Protein–RNA interactions for Protein: H3BSU7

TMX2-CTNND1, TMX2-CTNND1 readthrough (NMD candidate), humanhuman

Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMX2-CTNND1H3BSU7 RNU6-169P-201ENST00000365336 107 ntBASIC2.09□□□□□ -2.07
TMX2-CTNND1H3BSU7 RNU5E-6P-201ENST00000365574 115 ntBASIC2.09□□□□□ -2.07
TMX2-CTNND1H3BSU7 RPL23AP32-201ENST00000395315 459 ntBASIC2.09□□□□□ -2.07
TMX2-CTNND1H3BSU7 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.07
TMX2-CTNND1H3BSU7 AC019129.1-201ENST00000403786 261 ntBASIC2.09□□□□□ -2.07
TMX2-CTNND1H3BSU7 FCF1P10-201ENST00000407590 479 ntBASIC2.09□□□□□ -2.07
TMX2-CTNND1H3BSU7 MIR1290-201ENST00000408735 78 ntBASIC2.09□□□□□ -2.07
TMX2-CTNND1H3BSU7 VN1R108P-201ENST00000431580 830 ntBASIC2.09□□□□□ -2.07
TMX2-CTNND1H3BSU7 AL353706.1-201ENST00000436728 494 ntBASIC2.09□□□□□ -2.07
TMX2-CTNND1H3BSU7 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC2.09□□□□□ -2.07
TMX2-CTNND1H3BSU7 AC233279.1-201ENST00000455300 423 ntBASIC2.09□□□□□ -2.07
TMX2-CTNND1H3BSU7 AC010099.1-201ENST00000455434 375 ntBASIC2.09□□□□□ -2.07
TMX2-CTNND1H3BSU7 TRBV1-201ENST00000476502 284 ntBASIC2.09□□□□□ -2.07
TMX2-CTNND1H3BSU7 AC079140.3-201ENST00000511111 550 ntBASIC2.09□□□□□ -2.07
TMX2-CTNND1H3BSU7 MTND5P13-201ENST00000513046 1079 ntBASIC2.09□□□□□ -2.07
TMX2-CTNND1H3BSU7 Y_RNA.672-201ENST00000516289 104 ntBASIC2.09□□□□□ -2.07
TMX2-CTNND1H3BSU7 RNU6-1282P-201ENST00000516735 96 ntBASIC2.09□□□□□ -2.07
TMX2-CTNND1H3BSU7 HMGN1P28-201ENST00000521340 364 ntBASIC2.09□□□□□ -2.07
TMX2-CTNND1H3BSU7 AC022616.3-201ENST00000523940 148 ntBASIC2.09□□□□□ -2.07
TMX2-CTNND1H3BSU7 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC2.09□□□□□ -2.07
TMX2-CTNND1H3BSU7 RPS3AP4-201ENST00000555161 764 ntBASIC2.09□□□□□ -2.07
TMX2-CTNND1H3BSU7 LINC02311-202ENST00000556819 477 ntTSL 3 BASIC2.09□□□□□ -2.07
TMX2-CTNND1H3BSU7 AC009127.3-201ENST00000570531 403 ntBASIC2.09□□□□□ -2.07
TMX2-CTNND1H3BSU7 MIR4528-201ENST00000577763 90 ntBASIC2.09□□□□□ -2.07
TMX2-CTNND1H3BSU7 AC012593.1-213ENST00000587255 510 ntTSL 5 BASIC2.09□□□□□ -2.07
TMX2-CTNND1H3BSU7 BNIP3P8-201ENST00000597863 560 ntBASIC2.09□□□□□ -2.07
TMX2-CTNND1H3BSU7 AL359999.1-201ENST00000604513 294 ntBASIC2.09□□□□□ -2.07
TMX2-CTNND1H3BSU7 AC090578.1-201ENST00000604955 591 ntBASIC2.09□□□□□ -2.07
TMX2-CTNND1H3BSU7 AL136363.1-201ENST00000605349 337 ntBASIC2.09□□□□□ -2.07
TMX2-CTNND1H3BSU7 AC121334.2-201ENST00000605387 271 ntBASIC2.09□□□□□ -2.07
TMX2-CTNND1H3BSU7 AC090970.3-201ENST00000612566 866 ntBASIC2.09□□□□□ -2.07
TMX2-CTNND1H3BSU7 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC2.09□□□□□ -2.07
TMX2-CTNND1H3BSU7 AC009090.3-201ENST00000616553 565 ntBASIC2.09□□□□□ -2.07
TMX2-CTNND1H3BSU7 AL353997.5-201ENST00000618886 171 ntBASIC2.09□□□□□ -2.07
TMX2-CTNND1H3BSU7 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC2.09□□□□□ -2.07
TMX2-CTNND1H3BSU7 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC2.09□□□□□ -2.08
TMX2-CTNND1H3BSU7 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
TMX2-CTNND1H3BSU7 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
TMX2-CTNND1H3BSU7 Y_RNA.22-201ENST00000362492 102 ntBASIC2.08□□□□□ -2.08
TMX2-CTNND1H3BSU7 RNU5F-7P-201ENST00000363696 115 ntBASIC2.08□□□□□ -2.08
TMX2-CTNND1H3BSU7 SMIM11P1-201ENST00000369586 178 ntBASIC2.08□□□□□ -2.08
TMX2-CTNND1H3BSU7 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC2.08□□□□□ -2.08
TMX2-CTNND1H3BSU7 RNU6-39P-201ENST00000384344 107 ntBASIC2.08□□□□□ -2.08
TMX2-CTNND1H3BSU7 RNA5SP252-201ENST00000391131 119 ntBASIC2.08□□□□□ -2.08
TMX2-CTNND1H3BSU7 DEFB108C-201ENST00000400154 252 ntBASIC2.08□□□□□ -2.08
TMX2-CTNND1H3BSU7 GSTA9P-201ENST00000406231 611 ntBASIC2.08□□□□□ -2.08
TMX2-CTNND1H3BSU7 RNU2-33P-201ENST00000410344 192 ntBASIC2.08□□□□□ -2.08
TMX2-CTNND1H3BSU7 RNU6-195P-201ENST00000411352 109 ntBASIC2.08□□□□□ -2.08
TMX2-CTNND1H3BSU7 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC2.08□□□□□ -2.08
TMX2-CTNND1H3BSU7 SPA17P1-201ENST00000416656 452 ntBASIC2.08□□□□□ -2.08
TMX2-CTNND1H3BSU7 MTND3P17-201ENST00000416968 344 ntBASIC2.08□□□□□ -2.08
TMX2-CTNND1H3BSU7 SEPT2P1-201ENST00000419651 180 ntBASIC2.08□□□□□ -2.08
TMX2-CTNND1H3BSU7 AC006366.1-201ENST00000422002 759 ntBASIC2.08□□□□□ -2.08
TMX2-CTNND1H3BSU7 AL512656.1-201ENST00000427492 401 ntTSL 2 BASIC2.08□□□□□ -2.08
TMX2-CTNND1H3BSU7 AC093106.2-201ENST00000428212 385 ntBASIC2.08□□□□□ -2.08
TMX2-CTNND1H3BSU7 SRIP2-201ENST00000428470 166 ntBASIC2.08□□□□□ -2.08
TMX2-CTNND1H3BSU7 AC020571.1-201ENST00000430904 768 ntTSL 2 BASIC2.08□□□□□ -2.08
TMX2-CTNND1H3BSU7 PCYT1B-AS1-201ENST00000432626 275 ntTSL 2 BASIC2.08□□□□□ -2.08
TMX2-CTNND1H3BSU7 SSXP1-201ENST00000453640 473 ntBASIC2.08□□□□□ -2.08
TMX2-CTNND1H3BSU7 AL033528.1-201ENST00000453780 140 ntBASIC2.08□□□□□ -2.08
TMX2-CTNND1H3BSU7 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC2.08□□□□□ -2.08
TMX2-CTNND1H3BSU7 TPT1P7-201ENST00000458300 517 ntBASIC2.08□□□□□ -2.08
TMX2-CTNND1H3BSU7 RPL31P3-201ENST00000458430 332 ntBASIC2.08□□□□□ -2.08
TMX2-CTNND1H3BSU7 AC087588.1-201ENST00000462203 316 ntBASIC2.08□□□□□ -2.08
TMX2-CTNND1H3BSU7 AC010424.1-201ENST00000506336 297 ntBASIC2.08□□□□□ -2.08
TMX2-CTNND1H3BSU7 ARL2BPP4-201ENST00000506854 471 ntBASIC2.08□□□□□ -2.08
TMX2-CTNND1H3BSU7 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC2.08□□□□□ -2.08
TMX2-CTNND1H3BSU7 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
TMX2-CTNND1H3BSU7 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC2.08□□□□□ -2.08
TMX2-CTNND1H3BSU7 RNA5SP471-201ENST00000516971 106 ntBASIC2.08□□□□□ -2.08
TMX2-CTNND1H3BSU7 AC107909.2-201ENST00000520844 493 ntTSL 3 BASIC2.08□□□□□ -2.08
TMX2-CTNND1H3BSU7 AC108471.2-204ENST00000526807 784 ntTSL 5 BASIC2.08□□□□□ -2.08
TMX2-CTNND1H3BSU7 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC2.08□□□□□ -2.08
TMX2-CTNND1H3BSU7 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC2.08□□□□□ -2.08
TMX2-CTNND1H3BSU7 AC093012.1-202ENST00000549403 582 ntBASIC2.08□□□□□ -2.08
TMX2-CTNND1H3BSU7 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC2.08□□□□□ -2.08
TMX2-CTNND1H3BSU7 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC2.08□□□□□ -2.08
TMX2-CTNND1H3BSU7 TRAV28-201ENST00000557548 323 ntBASIC2.08□□□□□ -2.08
TMX2-CTNND1H3BSU7 MIR3913-1-201ENST00000577744 102 ntBASIC2.08□□□□□ -2.08
TMX2-CTNND1H3BSU7 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC2.08□□□□□ -2.08
TMX2-CTNND1H3BSU7 AC007363.1-201ENST00000604736 620 ntBASIC2.08□□□□□ -2.08
TMX2-CTNND1H3BSU7 AC245008.1-201ENST00000608123 476 ntBASIC2.08□□□□□ -2.08
TMX2-CTNND1H3BSU7 AC245884.12-201ENST00000615364 59 ntBASIC2.08□□□□□ -2.08
TMX2-CTNND1H3BSU7 AP001506.1-201ENST00000615444 211 ntBASIC2.08□□□□□ -2.08
TMX2-CTNND1H3BSU7 AL049641.1-201ENST00000441055 1948 ntBASIC2.08□□□□□ -2.08
TMX2-CTNND1H3BSU7 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
TMX2-CTNND1H3BSU7 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
TMX2-CTNND1H3BSU7 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC2.08□□□□□ -2.08
TMX2-CTNND1H3BSU7 CR848007.1-201ENST00000442354 1699 ntBASIC2.08□□□□□ -2.08
TMX2-CTNND1H3BSU7 SET-203ENST00000372688 801 ntTSL 2 BASIC2.07□□□□□ -2.08
TMX2-CTNND1H3BSU7 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
TMX2-CTNND1H3BSU7 RNU6-217P-201ENST00000384164 104 ntBASIC2.07□□□□□ -2.08
TMX2-CTNND1H3BSU7 RNU4-52P-201ENST00000384209 138 ntBASIC2.07□□□□□ -2.08
TMX2-CTNND1H3BSU7 RNU6-278P-201ENST00000390945 109 ntBASIC2.07□□□□□ -2.08
TMX2-CTNND1H3BSU7 RNU6ATAC38P-201ENST00000408119 126 ntBASIC2.07□□□□□ -2.08
TMX2-CTNND1H3BSU7 AL365356.1-201ENST00000411512 736 ntTSL 3 BASIC2.07□□□□□ -2.08
TMX2-CTNND1H3BSU7 ELOCP17-201ENST00000414751 326 ntBASIC2.07□□□□□ -2.08
TMX2-CTNND1H3BSU7 AC000123.1-201ENST00000418215 516 ntTSL 5 BASIC2.07□□□□□ -2.08
TMX2-CTNND1H3BSU7 ACTR3BP6-201ENST00000422332 1241 ntBASIC2.07□□□□□ -2.08
TMX2-CTNND1H3BSU7 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC2.07□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 93.1 ms