Protein–RNA interactions for Protein: P16234

PDGFRA, Platelet-derived growth factor receptor alpha, humanhuman

Predictions only

Length 1,089 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRAP16234 AC079349.1-201ENST00000509096 589 ntTSL 2 BASIC2.7□□□□□ -1.98
PDGFRAP16234 MTCYBP20-201ENST00000524239 1129 ntBASIC2.7□□□□□ -1.98
PDGFRAP16234 AP001646.1-201ENST00000527936 915 ntBASIC2.7□□□□□ -1.98
PDGFRAP16234 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC2.7□□□□□ -1.98
PDGFRAP16234 AC072046.2-201ENST00000618366 268 ntBASIC2.7□□□□□ -1.98
PDGFRAP16234 AC093648.1-201ENST00000623546 606 ntBASIC2.7□□□□□ -1.98
PDGFRAP16234 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
PDGFRAP16234 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC2.7□□□□□ -1.98
PDGFRAP16234 AC093536.2-201ENST00000565257 1406 ntBASIC2.69□□□□□ -1.98
PDGFRAP16234 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC2.69□□□□□ -1.98
PDGFRAP16234 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
PDGFRAP16234 SNORA75B-201ENST00000384053 137 ntBASIC2.69□□□□□ -1.98
PDGFRAP16234 CISD1P1-201ENST00000393907 327 ntBASIC2.69□□□□□ -1.98
PDGFRAP16234 AL139039.1-201ENST00000401900 692 ntBASIC2.69□□□□□ -1.98
PDGFRAP16234 MIR1302-8-201ENST00000408342 128 ntBASIC2.69□□□□□ -1.98
PDGFRAP16234 AL031779.1-201ENST00000415663 330 ntBASIC2.69□□□□□ -1.98
PDGFRAP16234 AC007463.1-201ENST00000416534 734 ntTSL 3 BASIC2.69□□□□□ -1.98
PDGFRAP16234 ACTR3BP6-201ENST00000422332 1241 ntBASIC2.69□□□□□ -1.98
PDGFRAP16234 MTCYBP5-201ENST00000423752 1135 ntBASIC2.69□□□□□ -1.98
PDGFRAP16234 PTGES3P4-201ENST00000426243 356 ntBASIC2.69□□□□□ -1.98
PDGFRAP16234 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC2.69□□□□□ -1.98
PDGFRAP16234 MICF-203ENST00000432679 129 ntBASIC2.69□□□□□ -1.98
PDGFRAP16234 NFIA-AS1-201ENST00000442027 384 ntTSL 2 BASIC2.69□□□□□ -1.98
PDGFRAP16234 AC092001.1-201ENST00000453012 261 ntBASIC2.69□□□□□ -1.98
PDGFRAP16234 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC2.69□□□□□ -1.98
PDGFRAP16234 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC2.69□□□□□ -1.98
PDGFRAP16234 RNU6-956P-201ENST00000458868 103 ntBASIC2.69□□□□□ -1.98
PDGFRAP16234 SRI-210ENST00000490437 570 ntTSL 2 BASIC2.69□□□□□ -1.98
PDGFRAP16234 AC022493.1-201ENST00000492984 337 ntBASIC2.69□□□□□ -1.98
PDGFRAP16234 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC2.69□□□□□ -1.98
PDGFRAP16234 RBBP4P6-201ENST00000508098 202 ntBASIC2.69□□□□□ -1.98
PDGFRAP16234 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC2.69□□□□□ -1.98
PDGFRAP16234 RNU6-581P-201ENST00000516214 105 ntBASIC2.69□□□□□ -1.98
PDGFRAP16234 SNORA31.6-201ENST00000516241 130 ntBASIC2.69□□□□□ -1.98
PDGFRAP16234 RNU6-685P-201ENST00000517088 95 ntBASIC2.69□□□□□ -1.98
PDGFRAP16234 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC2.69□□□□□ -1.98
PDGFRAP16234 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC2.69□□□□□ -1.98
PDGFRAP16234 AP000873.5-201ENST00000533906 236 ntBASIC2.69□□□□□ -1.98
PDGFRAP16234 AC243972.3-201ENST00000539655 198 ntBASIC2.69□□□□□ -1.98
PDGFRAP16234 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC2.69□□□□□ -1.98
PDGFRAP16234 AC234778.2-201ENST00000566241 354 ntBASIC2.69□□□□□ -1.98
PDGFRAP16234 MIR3616-201ENST00000584070 92 ntBASIC2.69□□□□□ -1.98
PDGFRAP16234 AC010620.1-201ENST00000601088 1102 ntBASIC2.69□□□□□ -1.98
PDGFRAP16234 uc_338.14-201ENST00000613162 166 ntBASIC2.69□□□□□ -1.98
PDGFRAP16234 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.69□□□□□ -1.98
PDGFRAP16234 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC2.69□□□□□ -1.98
PDGFRAP16234 IL33-202ENST00000417746 2327 ntTSL 2 BASIC2.69□□□□□ -1.98
PDGFRAP16234 ANKRD36BP1-202ENST00000604892 1417 ntBASIC2.68□□□□□ -1.98
PDGFRAP16234 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC2.68□□□□□ -1.98
PDGFRAP16234 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
PDGFRAP16234 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC2.68□□□□□ -1.98
PDGFRAP16234 RNU6-898P-201ENST00000365627 104 ntBASIC2.68□□□□□ -1.98
PDGFRAP16234 RNU1-138P-201ENST00000384093 164 ntBASIC2.68□□□□□ -1.98
PDGFRAP16234 RNU6-74P-201ENST00000384235 107 ntBASIC2.68□□□□□ -1.98
PDGFRAP16234 AC104777.3-201ENST00000416350 545 ntTSL 3 BASIC2.68□□□□□ -1.98
PDGFRAP16234 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC2.68□□□□□ -1.98
PDGFRAP16234 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC2.68□□□□□ -1.98
PDGFRAP16234 INTS6L-AS1-201ENST00000430820 398 ntTSL 3 BASIC2.68□□□□□ -1.98
PDGFRAP16234 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC2.68□□□□□ -1.98
PDGFRAP16234 LINC01828-202ENST00000450294 955 ntTSL 5 BASIC2.68□□□□□ -1.98
PDGFRAP16234 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC2.68□□□□□ -1.98
PDGFRAP16234 BTF3P15-201ENST00000455606 336 ntBASIC2.68□□□□□ -1.98
PDGFRAP16234 RPL31P3-201ENST00000458430 332 ntBASIC2.68□□□□□ -1.98
PDGFRAP16234 SRIP1-201ENST00000489235 288 ntBASIC2.68□□□□□ -1.98
PDGFRAP16234 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC2.68□□□□□ -1.98
PDGFRAP16234 AC023194.1-201ENST00000493084 308 ntBASIC2.68□□□□□ -1.98
PDGFRAP16234 FAM92A1P2-202ENST00000504766 877 ntBASIC2.68□□□□□ -1.98
PDGFRAP16234 AC116655.1-201ENST00000508324 901 ntBASIC2.68□□□□□ -1.98
PDGFRAP16234 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.68□□□□□ -1.98
PDGFRAP16234 RNU4-29P-201ENST00000515943 174 ntBASIC2.68□□□□□ -1.98
PDGFRAP16234 RNU1-104P-201ENST00000517280 175 ntBASIC2.68□□□□□ -1.98
PDGFRAP16234 AC109329.2-201ENST00000519658 482 ntBASIC2.68□□□□□ -1.98
PDGFRAP16234 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC2.68□□□□□ -1.98
PDGFRAP16234 CKS1BP7-201ENST00000522230 235 ntBASIC2.68□□□□□ -1.98
PDGFRAP16234 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC2.68□□□□□ -1.98
PDGFRAP16234 AP003730.2-202ENST00000527281 774 ntTSL 3 BASIC2.68□□□□□ -1.98
PDGFRAP16234 AL136146.2-201ENST00000534594 494 ntTSL 2 BASIC2.68□□□□□ -1.98
PDGFRAP16234 OR5V1-216ENST00000543825 1048 ntAPPRIS P1 BASIC2.68□□□□□ -1.98
PDGFRAP16234 AC090049.1-201ENST00000551075 1011 ntTSL 3 BASIC2.68□□□□□ -1.98
PDGFRAP16234 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC2.68□□□□□ -1.98
PDGFRAP16234 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC2.68□□□□□ -1.98
PDGFRAP16234 MIR3913-1-201ENST00000577744 102 ntBASIC2.68□□□□□ -1.98
PDGFRAP16234 MIR4528-201ENST00000577763 90 ntBASIC2.68□□□□□ -1.98
PDGFRAP16234 AP001486.3-201ENST00000615334 372 ntBASIC2.68□□□□□ -1.98
PDGFRAP16234 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.68□□□□□ -1.98
PDGFRAP16234 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC2.68□□□□□ -1.98
PDGFRAP16234 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
PDGFRAP16234 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC2.68□□□□□ -1.98
PDGFRAP16234 MIR412-201ENST00000362142 91 ntBASIC2.67□□□□□ -1.98
PDGFRAP16234 RNU6-1280P-201ENST00000365211 107 ntBASIC2.67□□□□□ -1.98
PDGFRAP16234 Y_RNA.367-201ENST00000365544 101 ntBASIC2.67□□□□□ -1.98
PDGFRAP16234 SNORD116-9-201ENST00000384000 95 ntBASIC2.67□□□□□ -1.98
PDGFRAP16234 SNORA75-201ENST00000384158 137 ntBASIC2.67□□□□□ -1.98
PDGFRAP16234 SNORD116-3-201ENST00000384287 95 ntBASIC2.67□□□□□ -1.98
PDGFRAP16234 RNU6-348P-201ENST00000384386 107 ntBASIC2.67□□□□□ -1.98
PDGFRAP16234 SNORD116-7-201ENST00000384404 95 ntBASIC2.67□□□□□ -1.98
PDGFRAP16234 SNORD116-5-201ENST00000384462 95 ntBASIC2.67□□□□□ -1.98
PDGFRAP16234 AC000123.1-201ENST00000418215 516 ntTSL 5 BASIC2.67□□□□□ -1.98
PDGFRAP16234 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC2.67□□□□□ -1.98
PDGFRAP16234 CALM2P2-201ENST00000428512 440 ntBASIC2.67□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 138 ms