Protein–RNA interactions for Protein: A0PJX4

SHISA3, Protein shisa-3 homolog, humanhuman

Predictions only

Length 238 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3A0PJX4 RNU1-103P-201ENST00000516502 125 ntBASIC3.93□□□□□ -1.78
SHISA3A0PJX4 CBX3P4-201ENST00000538909 354 ntBASIC3.93□□□□□ -1.78
SHISA3A0PJX4 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC3.93□□□□□ -1.78
SHISA3A0PJX4 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC3.93□□□□□ -1.78
SHISA3A0PJX4 SNORD113-5-201ENST00000607261 78 ntBASIC3.93□□□□□ -1.78
SHISA3A0PJX4 AC011476.5-201ENST00000615594 130 ntBASIC3.93□□□□□ -1.78
SHISA3A0PJX4 AC024581.2-201ENST00000619986 252 ntBASIC3.93□□□□□ -1.78
SHISA3A0PJX4 LGALS13-204ENST00000621475 494 ntAPPRIS ALT2 TSL 5 BASIC3.93□□□□□ -1.78
SHISA3A0PJX4 AC007546.2-201ENST00000623996 360 ntBASIC3.93□□□□□ -1.78
SHISA3A0PJX4 DLX6-AS1-201ENST00000430027 15364 ntTSL 2 BASIC3.93□□□□□ -1.78
SHISA3A0PJX4 SYTL2-217ENST00000528231 3536 ntAPPRIS ALT1 TSL 1 (best) BASIC3.93□□□□□ -1.78
SHISA3A0PJX4 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC3.93□□□□□ -1.78
SHISA3A0PJX4 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC3.93□□□□□ -1.78
SHISA3A0PJX4 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
SHISA3A0PJX4 OR5H14-202ENST00000641380 7323 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
SHISA3A0PJX4 RNU6-778P-201ENST00000363269 103 ntBASIC3.92□□□□□ -1.78
SHISA3A0PJX4 RNU6-137P-201ENST00000363680 108 ntBASIC3.92□□□□□ -1.78
SHISA3A0PJX4 RNU6-326P-201ENST00000365480 107 ntBASIC3.92□□□□□ -1.78
SHISA3A0PJX4 RNU6-142P-201ENST00000384019 107 ntBASIC3.92□□□□□ -1.78
SHISA3A0PJX4 Y_RNA.504-201ENST00000384481 104 ntBASIC3.92□□□□□ -1.78
SHISA3A0PJX4 RNU6-102P-201ENST00000384485 104 ntBASIC3.92□□□□□ -1.78
SHISA3A0PJX4 MIR32-201ENST00000384965 70 ntBASIC3.92□□□□□ -1.78
SHISA3A0PJX4 MIR607-201ENST00000385241 96 ntBASIC3.92□□□□□ -1.78
SHISA3A0PJX4 MIR325-201ENST00000385260 98 ntBASIC3.92□□□□□ -1.78
SHISA3A0PJX4 RNA5SP213-201ENST00000391031 106 ntBASIC3.92□□□□□ -1.78
SHISA3A0PJX4 PCNPP3-201ENST00000393579 471 ntBASIC3.92□□□□□ -1.78
SHISA3A0PJX4 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
SHISA3A0PJX4 RPS4XP3-201ENST00000398541 413 ntBASIC3.92□□□□□ -1.78
SHISA3A0PJX4 RNA5SP44-201ENST00000410446 133 ntBASIC3.92□□□□□ -1.78
SHISA3A0PJX4 SNORA74C-2-201ENST00000411179 201 ntBASIC3.92□□□□□ -1.78
SHISA3A0PJX4 RPS20P14-201ENST00000412545 360 ntBASIC3.92□□□□□ -1.78
SHISA3A0PJX4 HMGN2P30-201ENST00000423237 256 ntBASIC3.92□□□□□ -1.78
SHISA3A0PJX4 RPL23AP95-201ENST00000426806 265 ntBASIC3.92□□□□□ -1.78
SHISA3A0PJX4 NDUFB4P6-201ENST00000436819 366 ntBASIC3.92□□□□□ -1.78
SHISA3A0PJX4 AC098831.1-201ENST00000440661 216 ntBASIC3.92□□□□□ -1.78
SHISA3A0PJX4 AL353152.1-201ENST00000455973 470 ntTSL 5 BASIC3.92□□□□□ -1.78
SHISA3A0PJX4 SCARNA10-201ENST00000459255 330 ntBASIC3.92□□□□□ -1.78
SHISA3A0PJX4 RNU7-120P-201ENST00000459334 63 ntBASIC3.92□□□□□ -1.78
SHISA3A0PJX4 AC087477.1-201ENST00000465747 340 ntBASIC3.92□□□□□ -1.78
SHISA3A0PJX4 RPL23AP14-201ENST00000468281 468 ntBASIC3.92□□□□□ -1.78
SHISA3A0PJX4 COX6CP14-201ENST00000469580 174 ntBASIC3.92□□□□□ -1.78
SHISA3A0PJX4 RPS23P1-201ENST00000491662 432 ntBASIC3.92□□□□□ -1.78
SHISA3A0PJX4 AF186996.7-201ENST00000492781 209 ntBASIC3.92□□□□□ -1.78
SHISA3A0PJX4 AC025445.1-201ENST00000502728 300 ntBASIC3.92□□□□□ -1.78
SHISA3A0PJX4 LINC02508-201ENST00000504165 426 ntTSL 3 BASIC3.92□□□□□ -1.78
SHISA3A0PJX4 AC008957.1-201ENST00000510740 478 ntTSL 3 BASIC3.92□□□□□ -1.78
SHISA3A0PJX4 Vault.1-201ENST00000516474 102 ntBASIC3.92□□□□□ -1.78
SHISA3A0PJX4 SNORA25.14-201ENST00000516481 132 ntBASIC3.92□□□□□ -1.78
SHISA3A0PJX4 RNU6-1212P-201ENST00000517023 104 ntBASIC3.92□□□□□ -1.78
SHISA3A0PJX4 MDM2-232ENST00000544561 213 ntTSL 5 BASIC3.92□□□□□ -1.78
SHISA3A0PJX4 H3F3AP1-201ENST00000559984 334 ntBASIC3.92□□□□□ -1.78
SHISA3A0PJX4 MIR4646-201ENST00000580775 63 ntBASIC3.92□□□□□ -1.78
SHISA3A0PJX4 AL391358.1-201ENST00000605342 190 ntBASIC3.92□□□□□ -1.78
SHISA3A0PJX4 AC037487.3-201ENST00000606668 112 ntBASIC3.92□□□□□ -1.78
SHISA3A0PJX4 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC3.92□□□□□ -1.78
SHISA3A0PJX4 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC3.92□□□□□ -1.78
SHISA3A0PJX4 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
SHISA3A0PJX4 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC3.92□□□□□ -1.78
SHISA3A0PJX4 MAPK10-286ENST00000641208 8747 ntBASIC3.92□□□□□ -1.78
SHISA3A0PJX4 SMG1P1-206ENST00000431681 2913 ntTSL 2 BASIC3.92□□□□□ -1.78
SHISA3A0PJX4 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
SHISA3A0PJX4 SCN2A-201ENST00000283256 8660 ntAPPRIS P5 TSL 1 (best) BASIC3.92□□□□□ -1.78
SHISA3A0PJX4 GABRG2-214ENST00000639111 11735 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
SHISA3A0PJX4 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC3.92□□□□□ -1.78
SHISA3A0PJX4 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
SHISA3A0PJX4 ARL15-202ENST00000504924 2486 ntAPPRIS P2 TSL 1 (best) BASIC3.92□□□□□ -1.78
SHISA3A0PJX4 ARL15-207ENST00000620747 2486 ntAPPRIS ALT1 TSL 5 BASIC3.92□□□□□ -1.78
SHISA3A0PJX4 PTPN13-209ENST00000511467 8076 ntAPPRIS P4 TSL 2 BASIC3.91□□□□□ -1.78
SHISA3A0PJX4 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
SHISA3A0PJX4 CYP19A1-201ENST00000396402 4417 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
SHISA3A0PJX4 DTNA-208ENST00000554864 1680 ntAPPRIS ALT2 TSL 1 (best) BASIC3.91□□□□□ -1.78
SHISA3A0PJX4 MAPK10-263ENST00000641052 4307 ntBASIC3.91□□□□□ -1.78
SHISA3A0PJX4 ANKRD30A-202ENST00000374660 4762 ntAPPRIS ALT2 TSL 5 BASIC3.91□□□□□ -1.78
SHISA3A0PJX4 MIR411-201ENST00000362239 96 ntBASIC3.91□□□□□ -1.78
SHISA3A0PJX4 Y_RNA.44-201ENST00000362676 108 ntBASIC3.91□□□□□ -1.78
SHISA3A0PJX4 RNU6-545P-201ENST00000362681 104 ntBASIC3.91□□□□□ -1.78
SHISA3A0PJX4 RNU6-879P-201ENST00000364328 108 ntBASIC3.91□□□□□ -1.78
SHISA3A0PJX4 C1orf54-201ENST00000369098 418 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
SHISA3A0PJX4 RNU6-318P-201ENST00000384283 103 ntBASIC3.91□□□□□ -1.78
SHISA3A0PJX4 RNU1-106P-201ENST00000384382 164 ntBASIC3.91□□□□□ -1.78
SHISA3A0PJX4 UBA52P6-201ENST00000399822 382 ntBASIC3.91□□□□□ -1.78
SHISA3A0PJX4 RNU6ATAC7P-201ENST00000408111 127 ntBASIC3.91□□□□□ -1.78
SHISA3A0PJX4 RNU5A-5P-201ENST00000411054 116 ntBASIC3.91□□□□□ -1.78
SHISA3A0PJX4 AC140479.3-201ENST00000418944 1126 ntBASIC3.91□□□□□ -1.78
SHISA3A0PJX4 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC3.91□□□□□ -1.78
SHISA3A0PJX4 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
SHISA3A0PJX4 AC068287.1-201ENST00000430283 295 ntBASIC3.91□□□□□ -1.78
SHISA3A0PJX4 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC3.91□□□□□ -1.78
SHISA3A0PJX4 AC005002.2-201ENST00000438228 269 ntBASIC3.91□□□□□ -1.78
SHISA3A0PJX4 AL772161.1-201ENST00000439130 476 ntBASIC3.91□□□□□ -1.78
SHISA3A0PJX4 AL356535.1-201ENST00000440335 398 ntBASIC3.91□□□□□ -1.78
SHISA3A0PJX4 AP000844.1-201ENST00000446631 577 ntTSL 3 BASIC3.91□□□□□ -1.78
SHISA3A0PJX4 AL031659.1-201ENST00000447075 539 ntBASIC3.91□□□□□ -1.78
SHISA3A0PJX4 AP000870.1-201ENST00000472927 406 ntBASIC3.91□□□□□ -1.78
SHISA3A0PJX4 RN7SL826P-201ENST00000479724 288 ntBASIC3.91□□□□□ -1.78
SHISA3A0PJX4 AC083982.1-201ENST00000485679 344 ntBASIC3.91□□□□□ -1.78
SHISA3A0PJX4 AC093840.1-201ENST00000511599 336 ntBASIC3.91□□□□□ -1.78
SHISA3A0PJX4 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC3.91□□□□□ -1.78
SHISA3A0PJX4 AC091163.1-201ENST00000524012 605 ntTSL 4 BASIC3.91□□□□□ -1.78
SHISA3A0PJX4 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC3.91□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 100.7 ms