Protein–RNA interactions for Protein: O60858

TRIM13, E3 ubiquitin-protein ligase TRIM13, humanhuman

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13O60858 MIR6719-201ENST00000622428 87 ntBASIC4.01□□□□□ -1.77
TRIM13O60858 AL355480.1-201ENST00000629041 99 ntBASIC4.01□□□□□ -1.77
TRIM13O60858 AC243829.7-201ENST00000633081 225 ntBASIC4.01□□□□□ -1.77
TRIM13O60858 U6.106-201ENST00000636360 105 ntBASIC4.01□□□□□ -1.77
TRIM13O60858 MIR4275-201ENST00000636486 87 ntBASIC4.01□□□□□ -1.77
TRIM13O60858 ZSCAN26-204ENST00000614088 2321 ntTSL 3 BASIC4.01□□□□□ -1.77
TRIM13O60858 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC4.01□□□□□ -1.77
TRIM13O60858 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC4.01□□□□□ -1.77
TRIM13O60858 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC4.01□□□□□ -1.77
TRIM13O60858 MNS1-201ENST00000260453 2023 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
TRIM13O60858 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC4□□□□□ -1.77
TRIM13O60858 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC4□□□□□ -1.77
TRIM13O60858 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC4□□□□□ -1.77
TRIM13O60858 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC4□□□□□ -1.77
TRIM13O60858 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
TRIM13O60858 Y_RNA.8-201ENST00000362353 102 ntBASIC4□□□□□ -1.77
TRIM13O60858 RNA5SP322-201ENST00000363617 119 ntBASIC4□□□□□ -1.77
TRIM13O60858 SNORD35B-201ENST00000363660 87 ntBASIC4□□□□□ -1.77
TRIM13O60858 RNU6-1020P-201ENST00000363684 107 ntBASIC4□□□□□ -1.77
TRIM13O60858 RNU6-804P-201ENST00000384286 107 ntBASIC4□□□□□ -1.77
TRIM13O60858 RNU6-933P-201ENST00000384424 107 ntBASIC4□□□□□ -1.77
TRIM13O60858 MIR323B-201ENST00000385269 82 ntBASIC4□□□□□ -1.77
TRIM13O60858 RNA5SP239-201ENST00000410218 129 ntBASIC4□□□□□ -1.77
TRIM13O60858 AC017079.2-201ENST00000416102 485 ntBASIC4□□□□□ -1.77
TRIM13O60858 AC099677.1-201ENST00000420575 175 ntBASIC4□□□□□ -1.77
TRIM13O60858 RPS15AP6-201ENST00000420703 385 ntBASIC4□□□□□ -1.77
TRIM13O60858 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC4□□□□□ -1.77
TRIM13O60858 AL358472.1-201ENST00000431295 329 ntBASIC4□□□□□ -1.77
TRIM13O60858 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC4□□□□□ -1.77
TRIM13O60858 AC009487.1-201ENST00000444164 403 ntTSL 3 BASIC4□□□□□ -1.77
TRIM13O60858 AL645939.1-201ENST00000453429 797 ntBASIC4□□□□□ -1.77
TRIM13O60858 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC4□□□□□ -1.77
TRIM13O60858 RNA5SP246-201ENST00000458909 119 ntBASIC4□□□□□ -1.77
TRIM13O60858 AC018638.3-201ENST00000461273 132 ntBASIC4□□□□□ -1.77
TRIM13O60858 BTBD11-206ENST00000494235 811 ntTSL 2 BASIC4□□□□□ -1.77
TRIM13O60858 RPL7P47-201ENST00000497299 556 ntBASIC4□□□□□ -1.77
TRIM13O60858 Y_RNA.662-201ENST00000516028 97 ntBASIC4□□□□□ -1.77
TRIM13O60858 RNU6-352P-201ENST00000516908 107 ntBASIC4□□□□□ -1.77
TRIM13O60858 RN7SKP60-201ENST00000516985 239 ntBASIC4□□□□□ -1.77
TRIM13O60858 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC4□□□□□ -1.77
TRIM13O60858 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC4□□□□□ -1.77
TRIM13O60858 SYF2P1-201ENST00000550658 413 ntBASIC4□□□□□ -1.77
TRIM13O60858 MIR5696-201ENST00000578474 85 ntBASIC4□□□□□ -1.77
TRIM13O60858 MIR486-1-201ENST00000612171 68 ntBASIC4□□□□□ -1.77
TRIM13O60858 AL031601.2-202ENST00000622650 282 ntBASIC4□□□□□ -1.77
TRIM13O60858 AC006065.5-201ENST00000623427 349 ntBASIC4□□□□□ -1.77
TRIM13O60858 U6.92-201ENST00000636464 89 ntBASIC4□□□□□ -1.77
TRIM13O60858 AC109462.4-201ENST00000637882 581 ntTSL 5 BASIC4□□□□□ -1.77
TRIM13O60858 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC4□□□□□ -1.77
TRIM13O60858 WDR72-204ENST00000559418 3602 ntTSL 5 BASIC4□□□□□ -1.77
TRIM13O60858 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
TRIM13O60858 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC4□□□□□ -1.77
TRIM13O60858 DLG1-217ENST00000452595 3053 ntTSL 2 BASIC4□□□□□ -1.77
TRIM13O60858 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC4□□□□□ -1.77
TRIM13O60858 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC4□□□□□ -1.77
TRIM13O60858 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
TRIM13O60858 AC021355.1-202ENST00000519996 1633 ntTSL 2 BASIC3.99□□□□□ -1.77
TRIM13O60858 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC3.99□□□□□ -1.77
TRIM13O60858 CCDC91-201ENST00000381259 2334 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
TRIM13O60858 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
TRIM13O60858 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC3.99□□□□□ -1.77
TRIM13O60858 RNY4P28-201ENST00000365281 93 ntBASIC3.99□□□□□ -1.77
TRIM13O60858 RNU6ATAC15P-201ENST00000408279 121 ntBASIC3.99□□□□□ -1.77
TRIM13O60858 MIR1251-201ENST00000408552 70 ntBASIC3.99□□□□□ -1.77
TRIM13O60858 RNU2-43P-201ENST00000410306 190 ntBASIC3.99□□□□□ -1.77
TRIM13O60858 RN7SKP51-201ENST00000410781 304 ntBASIC3.99□□□□□ -1.77
TRIM13O60858 RPL21P90-201ENST00000415692 466 ntBASIC3.99□□□□□ -1.77
TRIM13O60858 RPS29P17-201ENST00000430795 166 ntBASIC3.99□□□□□ -1.77
TRIM13O60858 BX679664.1-201ENST00000434429 253 ntBASIC3.99□□□□□ -1.77
TRIM13O60858 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC3.99□□□□□ -1.77
TRIM13O60858 CYCSP43-201ENST00000438233 310 ntBASIC3.99□□□□□ -1.77
TRIM13O60858 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC3.99□□□□□ -1.77
TRIM13O60858 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC3.99□□□□□ -1.77
TRIM13O60858 AC022081.1-201ENST00000537327 433 ntTSL 2 BASIC3.99□□□□□ -1.77
TRIM13O60858 TMEM106C-220ENST00000552561 810 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
TRIM13O60858 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC3.99□□□□□ -1.77
TRIM13O60858 MIR3144-201ENST00000579460 79 ntBASIC3.99□□□□□ -1.77
TRIM13O60858 AC093227.3-202ENST00000586606 704 ntAPPRIS P5 TSL 3 BASIC3.99□□□□□ -1.77
TRIM13O60858 AL049539.1-201ENST00000611964 459 ntBASIC3.99□□□□□ -1.77
TRIM13O60858 RN7SL722P-201ENST00000617780 284 ntBASIC3.99□□□□□ -1.77
TRIM13O60858 RN7SL565P-201ENST00000618246 284 ntBASIC3.99□□□□□ -1.77
TRIM13O60858 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC3.99□□□□□ -1.77
TRIM13O60858 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC3.99□□□□□ -1.77
TRIM13O60858 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
TRIM13O60858 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC3.99□□□□□ -1.77
TRIM13O60858 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC3.98□□□□□ -1.77
TRIM13O60858 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
TRIM13O60858 Y_RNA.383-201ENST00000383855 97 ntBASIC3.98□□□□□ -1.77
TRIM13O60858 RNU6-14P-201ENST00000384630 106 ntBASIC3.98□□□□□ -1.77
TRIM13O60858 RPS16P5-201ENST00000406501 404 ntBASIC3.98□□□□□ -1.77
TRIM13O60858 RNU6-394P-201ENST00000410735 107 ntBASIC3.98□□□□□ -1.77
TRIM13O60858 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC3.98□□□□□ -1.77
TRIM13O60858 AC092573.2-201ENST00000434546 243 ntBASIC3.98□□□□□ -1.77
TRIM13O60858 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC3.98□□□□□ -1.77
TRIM13O60858 TMEM212-AS1-201ENST00000449106 427 ntTSL 3 BASIC3.98□□□□□ -1.77
TRIM13O60858 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC3.98□□□□□ -1.77
TRIM13O60858 RPL30P10-201ENST00000488148 337 ntBASIC3.98□□□□□ -1.77
TRIM13O60858 MTND3P25-201ENST00000509243 135 ntBASIC3.98□□□□□ -1.77
TRIM13O60858 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC3.98□□□□□ -1.77
TRIM13O60858 AC026726.1-201ENST00000512859 601 ntBASIC3.98□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 123.6 ms