Protein–RNA interactions for Protein: P09661

SNRPA1, U2 small nuclear ribonucleoprotein A', humanhuman

Known RBP Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1P09661 Y_RNA.579-201ENST00000390939 94 ntBASIC3.93□□□□□ -1.78
SNRPA1P09661 MIR548K-201ENST00000408406 116 ntBASIC3.93□□□□□ -1.78
SNRPA1P09661 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC3.93□□□□□ -1.78
SNRPA1P09661 VN1R36P-201ENST00000414936 291 ntBASIC3.93□□□□□ -1.78
SNRPA1P09661 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC3.93□□□□□ -1.78
SNRPA1P09661 AL353729.1-201ENST00000425044 720 ntBASIC3.93□□□□□ -1.78
SNRPA1P09661 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC3.93□□□□□ -1.78
SNRPA1P09661 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC3.93□□□□□ -1.78
SNRPA1P09661 Y_RNA.635-201ENST00000459041 101 ntBASIC3.93□□□□□ -1.78
SNRPA1P09661 TRBV1-201ENST00000476502 284 ntBASIC3.93□□□□□ -1.78
SNRPA1P09661 AC012181.1-201ENST00000479895 423 ntBASIC3.93□□□□□ -1.78
SNRPA1P09661 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC3.93□□□□□ -1.78
SNRPA1P09661 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC3.93□□□□□ -1.78
SNRPA1P09661 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC3.93□□□□□ -1.78
SNRPA1P09661 RNU6-566P-201ENST00000516790 107 ntBASIC3.93□□□□□ -1.78
SNRPA1P09661 RN7SKP272-201ENST00000516988 232 ntBASIC3.93□□□□□ -1.78
SNRPA1P09661 SNORA31.20-201ENST00000517111 133 ntBASIC3.93□□□□□ -1.78
SNRPA1P09661 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC3.93□□□□□ -1.78
SNRPA1P09661 IGKV2D-23-201ENST00000518179 286 ntBASIC3.93□□□□□ -1.78
SNRPA1P09661 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC3.93□□□□□ -1.78
SNRPA1P09661 AP004371.1-201ENST00000525240 214 ntBASIC3.93□□□□□ -1.78
SNRPA1P09661 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC3.93□□□□□ -1.78
SNRPA1P09661 AC093249.1-201ENST00000567049 203 ntBASIC3.93□□□□□ -1.78
SNRPA1P09661 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC3.93□□□□□ -1.78
SNRPA1P09661 AP001330.4-201ENST00000604350 154 ntBASIC3.93□□□□□ -1.78
SNRPA1P09661 AL627309.6-201ENST00000606857 840 ntBASIC3.93□□□□□ -1.78
SNRPA1P09661 AL133215.3-201ENST00000609801 448 ntBASIC3.93□□□□□ -1.78
SNRPA1P09661 AL359547.2-201ENST00000615810 418 ntBASIC3.93□□□□□ -1.78
SNRPA1P09661 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC3.93□□□□□ -1.78
SNRPA1P09661 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC3.93□□□□□ -1.78
SNRPA1P09661 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC3.93□□□□□ -1.78
SNRPA1P09661 HSPA8P4-201ENST00000511877 1920 ntBASIC3.93□□□□□ -1.78
SNRPA1P09661 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
SNRPA1P09661 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
SNRPA1P09661 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
SNRPA1P09661 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC3.92□□□□□ -1.78
SNRPA1P09661 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC3.92□□□□□ -1.78
SNRPA1P09661 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC3.92□□□□□ -1.78
SNRPA1P09661 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
SNRPA1P09661 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC3.92□□□□□ -1.78
SNRPA1P09661 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
SNRPA1P09661 SNORA36C-201ENST00000384289 132 ntBASIC3.92□□□□□ -1.78
SNRPA1P09661 RNU6-393P-201ENST00000384475 107 ntBASIC3.92□□□□□ -1.78
SNRPA1P09661 SNORD116-29-201ENST00000384516 83 ntBASIC3.92□□□□□ -1.78
SNRPA1P09661 TOMM22P1-201ENST00000418578 312 ntBASIC3.92□□□□□ -1.78
SNRPA1P09661 MTCO1P39-201ENST00000426148 480 ntBASIC3.92□□□□□ -1.78
SNRPA1P09661 AL139132.1-201ENST00000431587 344 ntBASIC3.92□□□□□ -1.78
SNRPA1P09661 AL591212.2-201ENST00000433923 257 ntBASIC3.92□□□□□ -1.78
SNRPA1P09661 SETP5-201ENST00000437270 562 ntBASIC3.92□□□□□ -1.78
SNRPA1P09661 AC107399.1-201ENST00000451226 265 ntBASIC3.92□□□□□ -1.78
SNRPA1P09661 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC3.92□□□□□ -1.78
SNRPA1P09661 RPL21P104-201ENST00000464143 478 ntBASIC3.92□□□□□ -1.78
SNRPA1P09661 VN1R104P-201ENST00000505115 1009 ntBASIC3.92□□□□□ -1.78
SNRPA1P09661 LIAS-206ENST00000513731 826 ntTSL 5 BASIC3.92□□□□□ -1.78
SNRPA1P09661 SCARNA20.6-201ENST00000517251 106 ntBASIC3.92□□□□□ -1.78
SNRPA1P09661 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC3.92□□□□□ -1.78
SNRPA1P09661 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC3.92□□□□□ -1.78
SNRPA1P09661 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC3.92□□□□□ -1.78
SNRPA1P09661 MIR4790-201ENST00000577799 79 ntBASIC3.92□□□□□ -1.78
SNRPA1P09661 SNORD84-203ENST00000584275 78 ntBASIC3.92□□□□□ -1.78
SNRPA1P09661 AC174048.1-201ENST00000603389 144 ntBASIC3.92□□□□□ -1.78
SNRPA1P09661 PART1_1.1-201ENST00000611761 217 ntBASIC3.92□□□□□ -1.78
SNRPA1P09661 AC084781.2-201ENST00000615568 161 ntBASIC3.92□□□□□ -1.78
SNRPA1P09661 MTND5P42-201ENST00000637720 498 ntBASIC3.92□□□□□ -1.78
SNRPA1P09661 DLD-214ENST00000639772 421 ntTSL 5 BASIC3.92□□□□□ -1.78
SNRPA1P09661 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
SNRPA1P09661 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC3.92□□□□□ -1.78
SNRPA1P09661 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC3.92□□□□□ -1.78
SNRPA1P09661 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.91□□□□□ -1.78
SNRPA1P09661 RNU6-600P-201ENST00000362524 99 ntBASIC3.91□□□□□ -1.78
SNRPA1P09661 Y_RNA.162-201ENST00000363683 102 ntBASIC3.91□□□□□ -1.78
SNRPA1P09661 RNU6-43P-201ENST00000384302 107 ntBASIC3.91□□□□□ -1.78
SNRPA1P09661 EEF1A1P41-201ENST00000414667 207 ntBASIC3.91□□□□□ -1.78
SNRPA1P09661 MTCO2P27-201ENST00000420740 428 ntBASIC3.91□□□□□ -1.78
SNRPA1P09661 AL669831.1-202ENST00000428504 417 ntBASIC3.91□□□□□ -1.78
SNRPA1P09661 GTF2IP13-201ENST00000438487 386 ntBASIC3.91□□□□□ -1.78
SNRPA1P09661 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC3.91□□□□□ -1.78
SNRPA1P09661 BRK1P2-201ENST00000442875 223 ntBASIC3.91□□□□□ -1.78
SNRPA1P09661 HMGN1P18-201ENST00000457642 277 ntBASIC3.91□□□□□ -1.78
SNRPA1P09661 AC010401.1-201ENST00000463867 348 ntBASIC3.91□□□□□ -1.78
SNRPA1P09661 AC117440.1-201ENST00000474107 571 ntBASIC3.91□□□□□ -1.78
SNRPA1P09661 RPS29P26-201ENST00000477483 171 ntBASIC3.91□□□□□ -1.78
SNRPA1P09661 RPS4XP22-201ENST00000480755 780 ntBASIC3.91□□□□□ -1.78
SNRPA1P09661 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC3.91□□□□□ -1.78
SNRPA1P09661 MEPE-206ENST00000511670 550 ntTSL 4 BASIC3.91□□□□□ -1.78
SNRPA1P09661 RNU2-69P-201ENST00000516061 100 ntBASIC3.91□□□□□ -1.78
SNRPA1P09661 Y_RNA.718-201ENST00000517110 102 ntBASIC3.91□□□□□ -1.78
SNRPA1P09661 NDUFB9P3-201ENST00000521269 501 ntBASIC3.91□□□□□ -1.78
SNRPA1P09661 COPS8P3-201ENST00000526024 482 ntBASIC3.91□□□□□ -1.78
SNRPA1P09661 AP005639.2-201ENST00000527592 928 ntBASIC3.91□□□□□ -1.78
SNRPA1P09661 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC3.91□□□□□ -1.78
SNRPA1P09661 AC090115.3-201ENST00000553218 849 ntBASIC3.91□□□□□ -1.78
SNRPA1P09661 AC012182.1-201ENST00000570133 895 ntBASIC3.91□□□□□ -1.78
SNRPA1P09661 FAM60BP-201ENST00000578364 658 ntBASIC3.91□□□□□ -1.78
SNRPA1P09661 MIR4644-201ENST00000579929 84 ntBASIC3.91□□□□□ -1.78
SNRPA1P09661 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC3.91□□□□□ -1.78
SNRPA1P09661 AC022893.3-201ENST00000607665 437 ntBASIC3.91□□□□□ -1.78
SNRPA1P09661 U2.17-201ENST00000611454 95 ntBASIC3.91□□□□□ -1.78
SNRPA1P09661 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC3.91□□□□□ -1.78
SNRPA1P09661 AC090971.5-201ENST00000621102 293 ntBASIC3.91□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 124.2 ms