Protein–RNA interactions for Protein: H3BM21

Integrin beta (Fragment), humanhuman

Predictions only

Length 787 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3BM21 MTHFD2P2-201ENST00000407725 247 ntBASIC4.89□□□□□ -1.63
H3BM21 RN7SKP16-201ENST00000410180 299 ntBASIC4.89□□□□□ -1.63
H3BM21 AC016397.1-201ENST00000412463 242 ntBASIC4.89□□□□□ -1.63
H3BM21 AC119751.6-201ENST00000416712 186 ntBASIC4.89□□□□□ -1.63
H3BM21 GAS5-208ENST00000425771 242 ntTSL 3 BASIC4.89□□□□□ -1.63
H3BM21 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC4.89□□□□□ -1.63
H3BM21 AL450023.3-201ENST00000440592 271 ntBASIC4.89□□□□□ -1.63
H3BM21 RPL7AP61-201ENST00000443410 636 ntBASIC4.89□□□□□ -1.63
H3BM21 AL691482.1-201ENST00000453255 87 ntBASIC4.89□□□□□ -1.63
H3BM21 snoU109.4-201ENST00000458953 143 ntBASIC4.89□□□□□ -1.63
H3BM21 NIP7P2-201ENST00000485801 544 ntBASIC4.89□□□□□ -1.63
H3BM21 CREM-238ENST00000488741 651 ntTSL 2 BASIC4.89□□□□□ -1.63
H3BM21 FTH1P24-201ENST00000503502 462 ntBASIC4.89□□□□□ -1.63
H3BM21 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC4.89□□□□□ -1.63
H3BM21 AP001999.2-201ENST00000529417 389 ntTSL 3 BASIC4.89□□□□□ -1.63
H3BM21 MIR4472-2-201ENST00000582069 67 ntBASIC4.89□□□□□ -1.63
H3BM21 MIR3936-201ENST00000584304 110 ntBASIC4.89□□□□□ -1.63
H3BM21 Metazoa_SRP.193-201ENST00000622007 277 ntBASIC4.89□□□□□ -1.63
H3BM21 AC048347.1-201ENST00000624621 427 ntBASIC4.89□□□□□ -1.63
H3BM21 KLHL4-202ENST00000373119 5818 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
H3BM21 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC4.89□□□□□ -1.63
H3BM21 AC118758.3-201ENST00000624628 24137 ntTSL 5 BASIC4.89□□□□□ -1.63
H3BM21 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC4.88□□□□□ -1.63
H3BM21 WEE2-201ENST00000397541 3061 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
H3BM21 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
H3BM21 SCN11A-203ENST00000456224 5262 ntAPPRIS ALT2 TSL 5 BASIC4.88□□□□□ -1.63
H3BM21 Y_RNA.33-201ENST00000362591 102 ntBASIC4.88□□□□□ -1.63
H3BM21 RNU6-1164P-201ENST00000364428 107 ntBASIC4.88□□□□□ -1.63
H3BM21 RNU6-643P-201ENST00000384018 107 ntBASIC4.88□□□□□ -1.63
H3BM21 RNU6-281P-201ENST00000384212 103 ntBASIC4.88□□□□□ -1.63
H3BM21 RNU6-880P-201ENST00000384526 107 ntBASIC4.88□□□□□ -1.63
H3BM21 RNU6-763P-201ENST00000390865 106 ntBASIC4.88□□□□□ -1.63
H3BM21 MIR298-201ENST00000401212 88 ntBASIC4.88□□□□□ -1.63
H3BM21 AC118345.1-201ENST00000411785 366 ntTSL 3 BASIC4.88□□□□□ -1.63
H3BM21 AC007738.1-201ENST00000413892 348 ntBASIC4.88□□□□□ -1.63
H3BM21 AC006369.1-201ENST00000419425 548 ntTSL 3 BASIC4.88□□□□□ -1.63
H3BM21 AL714022.1-201ENST00000439897 151 ntBASIC4.88□□□□□ -1.63
H3BM21 AC124916.1-201ENST00000444020 547 ntBASIC4.88□□□□□ -1.63
H3BM21 AC073264.2-201ENST00000448886 166 ntBASIC4.88□□□□□ -1.63
H3BM21 AL121914.1-201ENST00000450188 156 ntBASIC4.88□□□□□ -1.63
H3BM21 U8.19-201ENST00000459095 133 ntBASIC4.88□□□□□ -1.63
H3BM21 AC008897.1-201ENST00000494006 347 ntBASIC4.88□□□□□ -1.63
H3BM21 AC104164.2-201ENST00000496953 495 ntBASIC4.88□□□□□ -1.63
H3BM21 APOOP4-201ENST00000513530 597 ntBASIC4.88□□□□□ -1.63
H3BM21 AC022915.1-201ENST00000521660 289 ntTSL 3 BASIC4.88□□□□□ -1.63
H3BM21 AC107918.3-201ENST00000533272 382 ntBASIC4.88□□□□□ -1.63
H3BM21 AC133485.4-201ENST00000561835 220 ntBASIC4.88□□□□□ -1.63
H3BM21 AC138907.4-201ENST00000570107 226 ntBASIC4.88□□□□□ -1.63
H3BM21 AL450472.3-201ENST00000615578 367 ntBASIC4.88□□□□□ -1.63
H3BM21 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC4.88□□□□□ -1.63
H3BM21 BX005214.3-202ENST00000619809 325 ntBASIC4.88□□□□□ -1.63
H3BM21 AL121890.5-201ENST00000620848 304 ntBASIC4.88□□□□□ -1.63
H3BM21 CCDC25-212ENST00000640944 261 ntTSL 5 BASIC4.88□□□□□ -1.63
H3BM21 HMBOX1-202ENST00000355231 1694 ntTSL 5 BASIC4.88□□□□□ -1.63
H3BM21 SDCBP-213ENST00000630925 2076 ntTSL 5 BASIC4.88□□□□□ -1.63
H3BM21 SAMD12-202ENST00000409003 8866 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
H3BM21 GOLPH3L-201ENST00000271732 2999 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
H3BM21 CP-201ENST00000264613 4676 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
H3BM21 STK31-205ENST00000433467 3085 ntTSL 2 BASIC4.88□□□□□ -1.63
H3BM21 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC4.88□□□□□ -1.63
H3BM21 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC4.87□□□□□ -1.63
H3BM21 IPO5-201ENST00000261574 6003 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
H3BM21 WDR35-202ENST00000345530 6960 ntAPPRIS ALT1 TSL 1 (best) BASIC4.87□□□□□ -1.63
H3BM21 MTUS1-203ENST00000381861 3996 ntAPPRIS P4 TSL 2 BASIC4.87□□□□□ -1.63
H3BM21 ZNF780B-202ENST00000434248 8665 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
H3BM21 ZNF780B-207ENST00000617676 8664 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
H3BM21 OR8H2-201ENST00000313503 3088 ntAPPRIS P2 BASIC4.87□□□□□ -1.63
H3BM21 CLSPN-206ENST00000520551 4010 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
H3BM21 SNORA73.1-201ENST00000363107 205 ntBASIC4.87□□□□□ -1.63
H3BM21 RNU6-19P-201ENST00000384718 107 ntBASIC4.87□□□□□ -1.63
H3BM21 SNORD72-201ENST00000390994 80 ntBASIC4.87□□□□□ -1.63
H3BM21 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
H3BM21 RNU2-21P-201ENST00000410368 188 ntBASIC4.87□□□□□ -1.63
H3BM21 HSPE1P13-201ENST00000451143 297 ntBASIC4.87□□□□□ -1.63
H3BM21 RPS29P33-201ENST00000456717 146 ntBASIC4.87□□□□□ -1.63
H3BM21 BTF3L4P4-201ENST00000506381 449 ntBASIC4.87□□□□□ -1.63
H3BM21 ENPP7P9-201ENST00000514456 627 ntBASIC4.87□□□□□ -1.63
H3BM21 RNU6-1061P-201ENST00000516530 99 ntBASIC4.87□□□□□ -1.63
H3BM21 RNU6-1007P-201ENST00000516586 107 ntBASIC4.87□□□□□ -1.63
H3BM21 RNU6-840P-201ENST00000517275 65 ntBASIC4.87□□□□□ -1.63
H3BM21 MIR4782-201ENST00000577987 79 ntBASIC4.87□□□□□ -1.63
H3BM21 uc_338.18-201ENST00000615451 175 ntBASIC4.87□□□□□ -1.63
H3BM21 PCBP1-AS1-307ENST00000627050 912 ntTSL 5 BASIC4.87□□□□□ -1.63
H3BM21 AL034408.1-202ENST00000636088 415 ntBASIC4.87□□□□□ -1.63
H3BM21 FAM46D-202ENST00000538312 3106 ntAPPRIS P1 TSL 2 BASIC4.87□□□□□ -1.63
H3BM21 OR4E1-202ENST00000641792 3742 ntAPPRIS P5 BASIC4.87□□□□□ -1.63
H3BM21 KLHL13-203ENST00000371878 3234 ntTSL 2 BASIC4.87□□□□□ -1.63
H3BM21 AC009541.1-201ENST00000438279 2662 ntBASIC4.87□□□□□ -1.63
H3BM21 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
H3BM21 SLC4A10-203ENST00000415876 5578 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
H3BM21 PPP1R9A-207ENST00000433881 9928 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
H3BM21 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC4.86□□□□□ -1.63
H3BM21 TMEM68-202ENST00000434581 2549 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
H3BM21 CD84-206ENST00000368054 8181 ntAPPRIS P3 TSL 1 (best) BASIC4.86□□□□□ -1.63
H3BM21 PIK3C3-217ENST00000639914 2722 ntTSL 5 BASIC4.86□□□□□ -1.63
H3BM21 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC4.86□□□□□ -1.63
H3BM21 RBMS3-205ENST00000434693 8540 ntTSL 5 BASIC4.86□□□□□ -1.63
H3BM21 DNAJC9-AS1-204ENST00000440197 2865 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
H3BM21 SLC10A7-203ENST00000432059 3747 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
H3BM21 LINC00989-201ENST00000508174 2080 ntTSL 3 BASIC4.86□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 91.8 ms