374 344 ntBASIC3.68□□□□□ -1.82
KRT4P19013 AL158071.1-201ENST00000430315 461 ntBASIC3.68□□□□□ -1.82
KRT4P19013 ARHGEF7-AS1-201ENST00000435037 321 ntTSL 3 BASIC3.68□□□□□ -1.82
KRT4P19013 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC3.68□□□□□ -1.82
KRT4P19013 AC010655.1-201ENST00000449336 292 ntBASIC3.68□□□□□ -1.82
KRT4P19013 RPS29P33-201ENST00000456717 146 ntBASIC3.68□□□□□ -1.82
KRT4P19013 U3.44-201ENST00000458938 192 ntBASIC3.68□□□□□ -1.82
KRT4P19013 RPL39P38-201ENST00000467018 153 ntBASIC3.68□□□□□ -1.82
KRT4P19013 AC022447.4-201ENST00000504053 364 ntBASIC3.68□□□□□ -1.82
KRT4P19013 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC3.68□□□□□ -1.82
KRT4P19013 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC3.68□□□□□ -1.82
KRT4P19013 AC025423.5-201ENST00000550230 219 ntBASIC3.68□□□□□ -1.82
KRT4P19013 AC068790.4-201ENST00000602474 263 ntBASIC3.68□□□□□ -1.82
KRT4P19013 AL158032.1-201ENST00000605401 106 ntBASIC3.68□□□□□ -1.82
KRT4P19013 GOLT1B-210ENST00000631252 223 ntTSL 3 BASIC3.68□□□□□ -1.82
KRT4P19013 MIR4272-201ENST00000635924 64 ntBASIC3.68□□□□□ -1.82
KRT4P19013 SNCA-213ENST00000618500 3022 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
KRT4P19013 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
KRT4P19013 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.68□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 87.5 ms