Protein–RNA interactions for Protein: Q9Y5I4

PCDHAC2, Protocadherin alpha-C2, humanhuman

Predictions only

Length 1,007 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHAC2Q9Y5I4 RPL26P6-201ENST00000440913 438 ntBASIC3.21□□□□□ -1.9
PCDHAC2Q9Y5I4 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC3.21□□□□□ -1.9
PCDHAC2Q9Y5I4 AC010095.1-201ENST00000443543 144 ntBASIC3.21□□□□□ -1.9
PCDHAC2Q9Y5I4 SNRPGP6-201ENST00000451124 220 ntBASIC3.21□□□□□ -1.9
PCDHAC2Q9Y5I4 UQCRHP3-201ENST00000451503 251 ntBASIC3.21□□□□□ -1.9
PCDHAC2Q9Y5I4 RNU6-261P-201ENST00000459506 102 ntBASIC3.21□□□□□ -1.9
PCDHAC2Q9Y5I4 RN7SL75P-201ENST00000461926 281 ntBASIC3.21□□□□□ -1.9
PCDHAC2Q9Y5I4 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC3.21□□□□□ -1.9
PCDHAC2Q9Y5I4 SRIP1-201ENST00000489235 288 ntBASIC3.21□□□□□ -1.9
PCDHAC2Q9Y5I4 HMGN1P12-201ENST00000499125 195 ntBASIC3.21□□□□□ -1.9
PCDHAC2Q9Y5I4 YWHAEP4-201ENST00000505390 198 ntBASIC3.21□□□□□ -1.9
PCDHAC2Q9Y5I4 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC3.21□□□□□ -1.9
PCDHAC2Q9Y5I4 RNU6-875P-201ENST00000516488 106 ntBASIC3.21□□□□□ -1.9
PCDHAC2Q9Y5I4 RNU7-51P-201ENST00000516560 62 ntBASIC3.21□□□□□ -1.9
PCDHAC2Q9Y5I4 RNU6-410P-201ENST00000517006 107 ntBASIC3.21□□□□□ -1.9
PCDHAC2Q9Y5I4 HMGB1P41-201ENST00000520234 440 ntBASIC3.21□□□□□ -1.9
PCDHAC2Q9Y5I4 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC3.21□□□□□ -1.9
PCDHAC2Q9Y5I4 ERHP1-201ENST00000523006 310 ntBASIC3.21□□□□□ -1.9
PCDHAC2Q9Y5I4 AF235103.2-201ENST00000525753 346 ntBASIC3.21□□□□□ -1.9
PCDHAC2Q9Y5I4 AP005435.4-201ENST00000529514 284 ntBASIC3.21□□□□□ -1.9
PCDHAC2Q9Y5I4 RAB11AP2-201ENST00000545905 639 ntBASIC3.21□□□□□ -1.9
PCDHAC2Q9Y5I4 GLYCAM1-201ENST00000546596 285 ntBASIC3.21□□□□□ -1.9
PCDHAC2Q9Y5I4 AC093012.1-202ENST00000549403 582 ntBASIC3.21□□□□□ -1.9
PCDHAC2Q9Y5I4 TRAV37-201ENST00000553906 342 ntBASIC3.21□□□□□ -1.9
PCDHAC2Q9Y5I4 MED28P6-201ENST00000558776 231 ntBASIC3.21□□□□□ -1.9
PCDHAC2Q9Y5I4 AC024619.4-201ENST00000580924 316 ntBASIC3.21□□□□□ -1.9
PCDHAC2Q9Y5I4 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC3.21□□□□□ -1.9
PCDHAC2Q9Y5I4 AC025253.1-201ENST00000613623 543 ntBASIC3.21□□□□□ -1.9
PCDHAC2Q9Y5I4 SNHG22-203ENST00000617833 660 ntBASIC3.21□□□□□ -1.9
PCDHAC2Q9Y5I4 FRG1KP-201ENST00000623592 341 ntBASIC3.21□□□□□ -1.9
PCDHAC2Q9Y5I4 AC092608.2-201ENST00000624427 218 ntBASIC3.21□□□□□ -1.9
PCDHAC2Q9Y5I4 AL359697.1-201ENST00000624879 587 ntBASIC3.21□□□□□ -1.9
PCDHAC2Q9Y5I4 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC3.21□□□□□ -1.9
PCDHAC2Q9Y5I4 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC3.21□□□□□ -1.9
PCDHAC2Q9Y5I4 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC3.21□□□□□ -1.9
PCDHAC2Q9Y5I4 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
PCDHAC2Q9Y5I4 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC3.21□□□□□ -1.9
PCDHAC2Q9Y5I4 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
PCDHAC2Q9Y5I4 CKAP2P1-201ENST00000555477 2049 ntBASIC3.2□□□□□ -1.9
PCDHAC2Q9Y5I4 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
PCDHAC2Q9Y5I4 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC3.2□□□□□ -1.9
PCDHAC2Q9Y5I4 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
PCDHAC2Q9Y5I4 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
PCDHAC2Q9Y5I4 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC3.2□□□□□ -1.9
PCDHAC2Q9Y5I4 EFTUD1P2-201ENST00000514817 1603 ntBASIC3.2□□□□□ -1.9
PCDHAC2Q9Y5I4 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
PCDHAC2Q9Y5I4 Y_RNA.61-201ENST00000362835 102 ntBASIC3.2□□□□□ -1.9
PCDHAC2Q9Y5I4 Y_RNA.573-201ENST00000384763 105 ntBASIC3.2□□□□□ -1.9
PCDHAC2Q9Y5I4 AL136372.1-201ENST00000403060 228 ntBASIC3.2□□□□□ -1.9
PCDHAC2Q9Y5I4 RNU6-1148P-201ENST00000410992 104 ntBASIC3.2□□□□□ -1.9
PCDHAC2Q9Y5I4 RN7SKP58-201ENST00000411010 305 ntBASIC3.2□□□□□ -1.9
PCDHAC2Q9Y5I4 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC3.2□□□□□ -1.9
PCDHAC2Q9Y5I4 ZNF90P2-204ENST00000419323 1075 ntBASIC3.2□□□□□ -1.9
PCDHAC2Q9Y5I4 SNRPEP10-201ENST00000420249 274 ntBASIC3.2□□□□□ -1.9
PCDHAC2Q9Y5I4 AC093106.2-201ENST00000428212 385 ntBASIC3.2□□□□□ -1.9
PCDHAC2Q9Y5I4 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC3.2□□□□□ -1.9
PCDHAC2Q9Y5I4 RPL36AP53-201ENST00000432891 316 ntBASIC3.2□□□□□ -1.9
PCDHAC2Q9Y5I4 HMGB3P12-201ENST00000438745 556 ntBASIC3.2□□□□□ -1.9
PCDHAC2Q9Y5I4 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC3.2□□□□□ -1.9
PCDHAC2Q9Y5I4 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC3.2□□□□□ -1.9
PCDHAC2Q9Y5I4 AC008628.2-201ENST00000502605 298 ntBASIC3.2□□□□□ -1.9
PCDHAC2Q9Y5I4 ANXA2P1-201ENST00000505539 926 ntBASIC3.2□□□□□ -1.9
PCDHAC2Q9Y5I4 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC3.2□□□□□ -1.9
PCDHAC2Q9Y5I4 AC018710.1-201ENST00000506509 158 ntBASIC3.2□□□□□ -1.9
PCDHAC2Q9Y5I4 MTND4LP22-201ENST00000508209 276 ntBASIC3.2□□□□□ -1.9
PCDHAC2Q9Y5I4 RNA5SP401-201ENST00000515920 127 ntBASIC3.2□□□□□ -1.9
PCDHAC2Q9Y5I4 SNORA31.8-201ENST00000516327 108 ntBASIC3.2□□□□□ -1.9
PCDHAC2Q9Y5I4 SNORA31.22-201ENST00000517204 135 ntBASIC3.2□□□□□ -1.9
PCDHAC2Q9Y5I4 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC3.2□□□□□ -1.9
PCDHAC2Q9Y5I4 SUB1P1-201ENST00000524415 382 ntBASIC3.2□□□□□ -1.9
PCDHAC2Q9Y5I4 AP003122.3-201ENST00000526316 255 ntBASIC3.2□□□□□ -1.9
PCDHAC2Q9Y5I4 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC3.2□□□□□ -1.9
PCDHAC2Q9Y5I4 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC3.2□□□□□ -1.9
PCDHAC2Q9Y5I4 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC3.2□□□□□ -1.9
PCDHAC2Q9Y5I4 AL138976.2-201ENST00000563989 694 ntBASIC3.2□□□□□ -1.9
PCDHAC2Q9Y5I4 AC005046.1-201ENST00000608515 625 ntBASIC3.2□□□□□ -1.9
PCDHAC2Q9Y5I4 AC107294.3-201ENST00000609211 526 ntBASIC3.2□□□□□ -1.9
PCDHAC2Q9Y5I4 AC104260.1-201ENST00000616660 539 ntBASIC3.2□□□□□ -1.9
PCDHAC2Q9Y5I4 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC3.2□□□□□ -1.9
PCDHAC2Q9Y5I4 AC006504.8-201ENST00000621046 635 ntBASIC3.2□□□□□ -1.9
PCDHAC2Q9Y5I4 AC010338.1-201ENST00000621823 717 ntBASIC3.2□□□□□ -1.9
PCDHAC2Q9Y5I4 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC3.2□□□□□ -1.9
PCDHAC2Q9Y5I4 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC3.2□□□□□ -1.9
PCDHAC2Q9Y5I4 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC3.2□□□□□ -1.9
PCDHAC2Q9Y5I4 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC3.19□□□□□ -1.9
PCDHAC2Q9Y5I4 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
PCDHAC2Q9Y5I4 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
PCDHAC2Q9Y5I4 HSPE1P11-201ENST00000339579 310 ntBASIC3.19□□□□□ -1.9
PCDHAC2Q9Y5I4 RNU6-50P-201ENST00000362356 103 ntBASIC3.19□□□□□ -1.9
PCDHAC2Q9Y5I4 Y_RNA.160-201ENST00000363677 92 ntBASIC3.19□□□□□ -1.9
PCDHAC2Q9Y5I4 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
PCDHAC2Q9Y5I4 RNU6-641P-201ENST00000384006 107 ntBASIC3.19□□□□□ -1.9
PCDHAC2Q9Y5I4 RPS4XP7-201ENST00000406274 780 ntBASIC3.19□□□□□ -1.9
PCDHAC2Q9Y5I4 SNORA3.2-201ENST00000408221 125 ntBASIC3.19□□□□□ -1.9
PCDHAC2Q9Y5I4 RNA5SP129-201ENST00000410276 118 ntBASIC3.19□□□□□ -1.9
PCDHAC2Q9Y5I4 RNU2-41P-201ENST00000410991 178 ntBASIC3.19□□□□□ -1.9
PCDHAC2Q9Y5I4 RPL21P111-201ENST00000418453 477 ntBASIC3.19□□□□□ -1.9
PCDHAC2Q9Y5I4 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC3.19□□□□□ -1.9
PCDHAC2Q9Y5I4 USP12PX-201ENST00000432383 1057 ntBASIC3.19□□□□□ -1.9
PCDHAC2Q9Y5I4 RPS29P6-201ENST00000438196 145 ntBASIC3.19□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 100.5 ms