Protein–RNA interactions for Protein: A6NM62

LRRC53, Leucine-rich repeat-containing protein 53, humanhuman

Predictions only

Length 1,247 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC53A6NM62 AP003465.2-201ENST00000602571 373 ntBASIC3.05□□□□□ -1.92
LRRC53A6NM62 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC3.05□□□□□ -1.92
LRRC53A6NM62 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC3.05□□□□□ -1.92
LRRC53A6NM62 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC3.05□□□□□ -1.92
LRRC53A6NM62 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC3.05□□□□□ -1.92
LRRC53A6NM62 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC3.05□□□□□ -1.92
LRRC53A6NM62 ANKRD36BP1-202ENST00000604892 1417 ntBASIC3.04□□□□□ -1.92
LRRC53A6NM62 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC3.04□□□□□ -1.92
LRRC53A6NM62 MTND4P14-201ENST00000435799 1354 ntBASIC3.04□□□□□ -1.92
LRRC53A6NM62 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
LRRC53A6NM62 Y_RNA.38-201ENST00000362617 102 ntBASIC3.04□□□□□ -1.92
LRRC53A6NM62 RNY4P14-201ENST00000363656 96 ntBASIC3.04□□□□□ -1.92
LRRC53A6NM62 SNORA38.1-201ENST00000364172 131 ntBASIC3.04□□□□□ -1.92
LRRC53A6NM62 Z98749.2-208ENST00000381646 500 ntBASIC3.04□□□□□ -1.92
LRRC53A6NM62 RPL5P18-201ENST00000406671 891 ntBASIC3.04□□□□□ -1.92
LRRC53A6NM62 RNU6-908P-201ENST00000410160 94 ntBASIC3.04□□□□□ -1.92
LRRC53A6NM62 RNU6-1068P-201ENST00000410958 103 ntBASIC3.04□□□□□ -1.92
LRRC53A6NM62 EIF1P1-201ENST00000421436 341 ntBASIC3.04□□□□□ -1.92
LRRC53A6NM62 RBM6-203ENST00000421682 684 ntTSL 2 BASIC3.04□□□□□ -1.92
LRRC53A6NM62 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC3.04□□□□□ -1.92
LRRC53A6NM62 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC3.04□□□□□ -1.92
LRRC53A6NM62 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC3.04□□□□□ -1.92
LRRC53A6NM62 AC003071.1-201ENST00000451219 789 ntBASIC3.04□□□□□ -1.92
LRRC53A6NM62 NIPA2P5-201ENST00000452282 464 ntBASIC3.04□□□□□ -1.92
LRRC53A6NM62 BX510359.1-201ENST00000456973 237 ntBASIC3.04□□□□□ -1.92
LRRC53A6NM62 SCARNA18-201ENST00000459004 134 ntBASIC3.04□□□□□ -1.92
LRRC53A6NM62 RPL23AP11-201ENST00000475260 469 ntBASIC3.04□□□□□ -1.92
LRRC53A6NM62 AC103975.1-201ENST00000482506 483 ntBASIC3.04□□□□□ -1.92
LRRC53A6NM62 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
LRRC53A6NM62 MTND1P5-201ENST00000517906 940 ntBASIC3.04□□□□□ -1.92
LRRC53A6NM62 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC3.04□□□□□ -1.92
LRRC53A6NM62 AL137161.1-201ENST00000532231 390 ntBASIC3.04□□□□□ -1.92
LRRC53A6NM62 HPRT1P3-201ENST00000539521 576 ntBASIC3.04□□□□□ -1.92
LRRC53A6NM62 AC107016.2-201ENST00000547968 190 ntBASIC3.04□□□□□ -1.92
LRRC53A6NM62 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC3.04□□□□□ -1.92
LRRC53A6NM62 CYCSP39-201ENST00000565821 309 ntBASIC3.04□□□□□ -1.92
LRRC53A6NM62 MIR5692A1-201ENST00000580523 69 ntBASIC3.04□□□□□ -1.92
LRRC53A6NM62 AL162413.1-201ENST00000603198 110 ntBASIC3.04□□□□□ -1.92
LRRC53A6NM62 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC3.04□□□□□ -1.92
LRRC53A6NM62 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
LRRC53A6NM62 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
LRRC53A6NM62 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC3.04□□□□□ -1.92
LRRC53A6NM62 IL33-203ENST00000456383 2501 ntTSL 5 BASIC3.03□□□□□ -1.92
LRRC53A6NM62 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC3.03□□□□□ -1.92
LRRC53A6NM62 RNU6-45P-201ENST00000384471 107 ntBASIC3.03□□□□□ -1.92
LRRC53A6NM62 SNORD37.1-201ENST00000390968 65 ntBASIC3.03□□□□□ -1.92
LRRC53A6NM62 SNORD70.1-201ENST00000391007 85 ntBASIC3.03□□□□□ -1.92
LRRC53A6NM62 SNORA48.5-201ENST00000391143 135 ntBASIC3.03□□□□□ -1.92
LRRC53A6NM62 AL356057.2-201ENST00000403318 432 ntBASIC3.03□□□□□ -1.92
LRRC53A6NM62 CIR1P3-201ENST00000405137 479 ntBASIC3.03□□□□□ -1.92
LRRC53A6NM62 AL606923.1-201ENST00000406616 190 ntBASIC3.03□□□□□ -1.92
LRRC53A6NM62 AL592148.1-201ENST00000413568 445 ntBASIC3.03□□□□□ -1.92
LRRC53A6NM62 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC3.03□□□□□ -1.92
LRRC53A6NM62 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC3.03□□□□□ -1.92
LRRC53A6NM62 HMGB1P9-201ENST00000429856 646 ntBASIC3.03□□□□□ -1.92
LRRC53A6NM62 AL513043.1-201ENST00000439124 535 ntBASIC3.03□□□□□ -1.92
LRRC53A6NM62 AL078601.1-201ENST00000444542 271 ntBASIC3.03□□□□□ -1.92
LRRC53A6NM62 RPS15AP27-201ENST00000449183 343 ntBASIC3.03□□□□□ -1.92
LRRC53A6NM62 AL160162.1-201ENST00000456715 442 ntTSL 3 BASIC3.03□□□□□ -1.92
LRRC53A6NM62 RN7SL297P-201ENST00000483161 293 ntBASIC3.03□□□□□ -1.92
LRRC53A6NM62 MTND3P25-201ENST00000509243 135 ntBASIC3.03□□□□□ -1.92
LRRC53A6NM62 AC104136.1-201ENST00000512969 394 ntBASIC3.03□□□□□ -1.92
LRRC53A6NM62 AC091826.1-201ENST00000514065 313 ntBASIC3.03□□□□□ -1.92
LRRC53A6NM62 SCGB1D5P-201ENST00000515134 247 ntBASIC3.03□□□□□ -1.92
LRRC53A6NM62 SNORA9.3-201ENST00000516383 129 ntBASIC3.03□□□□□ -1.92
LRRC53A6NM62 MTND4LP26-201ENST00000518144 282 ntBASIC3.03□□□□□ -1.92
LRRC53A6NM62 SUB1P1-201ENST00000524415 382 ntBASIC3.03□□□□□ -1.92
LRRC53A6NM62 MTND1P35-201ENST00000526739 508 ntBASIC3.03□□□□□ -1.92
LRRC53A6NM62 AC109635.3-201ENST00000529536 185 ntBASIC3.03□□□□□ -1.92
LRRC53A6NM62 BNIP3P6-201ENST00000549284 499 ntBASIC3.03□□□□□ -1.92
LRRC53A6NM62 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC3.03□□□□□ -1.92
LRRC53A6NM62 MIR4782-201ENST00000577987 79 ntBASIC3.03□□□□□ -1.92
LRRC53A6NM62 MIR4424-201ENST00000585257 86 ntBASIC3.03□□□□□ -1.92
LRRC53A6NM62 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC3.03□□□□□ -1.92
LRRC53A6NM62 AC078899.3-201ENST00000599065 212 ntBASIC3.03□□□□□ -1.92
LRRC53A6NM62 AC092794.1-201ENST00000612734 582 ntBASIC3.03□□□□□ -1.92
LRRC53A6NM62 AC004852.3-201ENST00000614131 326 ntBASIC3.03□□□□□ -1.92
LRRC53A6NM62 AC026585.1-201ENST00000619582 524 ntBASIC3.03□□□□□ -1.92
LRRC53A6NM62 MIR6075-201ENST00000620782 95 ntBASIC3.03□□□□□ -1.92
LRRC53A6NM62 MIR3651-201ENST00000630427 90 ntBASIC3.03□□□□□ -1.92
LRRC53A6NM62 HDX-206ENST00000506585 6158 ntTSL 2 BASIC3.03□□□□□ -1.92
LRRC53A6NM62 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
LRRC53A6NM62 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC3.03□□□□□ -1.92
LRRC53A6NM62 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC3.03□□□□□ -1.93
LRRC53A6NM62 AC096644.4-201ENST00000563417 2912 ntBASIC3.03□□□□□ -1.93
LRRC53A6NM62 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC3.02□□□□□ -1.93
LRRC53A6NM62 AC110491.1-201ENST00000562191 2010 ntBASIC3.02□□□□□ -1.93
LRRC53A6NM62 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC3.02□□□□□ -1.93
LRRC53A6NM62 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
LRRC53A6NM62 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
LRRC53A6NM62 MIR412-201ENST00000362142 91 ntBASIC3.02□□□□□ -1.93
LRRC53A6NM62 MIR34B-201ENST00000385076 84 ntBASIC3.02□□□□□ -1.93
LRRC53A6NM62 SNORA16.2-201ENST00000390991 127 ntBASIC3.02□□□□□ -1.93
LRRC53A6NM62 Y_RNA.623-201ENST00000411128 95 ntBASIC3.02□□□□□ -1.93
LRRC53A6NM62 RPS15AP5-201ENST00000436276 388 ntBASIC3.02□□□□□ -1.93
LRRC53A6NM62 SEPT14P3-201ENST00000439401 183 ntBASIC3.02□□□□□ -1.93
LRRC53A6NM62 AL732372.2-207ENST00000445840 183 ntBASIC3.02□□□□□ -1.93
LRRC53A6NM62 MRPL50P4-201ENST00000446432 475 ntBASIC3.02□□□□□ -1.93
LRRC53A6NM62 SEPT14P2-201ENST00000453405 183 ntBASIC3.02□□□□□ -1.93
LRRC53A6NM62 AC092989.1-201ENST00000481235 277 ntBASIC3.02□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 97.7 ms