Protein–RNA interactions for Protein: O43707

ACTN4, Alpha-actinin-4, humanhuman

Known RBP Predictions only

Length 911 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4O43707 DNAH8-201ENST00000327475 14360 ntAPPRIS P2 TSL 5 BASIC5.39□□□□□ -1.55
ACTN4O43707 FILIP1-203ENST00000393004 7807 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
ACTN4O43707 DICER1-212ENST00000541352 5621 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
ACTN4O43707 C15orf41-212ENST00000567389 2618 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
ACTN4O43707 MIR765-201ENST00000390226 114 ntBASIC5.39□□□□□ -1.55
ACTN4O43707 AC079780.1-201ENST00000428259 207 ntBASIC5.39□□□□□ -1.55
ACTN4O43707 AC243964.1-201ENST00000441814 261 ntBASIC5.39□□□□□ -1.55
ACTN4O43707 AC112715.1-201ENST00000445534 350 ntTSL 3 BASIC5.39□□□□□ -1.55
ACTN4O43707 AL589765.3-201ENST00000446084 462 ntBASIC5.39□□□□□ -1.55
ACTN4O43707 AL591623.2-201ENST00000449978 222 ntBASIC5.39□□□□□ -1.55
ACTN4O43707 AC006026.2-201ENST00000457376 180 ntBASIC5.39□□□□□ -1.55
ACTN4O43707 AC016256.1-201ENST00000547971 354 ntBASIC5.39□□□□□ -1.55
ACTN4O43707 MIR6826-201ENST00000617808 98 ntBASIC5.39□□□□□ -1.55
ACTN4O43707 CR381572.2-201ENST00000624852 397 ntBASIC5.39□□□□□ -1.55
ACTN4O43707 LINC00276-202ENST00000418420 3503 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
ACTN4O43707 OBSCN-214ENST00000636875 23907 ntTSL 5 BASIC5.39□□□□□ -1.55
ACTN4O43707 ARHGAP42P3-201ENST00000443989 2508 ntBASIC5.39□□□□□ -1.55
ACTN4O43707 LINGO2-201ENST00000308675 3031 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
ACTN4O43707 IQCG-201ENST00000265239 2262 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
ACTN4O43707 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
ACTN4O43707 C6orf10-210ENST00000617061 1904 ntAPPRIS ALT2 TSL 5 BASIC5.38□□□□□ -1.55
ACTN4O43707 ATP13A3-211ENST00000619199 5227 ntTSL 2 BASIC5.38□□□□□ -1.55
ACTN4O43707 MYBPC1-204ENST00000452455 3861 ntAPPRIS ALT2 TSL 2 BASIC5.38□□□□□ -1.55
ACTN4O43707 RASGEF1B-207ENST00000509081 3016 ntAPPRIS ALT1 TSL 5 BASIC5.38□□□□□ -1.55
ACTN4O43707 DCX-202ENST00000358070 9405 ntAPPRIS ALT1 TSL 1 (best) BASIC5.38□□□□□ -1.55
ACTN4O43707 USP26-203ENST00000511190 3665 ntAPPRIS P1 TSL 2 BASIC5.38□□□□□ -1.55
ACTN4O43707 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC5.38□□□□□ -1.55
ACTN4O43707 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
ACTN4O43707 DEFB108F-201ENST00000344638 222 ntBASIC5.38□□□□□ -1.55
ACTN4O43707 RNU6-755P-201ENST00000364400 103 ntBASIC5.38□□□□□ -1.55
ACTN4O43707 Y_RNA.309-201ENST00000365046 111 ntBASIC5.38□□□□□ -1.55
ACTN4O43707 U3.30-201ENST00000391308 210 ntBASIC5.38□□□□□ -1.55
ACTN4O43707 RNU6ATAC19P-201ENST00000408096 110 ntBASIC5.38□□□□□ -1.55
ACTN4O43707 RNU4-34P-201ENST00000410431 124 ntBASIC5.38□□□□□ -1.55
ACTN4O43707 AC098614.2-201ENST00000426040 255 ntBASIC5.38□□□□□ -1.55
ACTN4O43707 AL358075.3-201ENST00000426289 226 ntBASIC5.38□□□□□ -1.55
ACTN4O43707 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC5.38□□□□□ -1.55
ACTN4O43707 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC5.38□□□□□ -1.55
ACTN4O43707 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC5.38□□□□□ -1.55
ACTN4O43707 AC005699.1-205ENST00000510639 427 ntTSL 2 BASIC5.38□□□□□ -1.55
ACTN4O43707 RNU6-1256P-201ENST00000516539 103 ntBASIC5.38□□□□□ -1.55
ACTN4O43707 AC024153.1-201ENST00000603103 365 ntBASIC5.38□□□□□ -1.55
ACTN4O43707 AC004467.1-201ENST00000615678 330 ntBASIC5.38□□□□□ -1.55
ACTN4O43707 AC243585.1-201ENST00000617867 607 ntTSL 3 BASIC5.38□□□□□ -1.55
ACTN4O43707 MAPK10-235ENST00000638225 8941 ntAPPRIS P2 TSL 1 (best) BASIC5.38□□□□□ -1.55
ACTN4O43707 AC016687.3-202ENST00000505018 2404 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
ACTN4O43707 OR2T7-202ENST00000641557 3409 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
ACTN4O43707 AC126323.6-202ENST00000568092 3511 ntBASIC5.37□□□□□ -1.55
ACTN4O43707 MLIP-213ENST00000514921 5743 ntAPPRIS ALT2 TSL 1 (best) BASIC5.37□□□□□ -1.55
ACTN4O43707 CMYA5-201ENST00000446378 12847 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
ACTN4O43707 SOCS5-201ENST00000306503 4771 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
ACTN4O43707 PRG4-203ENST00000367485 4765 ntAPPRIS ALT2 TSL 5 BASIC5.37□□□□□ -1.55
ACTN4O43707 ZFPM2-203ENST00000517361 3300 ntTSL 2 BASIC5.37□□□□□ -1.55
ACTN4O43707 B3GNT5-201ENST00000326505 4123 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
ACTN4O43707 C4BPAP1-201ENST00000415474 1893 ntBASIC5.37□□□□□ -1.55
ACTN4O43707 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
ACTN4O43707 RNU6-1144P-201ENST00000384247 104 ntBASIC5.37□□□□□ -1.55
ACTN4O43707 Y_RNA.498-201ENST00000384460 102 ntBASIC5.37□□□□□ -1.55
ACTN4O43707 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
ACTN4O43707 U3.19-201ENST00000390893 196 ntBASIC5.37□□□□□ -1.55
ACTN4O43707 RPS27P18-201ENST00000431701 247 ntBASIC5.37□□□□□ -1.55
ACTN4O43707 AC073850.1-201ENST00000449243 255 ntBASIC5.37□□□□□ -1.55
ACTN4O43707 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC5.37□□□□□ -1.55
ACTN4O43707 RN7SKP66-201ENST00000516681 231 ntBASIC5.37□□□□□ -1.55
ACTN4O43707 RNU6-844P-201ENST00000517175 102 ntBASIC5.37□□□□□ -1.55
ACTN4O43707 MAL2-206ENST00000522187 547 ntTSL 4 BASIC5.37□□□□□ -1.55
ACTN4O43707 AC021269.2-201ENST00000532318 330 ntBASIC5.37□□□□□ -1.55
ACTN4O43707 AP004242.1-201ENST00000533701 349 ntBASIC5.37□□□□□ -1.55
ACTN4O43707 AC095350.2-201ENST00000544034 201 ntTSL 5 BASIC5.37□□□□□ -1.55
ACTN4O43707 LINC01584-202ENST00000563990 852 ntTSL 3 BASIC5.37□□□□□ -1.55
ACTN4O43707 MIR5699-201ENST00000578903 90 ntBASIC5.37□□□□□ -1.55
ACTN4O43707 AC008738.1-201ENST00000590117 375 ntTSL 5 BASIC5.37□□□□□ -1.55
ACTN4O43707 AC091932.3-201ENST00000624223 323 ntBASIC5.37□□□□□ -1.55
ACTN4O43707 AL034408.1-202ENST00000636088 415 ntBASIC5.37□□□□□ -1.55
ACTN4O43707 U6.99-201ENST00000637524 83 ntBASIC5.37□□□□□ -1.55
ACTN4O43707 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
ACTN4O43707 PSMA4-201ENST00000044462 4411 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
ACTN4O43707 SLC4A10-203ENST00000415876 5578 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
ACTN4O43707 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC5.37□□□□□ -1.55
ACTN4O43707 CDH17-201ENST00000027335 3693 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
ACTN4O43707 MAPK10-206ENST00000395161 4186 ntTSL 5 BASIC5.37□□□□□ -1.55
ACTN4O43707 STIL-204ENST00000396221 4558 ntAPPRIS ALT2 TSL 1 (best) BASIC5.36□□□□□ -1.55
ACTN4O43707 DAZ1-205ENST00000540248 3268 ntTSL 5 BASIC5.36□□□□□ -1.55
ACTN4O43707 SPART-202ENST00000438666 4789 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
ACTN4O43707 PTPN13-201ENST00000316707 7546 ntAPPRIS ALT2 TSL 1 (best) BASIC5.36□□□□□ -1.55
ACTN4O43707 CLVS1-205ENST00000519846 3622 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
ACTN4O43707 U2SURP-208ENST00000473835 7276 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
ACTN4O43707 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC5.36□□□□□ -1.55
ACTN4O43707 AL672167.1-203ENST00000641299 2975 ntBASIC5.36□□□□□ -1.55
ACTN4O43707 INPP4B-220ENST00000513000 8831 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
ACTN4O43707 OR1E2-201ENST00000248384 972 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
ACTN4O43707 RN7SKP104-201ENST00000362605 328 ntBASIC5.36□□□□□ -1.55
ACTN4O43707 RNU6-873P-201ENST00000363833 107 ntBASIC5.36□□□□□ -1.55
ACTN4O43707 SNORD115-8-201ENST00000363856 82 ntBASIC5.36□□□□□ -1.55
ACTN4O43707 SNORD115-38-201ENST00000365037 82 ntBASIC5.36□□□□□ -1.55
ACTN4O43707 SNORA22-201ENST00000383907 134 ntBASIC5.36□□□□□ -1.55
ACTN4O43707 RNU6-763P-201ENST00000390865 106 ntBASIC5.36□□□□□ -1.55
ACTN4O43707 U3.37-201ENST00000408528 213 ntBASIC5.36□□□□□ -1.55
ACTN4O43707 RNU2-68P-201ENST00000410878 191 ntBASIC5.36□□□□□ -1.55
ACTN4O43707 NDUFB4P7-201ENST00000423198 363 ntBASIC5.36□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 104.9 ms