Protein–RNA interactions for Protein: O00555

CACNA1A, Voltage-dependent P/Q-type calcium channel subunit alpha-1A, humanhuman

Predictions only

Length 2,505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1AO00555 MTCYBP41-201ENST00000528913 1123 ntBASIC0.43□□□□□ -2.34
CACNA1AO00555 AC090666.1-201ENST00000578241 445 ntBASIC0.43□□□□□ -2.34
CACNA1AO00555 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC0.43□□□□□ -2.34
CACNA1AO00555 AC010615.1-201ENST00000594254 1764 ntBASIC0.43□□□□□ -2.34
CACNA1AO00555 RNU6-697P-201ENST00000363348 107 ntBASIC0.42□□□□□ -2.34
CACNA1AO00555 RNU6-1251P-201ENST00000364502 107 ntBASIC0.42□□□□□ -2.34
CACNA1AO00555 RNU6-532P-201ENST00000384318 107 ntBASIC0.42□□□□□ -2.34
CACNA1AO00555 RNU6-1297P-201ENST00000384415 104 ntBASIC0.42□□□□□ -2.34
CACNA1AO00555 RNU6-837P-201ENST00000391056 108 ntBASIC0.42□□□□□ -2.34
CACNA1AO00555 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.42□□□□□ -2.34
CACNA1AO00555 RNA5SP450-201ENST00000411206 102 ntBASIC0.42□□□□□ -2.34
CACNA1AO00555 SEPT2P1-201ENST00000419651 180 ntBASIC0.42□□□□□ -2.34
CACNA1AO00555 ARL2BPP3-201ENST00000421226 480 ntBASIC0.42□□□□□ -2.34
CACNA1AO00555 OR51AB1P-201ENST00000429046 620 ntBASIC0.42□□□□□ -2.34
CACNA1AO00555 RABEPKP1-201ENST00000440529 1026 ntBASIC0.42□□□□□ -2.34
CACNA1AO00555 NDUFB4P10-201ENST00000452541 359 ntBASIC0.42□□□□□ -2.34
CACNA1AO00555 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC0.42□□□□□ -2.34
CACNA1AO00555 HNRNPDLP3-201ENST00000456745 380 ntBASIC0.42□□□□□ -2.34
CACNA1AO00555 AC004062.1-201ENST00000509926 645 ntBASIC0.42□□□□□ -2.34
CACNA1AO00555 TPT1P8-201ENST00000510120 555 ntBASIC0.42□□□□□ -2.34
CACNA1AO00555 RNU4-57P-201ENST00000515980 135 ntBASIC0.42□□□□□ -2.34
CACNA1AO00555 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC0.42□□□□□ -2.34
CACNA1AO00555 AC004923.2-201ENST00000529649 369 ntBASIC0.42□□□□□ -2.34
CACNA1AO00555 AC118273.2-201ENST00000532092 465 ntBASIC0.42□□□□□ -2.34
CACNA1AO00555 OR5AL2P-201ENST00000532185 920 ntBASIC0.42□□□□□ -2.34
CACNA1AO00555 MGST1-215ENST00000540056 546 ntTSL 3 BASIC0.42□□□□□ -2.34
CACNA1AO00555 MTCYBP23-201ENST00000558717 1102 ntBASIC0.42□□□□□ -2.34
CACNA1AO00555 MIR3609-201ENST00000582661 80 ntBASIC0.42□□□□□ -2.34
CACNA1AO00555 AC105094.2-203ENST00000590357 555 ntTSL 4 BASIC0.42□□□□□ -2.34
CACNA1AO00555 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC0.42□□□□□ -2.34
CACNA1AO00555 AC018755.4-201ENST00000619715 454 ntBASIC0.42□□□□□ -2.34
CACNA1AO00555 PHF11-215ENST00000488958 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC0.42□□□□□ -2.34
CACNA1AO00555 LINC01967-201ENST00000356047 755 ntTSL 5 BASIC0.42□□□□□ -2.34
CACNA1AO00555 RNU6-263P-201ENST00000363811 107 ntBASIC0.42□□□□□ -2.34
CACNA1AO00555 BX248415.1-201ENST00000367421 1043 ntAPPRIS P1 TSL 1 (best) BASIC0.42□□□□□ -2.34
CACNA1AO00555 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC0.42□□□□□ -2.34
CACNA1AO00555 RNU6-244P-201ENST00000391028 104 ntBASIC0.42□□□□□ -2.34
CACNA1AO00555 AL162394.1-201ENST00000413271 419 ntTSL 2 BASIC0.42□□□□□ -2.34
CACNA1AO00555 MTND4P11-201ENST00000417020 1058 ntBASIC0.42□□□□□ -2.34
CACNA1AO00555 AC133963.2-201ENST00000513686 578 ntBASIC0.42□□□□□ -2.34
CACNA1AO00555 AC016065.2-201ENST00000514530 444 ntBASIC0.42□□□□□ -2.34
CACNA1AO00555 AC092470.1-201ENST00000546187 132 ntBASIC0.42□□□□□ -2.34
CACNA1AO00555 AC092474.3-201ENST00000603022 568 ntBASIC0.42□□□□□ -2.34
CACNA1AO00555 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC0.42□□□□□ -2.34
CACNA1AO00555 Y_RNA.190-201ENST00000363964 101 ntBASIC0.41□□□□□ -2.34
CACNA1AO00555 RNU6-1293P-201ENST00000384077 107 ntBASIC0.41□□□□□ -2.34
CACNA1AO00555 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC0.41□□□□□ -2.34
CACNA1AO00555 MTCYBP34-201ENST00000439552 670 ntBASIC0.41□□□□□ -2.34
CACNA1AO00555 MTATP6P23-201ENST00000440153 476 ntBASIC0.41□□□□□ -2.34
CACNA1AO00555 AC016751.2-201ENST00000453206 280 ntTSL 5 BASIC0.41□□□□□ -2.34
CACNA1AO00555 LNCSRLR-201ENST00000490375 709 ntTSL 3 BASIC0.41□□□□□ -2.34
CACNA1AO00555 PDC-202ENST00000497198 1174 ntTSL 1 (best) BASIC0.41□□□□□ -2.34
CACNA1AO00555 GIN1-203ENST00000508629 1040 ntTSL 1 (best) BASIC0.41□□□□□ -2.34
CACNA1AO00555 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC0.41□□□□□ -2.34
CACNA1AO00555 AC006116.4-201ENST00000589671 452 ntTSL 2 BASIC0.41□□□□□ -2.34
CACNA1AO00555 AP000873.2-201ENST00000602381 406 ntTSL 2 BASIC0.41□□□□□ -2.34
CACNA1AO00555 DUSP12P1-201ENST00000612874 516 ntBASIC0.41□□□□□ -2.34
CACNA1AO00555 AL773524.1-201ENST00000614065 229 ntBASIC0.41□□□□□ -2.34
CACNA1AO00555 RNU6-156P-201ENST00000621869 107 ntBASIC0.41□□□□□ -2.34
CACNA1AO00555 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC0.41□□□□□ -2.34
CACNA1AO00555 Y_RNA.346-201ENST00000365385 112 ntBASIC0.41□□□□□ -2.34
CACNA1AO00555 SNORD26-201ENST00000384147 75 ntBASIC0.41□□□□□ -2.34
CACNA1AO00555 MIR92A1-201ENST00000385233 78 ntBASIC0.41□□□□□ -2.34
CACNA1AO00555 RNU6-370P-201ENST00000411008 104 ntBASIC0.41□□□□□ -2.34
CACNA1AO00555 MTCYBP24-201ENST00000420387 1106 ntBASIC0.41□□□□□ -2.34
CACNA1AO00555 RPL7L1P10-201ENST00000427790 463 ntBASIC0.41□□□□□ -2.34
CACNA1AO00555 TRAPPC13P1-201ENST00000435991 1062 ntBASIC0.41□□□□□ -2.34
CACNA1AO00555 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC0.41□□□□□ -2.34
CACNA1AO00555 CYCTP-201ENST00000504253 315 ntBASIC0.41□□□□□ -2.34
CACNA1AO00555 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC0.41□□□□□ -2.34
CACNA1AO00555 RNU6-138P-201ENST00000515952 107 ntBASIC0.41□□□□□ -2.34
CACNA1AO00555 SNORA31.8-201ENST00000516327 108 ntBASIC0.41□□□□□ -2.34
CACNA1AO00555 AC117505.1-202ENST00000547027 566 ntTSL 3 BASIC0.41□□□□□ -2.34
CACNA1AO00555 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC0.41□□□□□ -2.34
CACNA1AO00555 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC0.41□□□□□ -2.34
CACNA1AO00555 AL157938.2-209ENST00000589128 792 ntTSL 2 BASIC0.41□□□□□ -2.34
CACNA1AO00555 ZNF382-210ENST00000639288 834 ntTSL 5 BASIC0.41□□□□□ -2.34
CACNA1AO00555 Y_RNA.53-201ENST00000362765 102 ntBASIC0.4□□□□□ -2.34
CACNA1AO00555 SNORA3A-201ENST00000364113 130 ntBASIC0.4□□□□□ -2.34
CACNA1AO00555 MIR635-201ENST00000384830 98 ntBASIC0.4□□□□□ -2.34
CACNA1AO00555 RNU6-193P-201ENST00000410977 107 ntBASIC0.4□□□□□ -2.34
CACNA1AO00555 AC245047.4-201ENST00000433189 144 ntBASIC0.4□□□□□ -2.34
CACNA1AO00555 RPL39P29-201ENST00000447779 157 ntBASIC0.4□□□□□ -2.34
CACNA1AO00555 HRAT17-201ENST00000447785 547 ntTSL 4 BASIC0.4□□□□□ -2.34
CACNA1AO00555 snoU13.4-201ENST00000458916 104 ntBASIC0.4□□□□□ -2.34
CACNA1AO00555 AC015908.1-201ENST00000478739 476 ntBASIC0.4□□□□□ -2.34
CACNA1AO00555 RPS27P26-201ENST00000494583 239 ntBASIC0.4□□□□□ -2.34
CACNA1AO00555 AC108157.1-201ENST00000510511 539 ntBASIC0.4□□□□□ -2.34
CACNA1AO00555 SCARNA21.1-201ENST00000515996 128 ntBASIC0.4□□□□□ -2.34
CACNA1AO00555 RNU2-19P-201ENST00000517288 84 ntBASIC0.4□□□□□ -2.34
CACNA1AO00555 RERG-IT1-201ENST00000539734 301 ntTSL 3 BASIC0.4□□□□□ -2.34
CACNA1AO00555 AL157871.3-201ENST00000557231 293 ntBASIC0.4□□□□□ -2.34
CACNA1AO00555 MIR4287-201ENST00000579398 78 ntBASIC0.4□□□□□ -2.34
CACNA1AO00555 AC090616.5-201ENST00000581225 299 ntTSL 5 BASIC0.4□□□□□ -2.34
CACNA1AO00555 AC006963.1-201ENST00000624003 1052 ntBASIC0.4□□□□□ -2.34
CACNA1AO00555 SATB1-AS1-258ENST00000629405 664 ntTSL 5 BASIC0.4□□□□□ -2.34
CACNA1AO00555 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC0.4□□□□□ -2.34
CACNA1AO00555 RNU1-105P-201ENST00000363470 161 ntBASIC0.4□□□□□ -2.35
CACNA1AO00555 SNORA63D-201ENST00000364359 132 ntBASIC0.4□□□□□ -2.35
CACNA1AO00555 PIGPP2-201ENST00000411569 458 ntBASIC0.4□□□□□ -2.35
Retrieved 100 of 98,524 protein–RNA pairs in 133.1 ms