Protein–RNA interactions for Protein: P02549

SPTA1, Spectrin alpha chain, erythrocytic 1, humanhuman

Predictions only

Length 2,419 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1P02549 SNORA8-201ENST00000384574 139 ntBASIC0.41□□□□□ -2.34
SPTA1P02549 MIR32-201ENST00000384965 70 ntBASIC0.41□□□□□ -2.34
SPTA1P02549 RNU6ATAC11P-201ENST00000408541 125 ntBASIC0.41□□□□□ -2.34
SPTA1P02549 RNU2-63P-201ENST00000410792 194 ntBASIC0.41□□□□□ -2.34
SPTA1P02549 RPL23AP6-201ENST00000446637 472 ntBASIC0.41□□□□□ -2.34
SPTA1P02549 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC0.41□□□□□ -2.34
SPTA1P02549 RPL39P28-201ENST00000465655 155 ntBASIC0.41□□□□□ -2.34
SPTA1P02549 SNORA44.1-201ENST00000517031 108 ntBASIC0.41□□□□□ -2.34
SPTA1P02549 CR383656.7-201ENST00000548164 174 ntBASIC0.41□□□□□ -2.34
SPTA1P02549 AC087481.2-201ENST00000565492 330 ntBASIC0.41□□□□□ -2.34
SPTA1P02549 AC243960.4-201ENST00000600532 288 ntBASIC0.41□□□□□ -2.34
SPTA1P02549 AC008121.1-201ENST00000603244 268 ntBASIC0.41□□□□□ -2.34
SPTA1P02549 FRG1HP-204ENST00000617940 757 ntBASIC0.41□□□□□ -2.34
SPTA1P02549 RNU1-58P-201ENST00000362413 163 ntBASIC0.4□□□□□ -2.34
SPTA1P02549 RNU4-23P-201ENST00000362839 140 ntBASIC0.4□□□□□ -2.34
SPTA1P02549 RNU6-730P-201ENST00000383954 104 ntBASIC0.4□□□□□ -2.34
SPTA1P02549 Y_RNA.572-201ENST00000384757 98 ntBASIC0.4□□□□□ -2.34
SPTA1P02549 AGR3-202ENST00000402239 563 ntTSL 2 BASIC0.4□□□□□ -2.34
SPTA1P02549 AC064852.1-201ENST00000427571 851 ntTSL 3 BASIC0.4□□□□□ -2.34
SPTA1P02549 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC0.4□□□□□ -2.34
SPTA1P02549 TPTE2P6-202ENST00000445572 1007 ntBASIC0.4□□□□□ -2.34
SPTA1P02549 AC010789.1-201ENST00000458489 291 ntTSL 5 BASIC0.4□□□□□ -2.34
SPTA1P02549 AC138853.1-201ENST00000503549 823 ntBASIC0.4□□□□□ -2.34
SPTA1P02549 AC005741.1-201ENST00000511094 432 ntBASIC0.4□□□□□ -2.34
SPTA1P02549 LY96-202ENST00000518893 430 ntTSL 3 BASIC0.4□□□□□ -2.34
SPTA1P02549 RERG-IT1-201ENST00000539734 301 ntTSL 3 BASIC0.4□□□□□ -2.34
SPTA1P02549 LINC02329-201ENST00000554753 511 ntTSL 5 BASIC0.4□□□□□ -2.34
SPTA1P02549 MIR4299-201ENST00000577899 72 ntBASIC0.4□□□□□ -2.34
SPTA1P02549 AL138963.2-201ENST00000605137 226 ntBASIC0.4□□□□□ -2.34
SPTA1P02549 AL078604.3-201ENST00000615580 211 ntBASIC0.4□□□□□ -2.34
SPTA1P02549 AC097372.4-201ENST00000625025 466 ntBASIC0.4□□□□□ -2.34
SPTA1P02549 RNU6-939P-201ENST00000384634 107 ntBASIC0.4□□□□□ -2.35
SPTA1P02549 AL356131.1-201ENST00000405826 414 ntBASIC0.4□□□□□ -2.35
SPTA1P02549 AC092047.1-201ENST00000424997 240 ntBASIC0.4□□□□□ -2.35
SPTA1P02549 AL365496.1-201ENST00000426885 215 ntBASIC0.4□□□□□ -2.35
SPTA1P02549 AL714022.1-201ENST00000439897 151 ntBASIC0.4□□□□□ -2.35
SPTA1P02549 AC116337.2-201ENST00000477662 156 ntBASIC0.4□□□□□ -2.35
SPTA1P02549 AC008494.2-201ENST00000514544 370 ntBASIC0.4□□□□□ -2.35
SPTA1P02549 SMURF2P1-201ENST00000514992 481 ntBASIC0.4□□□□□ -2.35
SPTA1P02549 SNORA4.4-201ENST00000515921 135 ntBASIC0.4□□□□□ -2.35
SPTA1P02549 RNU4-57P-201ENST00000515980 135 ntBASIC0.4□□□□□ -2.35
SPTA1P02549 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC0.4□□□□□ -2.35
SPTA1P02549 AC012435.1-202ENST00000568772 240 ntBASIC0.4□□□□□ -2.35
SPTA1P02549 AC007151.1-201ENST00000572774 483 ntBASIC0.4□□□□□ -2.35
SPTA1P02549 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC0.4□□□□□ -2.35
SPTA1P02549 AC091132.5-202ENST00000587078 501 ntTSL 3 BASIC0.4□□□□□ -2.35
SPTA1P02549 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC0.4□□□□□ -2.35
SPTA1P02549 AC084824.5-201ENST00000612009 413 ntBASIC0.4□□□□□ -2.35
SPTA1P02549 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC0.4□□□□□ -2.35
SPTA1P02549 AC068057.2-201ENST00000624047 895 ntBASIC0.4□□□□□ -2.35
SPTA1P02549 AC083865.1-201ENST00000636634 831 ntBASIC0.4□□□□□ -2.35
SPTA1P02549 SNORA25.8-201ENST00000364831 128 ntBASIC0.39□□□□□ -2.35
SPTA1P02549 SNORD51-201ENST00000384320 80 ntBASIC0.39□□□□□ -2.35
SPTA1P02549 RNU6ATAC2P-201ENST00000387943 126 ntBASIC0.39□□□□□ -2.35
SPTA1P02549 RNU6-700P-201ENST00000391043 107 ntBASIC0.39□□□□□ -2.35
SPTA1P02549 PRRC2CP1-201ENST00000404428 159 ntBASIC0.39□□□□□ -2.35
SPTA1P02549 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC0.39□□□□□ -2.35
SPTA1P02549 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC0.39□□□□□ -2.35
SPTA1P02549 RNU6-1095P-201ENST00000516148 108 ntBASIC0.39□□□□□ -2.35
SPTA1P02549 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC0.39□□□□□ -2.35
SPTA1P02549 AC005668.1-201ENST00000571142 476 ntBASIC0.39□□□□□ -2.35
SPTA1P02549 ABBA01006766.1-201ENST00000584728 294 ntBASIC0.39□□□□□ -2.35
SPTA1P02549 AC090116.1-201ENST00000615679 446 ntBASIC0.39□□□□□ -2.35
SPTA1P02549 ZFAT-AS1_1.1-201ENST00000620907 79 ntBASIC0.39□□□□□ -2.35
SPTA1P02549 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC0.39□□□□□ -2.35
SPTA1P02549 AP003399.1-201ENST00000637534 361 ntBASIC0.39□□□□□ -2.35
SPTA1P02549 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC0.39□□□□□ -2.35
SPTA1P02549 MTND5P30-201ENST00000452896 1731 ntBASIC0.39□□□□□ -2.35
SPTA1P02549 AC078974.1-201ENST00000411597 223 ntBASIC0.39□□□□□ -2.35
SPTA1P02549 RPS24P7-201ENST00000416921 246 ntBASIC0.39□□□□□ -2.35
SPTA1P02549 RPL7P29-201ENST00000437151 728 ntBASIC0.39□□□□□ -2.35
SPTA1P02549 AC023512.1-201ENST00000444513 499 ntBASIC0.39□□□□□ -2.35
SPTA1P02549 AL160287.1-201ENST00000455612 432 ntTSL 3 BASIC0.39□□□□□ -2.35
SPTA1P02549 AC026719.1-201ENST00000506059 456 ntTSL 3 BASIC0.39□□□□□ -2.35
SPTA1P02549 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC0.39□□□□□ -2.35
SPTA1P02549 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC0.39□□□□□ -2.35
SPTA1P02549 XIAPP1-201ENST00000603162 600 ntBASIC0.39□□□□□ -2.35
SPTA1P02549 MTCO2P22-201ENST00000603246 681 ntBASIC0.39□□□□□ -2.35
SPTA1P02549 AL355877.2-201ENST00000603670 358 ntBASIC0.39□□□□□ -2.35
SPTA1P02549 AC025588.3-201ENST00000604182 274 ntBASIC0.39□□□□□ -2.35
SPTA1P02549 AL357075.2-201ENST00000614906 189 ntBASIC0.39□□□□□ -2.35
SPTA1P02549 AC099654.5-201ENST00000636479 350 ntBASIC0.39□□□□□ -2.35
SPTA1P02549 AC087821.2-201ENST00000637086 450 ntBASIC0.39□□□□□ -2.35
SPTA1P02549 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC0.39□□□□□ -2.35
SPTA1P02549 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC0.39□□□□□ -2.35
SPTA1P02549 RNU1-96P-201ENST00000364163 162 ntBASIC0.38□□□□□ -2.35
SPTA1P02549 RNU6-1187P-201ENST00000364771 110 ntBASIC0.38□□□□□ -2.35
SPTA1P02549 HMGB1P17-201ENST00000403495 628 ntBASIC0.38□□□□□ -2.35
SPTA1P02549 MRPL35P1-201ENST00000404272 572 ntBASIC0.38□□□□□ -2.35
SPTA1P02549 AL158823.1-201ENST00000418441 478 ntBASIC0.38□□□□□ -2.35
SPTA1P02549 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC0.38□□□□□ -2.35
SPTA1P02549 GTF2IP20-201ENST00000431663 360 ntBASIC0.38□□□□□ -2.35
SPTA1P02549 MTCYBP3-201ENST00000445588 1137 ntBASIC0.38□□□□□ -2.35
SPTA1P02549 NUCB2-202ENST00000458064 1279 ntTSL 1 (best) BASIC0.38□□□□□ -2.35
SPTA1P02549 SNORA14.1-201ENST00000516113 141 ntBASIC0.38□□□□□ -2.35
SPTA1P02549 SNORA31.6-201ENST00000516241 130 ntBASIC0.38□□□□□ -2.35
SPTA1P02549 HMSD-204ENST00000526932 162 ntTSL 3 BASIC0.38□□□□□ -2.35
SPTA1P02549 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC0.38□□□□□ -2.35
SPTA1P02549 AC090888.1-201ENST00000561335 1141 ntBASIC0.38□□□□□ -2.35
SPTA1P02549 MIR4504-201ENST00000577413 92 ntBASIC0.38□□□□□ -2.35
Retrieved 100 of 98,524 protein–RNA pairs in 111.9 ms