Protein–RNA interactions for Protein: O00570

SOX1, Transcription factor SOX-1, humanhuman

Predicted RBP Predictions only

Length 391 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1O00570 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC4.56□□□□□ -1.68
SOX1O00570 SERF1AP1-201ENST00000514575 187 ntBASIC4.56□□□□□ -1.68
SOX1O00570 SCARNA15.2-201ENST00000516409 127 ntBASIC4.56□□□□□ -1.68
SOX1O00570 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC4.56□□□□□ -1.68
SOX1O00570 HMGB1P14-201ENST00000557424 591 ntBASIC4.56□□□□□ -1.68
SOX1O00570 MIR4458-201ENST00000578872 75 ntBASIC4.56□□□□□ -1.68
SOX1O00570 MIR3133-201ENST00000583157 78 ntBASIC4.56□□□□□ -1.68
SOX1O00570 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC4.56□□□□□ -1.68
SOX1O00570 AC240442.1-201ENST00000616055 283 ntBASIC4.56□□□□□ -1.68
SOX1O00570 PATJ-213ENST00000613764 4172 ntTSL 5 BASIC4.56□□□□□ -1.68
SOX1O00570 OR5A1-202ENST00000641045 8612 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
SOX1O00570 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC4.56□□□□□ -1.68
SOX1O00570 PPEF1-201ENST00000349874 2687 ntTSL 5 BASIC4.56□□□□□ -1.68
SOX1O00570 ANKRD36BP1-201ENST00000358576 1779 ntBASIC4.55□□□□□ -1.68
SOX1O00570 AP001642.1-201ENST00000624727 2117 ntBASIC4.55□□□□□ -1.68
SOX1O00570 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
SOX1O00570 ASNSP1-201ENST00000518311 1939 ntBASIC4.55□□□□□ -1.68
SOX1O00570 AC007785.2-201ENST00000598627 1916 ntBASIC4.55□□□□□ -1.68
SOX1O00570 RNU6-428P-201ENST00000362942 107 ntBASIC4.55□□□□□ -1.68
SOX1O00570 RNU6-187P-201ENST00000384139 106 ntBASIC4.55□□□□□ -1.68
SOX1O00570 TRAV9-2-201ENST00000390441 394 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
SOX1O00570 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
SOX1O00570 CTSL3P-202ENST00000412179 788 ntBASIC4.55□□□□□ -1.68
SOX1O00570 AL691449.1-201ENST00000426570 421 ntBASIC4.55□□□□□ -1.68
SOX1O00570 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC4.55□□□□□ -1.68
SOX1O00570 AL591623.2-201ENST00000449978 222 ntBASIC4.55□□□□□ -1.68
SOX1O00570 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC4.55□□□□□ -1.68
SOX1O00570 RNU7-120P-201ENST00000459334 63 ntBASIC4.55□□□□□ -1.68
SOX1O00570 SNORA25.14-201ENST00000516481 132 ntBASIC4.55□□□□□ -1.68
SOX1O00570 Y_RNA.703-201ENST00000516846 111 ntBASIC4.55□□□□□ -1.68
SOX1O00570 CBX3P4-201ENST00000538909 354 ntBASIC4.55□□□□□ -1.68
SOX1O00570 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC4.55□□□□□ -1.68
SOX1O00570 LINC01584-202ENST00000563990 852 ntTSL 3 BASIC4.55□□□□□ -1.68
SOX1O00570 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC4.55□□□□□ -1.68
SOX1O00570 MIR4643-201ENST00000577473 78 ntBASIC4.55□□□□□ -1.68
SOX1O00570 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
SOX1O00570 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC4.55□□□□□ -1.68
SOX1O00570 OR8B3-202ENST00000641139 2170 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
SOX1O00570 STARD4-201ENST00000296632 4606 ntAPPRIS P1 TSL 2 BASIC4.55□□□□□ -1.68
SOX1O00570 MPHOSPH9-211ENST00000541076 6136 ntAPPRIS ALT2 TSL 5 BASIC4.55□□□□□ -1.68
SOX1O00570 HGF-201ENST00000222390 5989 ntAPPRIS P3 TSL 1 (best) BASIC4.55□□□□□ -1.68
SOX1O00570 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC4.55□□□□□ -1.68
SOX1O00570 PCDH9-201ENST00000377861 28227 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
SOX1O00570 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC4.54□□□□□ -1.68
SOX1O00570 SAMD12-202ENST00000409003 8866 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
SOX1O00570 FMN1-202ENST00000334528 12355 ntAPPRIS P3 TSL 1 (best) BASIC4.54□□□□□ -1.68
SOX1O00570 FANCD2-202ENST00000383807 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC4.54□□□□□ -1.68
SOX1O00570 Y_RNA.123-201ENST00000363338 102 ntBASIC4.54□□□□□ -1.68
SOX1O00570 SNORD113-8-201ENST00000363497 74 ntBASIC4.54□□□□□ -1.68
SOX1O00570 AL079342.1-201ENST00000401460 267 ntBASIC4.54□□□□□ -1.68
SOX1O00570 Y_RNA.602-201ENST00000410535 92 ntBASIC4.54□□□□□ -1.68
SOX1O00570 AC007738.1-201ENST00000413892 348 ntBASIC4.54□□□□□ -1.68
SOX1O00570 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC4.54□□□□□ -1.68
SOX1O00570 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC4.54□□□□□ -1.68
SOX1O00570 RPL21P40-201ENST00000428586 483 ntBASIC4.54□□□□□ -1.68
SOX1O00570 RNA5SP497-201ENST00000516081 97 ntBASIC4.54□□□□□ -1.68
SOX1O00570 RNU6-1012P-201ENST00000516606 109 ntBASIC4.54□□□□□ -1.68
SOX1O00570 MAL2-206ENST00000522187 547 ntTSL 4 BASIC4.54□□□□□ -1.68
SOX1O00570 AC005868.1-201ENST00000536421 331 ntBASIC4.54□□□□□ -1.68
SOX1O00570 MIR3921-201ENST00000577308 85 ntBASIC4.54□□□□□ -1.68
SOX1O00570 BPIFA4P-203ENST00000603168 689 ntBASIC4.54□□□□□ -1.68
SOX1O00570 B3GNTL1P2-201ENST00000603673 288 ntBASIC4.54□□□□□ -1.68
SOX1O00570 AC073657.2-201ENST00000605661 303 ntBASIC4.54□□□□□ -1.68
SOX1O00570 AC090617.7-201ENST00000623952 126 ntBASIC4.54□□□□□ -1.68
SOX1O00570 ACE2-202ENST00000427411 3507 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
SOX1O00570 UGP2-229ENST00000613823 1858 ntAPPRIS ALT1 TSL 5 BASIC4.54□□□□□ -1.68
SOX1O00570 OR10Z1-202ENST00000641002 6323 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
SOX1O00570 NLRC4-203ENST00000402280 3355 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
SOX1O00570 PARP11-203ENST00000427057 4406 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
SOX1O00570 RASA1-205ENST00000512763 3060 ntAPPRIS ALT2 TSL 2 BASIC4.53□□□□□ -1.68
SOX1O00570 B3GALT2-201ENST00000367434 3274 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
SOX1O00570 ZPLD1-202ENST00000466937 1531 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
SOX1O00570 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
SOX1O00570 DCDC1-211ENST00000597505 5352 ntAPPRIS ALT2 TSL 5 BASIC4.53□□□□□ -1.68
SOX1O00570 Y_RNA.510-201ENST00000384511 114 ntBASIC4.53□□□□□ -1.68
SOX1O00570 SNORA68.2-201ENST00000391263 128 ntBASIC4.53□□□□□ -1.68
SOX1O00570 SNORA40C-201ENST00000391285 128 ntBASIC4.53□□□□□ -1.68
SOX1O00570 Z85995.1-201ENST00000415547 335 ntBASIC4.53□□□□□ -1.68
SOX1O00570 AL592078.1-201ENST00000421866 321 ntTSL 3 BASIC4.53□□□□□ -1.68
SOX1O00570 AC104333.2-201ENST00000422630 192 ntBASIC4.53□□□□□ -1.68
SOX1O00570 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC4.53□□□□□ -1.68
SOX1O00570 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC4.53□□□□□ -1.68
SOX1O00570 RPL35AP15-201ENST00000468042 339 ntBASIC4.53□□□□□ -1.68
SOX1O00570 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC4.53□□□□□ -1.68
SOX1O00570 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC4.53□□□□□ -1.68
SOX1O00570 RNU6-255P-201ENST00000516957 105 ntBASIC4.53□□□□□ -1.68
SOX1O00570 RNA5SP290-201ENST00000517133 127 ntBASIC4.53□□□□□ -1.68
SOX1O00570 TRAPPC2P2-201ENST00000517589 409 ntBASIC4.53□□□□□ -1.68
SOX1O00570 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC4.53□□□□□ -1.68
SOX1O00570 AP002392.1-201ENST00000537692 208 ntBASIC4.53□□□□□ -1.68
SOX1O00570 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC4.53□□□□□ -1.68
SOX1O00570 AC090617.3-201ENST00000573670 475 ntBASIC4.53□□□□□ -1.68
SOX1O00570 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC4.53□□□□□ -1.68
SOX1O00570 AL021997.2-201ENST00000615674 271 ntBASIC4.53□□□□□ -1.68
SOX1O00570 U2.14-201ENST00000615943 113 ntBASIC4.53□□□□□ -1.68
SOX1O00570 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC4.53□□□□□ -1.68
SOX1O00570 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC4.53□□□□□ -1.68
SOX1O00570 AC004925.1-201ENST00000624256 2706 ntBASIC4.53□□□□□ -1.68
SOX1O00570 KIAA0586-202ENST00000354386 5226 ntAPPRIS ALT2 TSL 2 BASIC4.53□□□□□ -1.68
SOX1O00570 TM4SF1-202ENST00000472441 3115 ntTSL 2 BASIC4.53□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 84.4 ms