Protein–RNA interactions for Protein: P03886

MT-ND1, NADH-ubiquinone oxidoreductase chain 1, humanhuman

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND1P03886 RNU5F-8P-201ENST00000515941 111 ntBASIC2.48□□□□□ -2.01
MT-ND1P03886 SCARNA17.1-201ENST00000516211 143 ntBASIC2.48□□□□□ -2.01
MT-ND1P03886 SCARNA17.2-201ENST00000516334 143 ntBASIC2.48□□□□□ -2.01
MT-ND1P03886 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC2.48□□□□□ -2.01
MT-ND1P03886 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC2.48□□□□□ -2.01
MT-ND1P03886 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC2.48□□□□□ -2.01
MT-ND1P03886 AK6P1-201ENST00000540219 478 ntBASIC2.48□□□□□ -2.01
MT-ND1P03886 OR5V1-216ENST00000543825 1048 ntAPPRIS P1 BASIC2.48□□□□□ -2.01
MT-ND1P03886 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC2.48□□□□□ -2.01
MT-ND1P03886 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC2.48□□□□□ -2.01
MT-ND1P03886 AC008521.1-201ENST00000587471 187 ntBASIC2.48□□□□□ -2.01
MT-ND1P03886 AC016229.1-201ENST00000589242 487 ntTSL 5 BASIC2.48□□□□□ -2.01
MT-ND1P03886 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC2.48□□□□□ -2.01
MT-ND1P03886 AC012468.1-201ENST00000604888 430 ntBASIC2.48□□□□□ -2.01
MT-ND1P03886 MIR92B-201ENST00000607575 96 ntBASIC2.48□□□□□ -2.01
MT-ND1P03886 AC022893.3-201ENST00000607665 437 ntBASIC2.48□□□□□ -2.01
MT-ND1P03886 AP001596.2-201ENST00000608410 312 ntBASIC2.48□□□□□ -2.01
MT-ND1P03886 SCARNA17.4-201ENST00000614296 143 ntBASIC2.48□□□□□ -2.01
MT-ND1P03886 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC2.48□□□□□ -2.01
MT-ND1P03886 AC011155.2-201ENST00000623202 216 ntBASIC2.48□□□□□ -2.01
MT-ND1P03886 AC025034.2-201ENST00000623264 286 ntBASIC2.48□□□□□ -2.01
MT-ND1P03886 AC010297.1-201ENST00000623948 149 ntBASIC2.48□□□□□ -2.01
MT-ND1P03886 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC2.48□□□□□ -2.01
MT-ND1P03886 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
MT-ND1P03886 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC2.48□□□□□ -2.01
MT-ND1P03886 MTND4P5-201ENST00000435821 1374 ntBASIC2.48□□□□□ -2.01
MT-ND1P03886 ELF2P3-201ENST00000445099 1506 ntBASIC2.47□□□□□ -2.01
MT-ND1P03886 MAPK10-266ENST00000641066 6555 ntBASIC2.47□□□□□ -2.01
MT-ND1P03886 RNU6-1120P-201ENST00000362988 108 ntBASIC2.47□□□□□ -2.01
MT-ND1P03886 SNORD115-7-201ENST00000365306 82 ntBASIC2.47□□□□□ -2.01
MT-ND1P03886 SNORA4.3-201ENST00000365564 137 ntBASIC2.47□□□□□ -2.01
MT-ND1P03886 RNU1-73P-201ENST00000383971 164 ntBASIC2.47□□□□□ -2.01
MT-ND1P03886 SNORA18.3-201ENST00000384122 132 ntBASIC2.47□□□□□ -2.01
MT-ND1P03886 Y_RNA.534-201ENST00000384599 112 ntBASIC2.47□□□□□ -2.01
MT-ND1P03886 Y_RNA.576-201ENST00000384781 102 ntBASIC2.47□□□□□ -2.01
MT-ND1P03886 MIR454-201ENST00000390180 115 ntBASIC2.47□□□□□ -2.01
MT-ND1P03886 RNU6-817P-201ENST00000391083 104 ntBASIC2.47□□□□□ -2.01
MT-ND1P03886 RPL17P50-201ENST00000396131 546 ntBASIC2.47□□□□□ -2.01
MT-ND1P03886 UBA52P6-201ENST00000399822 382 ntBASIC2.47□□□□□ -2.01
MT-ND1P03886 AL591416.1-201ENST00000404015 867 ntBASIC2.47□□□□□ -2.01
MT-ND1P03886 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
MT-ND1P03886 RNU2-68P-201ENST00000410878 191 ntBASIC2.47□□□□□ -2.01
MT-ND1P03886 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC2.47□□□□□ -2.01
MT-ND1P03886 AL109913.1-201ENST00000421173 514 ntBASIC2.47□□□□□ -2.01
MT-ND1P03886 ISCA1P1-201ENST00000426679 387 ntBASIC2.47□□□□□ -2.01
MT-ND1P03886 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC2.47□□□□□ -2.01
MT-ND1P03886 AL592045.1-201ENST00000429867 352 ntBASIC2.47□□□□□ -2.01
MT-ND1P03886 MTND1P34-201ENST00000438556 671 ntBASIC2.47□□□□□ -2.01
MT-ND1P03886 MTND4P25-201ENST00000441039 533 ntBASIC2.47□□□□□ -2.01
MT-ND1P03886 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
MT-ND1P03886 PSPHP1-201ENST00000450062 261 ntBASIC2.47□□□□□ -2.01
MT-ND1P03886 FABP5P15-201ENST00000453566 214 ntBASIC2.47□□□□□ -2.01
MT-ND1P03886 AL162395.1-201ENST00000457882 422 ntBASIC2.47□□□□□ -2.01
MT-ND1P03886 snoU13.22-201ENST00000459428 104 ntBASIC2.47□□□□□ -2.01
MT-ND1P03886 AC006512.1-201ENST00000468816 291 ntBASIC2.47□□□□□ -2.01
MT-ND1P03886 SRIP1-201ENST00000489235 288 ntBASIC2.47□□□□□ -2.01
MT-ND1P03886 RPL39P36-201ENST00000490784 156 ntBASIC2.47□□□□□ -2.01
MT-ND1P03886 EIF4EP3-201ENST00000498782 656 ntBASIC2.47□□□□□ -2.01
MT-ND1P03886 AC092436.1-201ENST00000506450 503 ntBASIC2.47□□□□□ -2.01
MT-ND1P03886 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC2.47□□□□□ -2.01
MT-ND1P03886 RNU6-314P-201ENST00000516574 104 ntBASIC2.47□□□□□ -2.01
MT-ND1P03886 RNA5SP165-201ENST00000517142 115 ntBASIC2.47□□□□□ -2.01
MT-ND1P03886 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC2.47□□□□□ -2.01
MT-ND1P03886 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC2.47□□□□□ -2.01
MT-ND1P03886 C14orf105-204ENST00000526336 598 ntTSL 4 BASIC2.47□□□□□ -2.01
MT-ND1P03886 AP001893.2-201ENST00000526949 202 ntBASIC2.47□□□□□ -2.01
MT-ND1P03886 OR5AL2P-201ENST00000532185 920 ntBASIC2.47□□□□□ -2.01
MT-ND1P03886 AC022080.3-201ENST00000544433 482 ntBASIC2.47□□□□□ -2.01
MT-ND1P03886 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC2.47□□□□□ -2.01
MT-ND1P03886 CYCSP39-201ENST00000565821 309 ntBASIC2.47□□□□□ -2.01
MT-ND1P03886 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC2.47□□□□□ -2.01
MT-ND1P03886 MIR5195-201ENST00000583555 115 ntBASIC2.47□□□□□ -2.01
MT-ND1P03886 AC008752.3-201ENST00000588113 712 ntBASIC2.47□□□□□ -2.01
MT-ND1P03886 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC2.47□□□□□ -2.01
MT-ND1P03886 AC139792.3-201ENST00000623525 224 ntBASIC2.47□□□□□ -2.01
MT-ND1P03886 U2.21-201ENST00000637295 81 ntBASIC2.47□□□□□ -2.01
MT-ND1P03886 AC068137.3-201ENST00000639191 341 ntBASIC2.47□□□□□ -2.01
MT-ND1P03886 AC073869.6-201ENST00000640656 341 ntBASIC2.47□□□□□ -2.01
MT-ND1P03886 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.47□□□□□ -2.01
MT-ND1P03886 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.47□□□□□ -2.01
MT-ND1P03886 AC010329.5-201ENST00000623497 2174 ntBASIC2.47□□□□□ -2.01
MT-ND1P03886 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.47□□□□□ -2.01
MT-ND1P03886 AC080100.1-201ENST00000624239 5356 ntBASIC2.46□□□□□ -2.02
MT-ND1P03886 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
MT-ND1P03886 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC2.46□□□□□ -2.02
MT-ND1P03886 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC2.46□□□□□ -2.02
MT-ND1P03886 VTRNA1-1-201ENST00000363120 99 ntBASIC2.46□□□□□ -2.02
MT-ND1P03886 RNU6-179P-201ENST00000363350 107 ntBASIC2.46□□□□□ -2.02
MT-ND1P03886 RNU4-48P-201ENST00000365559 182 ntBASIC2.46□□□□□ -2.02
MT-ND1P03886 MIR548F1-201ENST00000408667 84 ntBASIC2.46□□□□□ -2.02
MT-ND1P03886 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC2.46□□□□□ -2.02
MT-ND1P03886 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC2.46□□□□□ -2.02
MT-ND1P03886 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC2.46□□□□□ -2.02
MT-ND1P03886 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
MT-ND1P03886 CALM2P2-201ENST00000428512 440 ntBASIC2.46□□□□□ -2.02
MT-ND1P03886 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC2.46□□□□□ -2.02
MT-ND1P03886 HMGB1P27-201ENST00000431429 603 ntBASIC2.46□□□□□ -2.02
MT-ND1P03886 GPM6BP2-201ENST00000432046 144 ntBASIC2.46□□□□□ -2.02
MT-ND1P03886 AL606489.2-201ENST00000433886 234 ntBASIC2.46□□□□□ -2.02
MT-ND1P03886 AL591212.2-201ENST00000433923 257 ntBASIC2.46□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 84.8 ms