Protein–RNA interactions for Protein: Q9Y5G9

PCDHGA4, Protocadherin gamma-A4, humanhuman

Predictions only

Length 962 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA4Q9Y5G9 IGSF10-201ENST00000282466 11067 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
PCDHGA4Q9Y5G9 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
PCDHGA4Q9Y5G9 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
PCDHGA4Q9Y5G9 TSSK4-203ENST00000428351 576 ntTSL 2 BASIC5.55□□□□□ -1.52
PCDHGA4Q9Y5G9 AL590383.1-201ENST00000428602 75 ntBASIC5.55□□□□□ -1.52
PCDHGA4Q9Y5G9 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC5.55□□□□□ -1.52
PCDHGA4Q9Y5G9 RPS23P6-201ENST00000466136 431 ntBASIC5.55□□□□□ -1.52
PCDHGA4Q9Y5G9 RPS17P15-201ENST00000475609 349 ntBASIC5.55□□□□□ -1.52
PCDHGA4Q9Y5G9 AC093270.2-201ENST00000486157 792 ntBASIC5.55□□□□□ -1.52
PCDHGA4Q9Y5G9 RNA5SP360-201ENST00000516555 118 ntBASIC5.55□□□□□ -1.52
PCDHGA4Q9Y5G9 SNORA43.3-201ENST00000517240 103 ntBASIC5.55□□□□□ -1.52
PCDHGA4Q9Y5G9 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC5.55□□□□□ -1.52
PCDHGA4Q9Y5G9 AL049872.1-201ENST00000556323 322 ntBASIC5.55□□□□□ -1.52
PCDHGA4Q9Y5G9 MIR4260-201ENST00000583107 67 ntBASIC5.55□□□□□ -1.52
PCDHGA4Q9Y5G9 ZNF704-201ENST00000327835 14386 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
PCDHGA4Q9Y5G9 MYO3A-203ENST00000376302 2723 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
PCDHGA4Q9Y5G9 CASC15-206ENST00000606851 1889 ntTSL 2 BASIC5.55□□□□□ -1.52
PCDHGA4Q9Y5G9 ARHGAP21-202ENST00000376410 3526 ntTSL 5 BASIC5.55□□□□□ -1.52
PCDHGA4Q9Y5G9 SYNJ2BP-201ENST00000256366 7015 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
PCDHGA4Q9Y5G9 PTPRB-202ENST00000334414 12316 ntAPPRIS P4 TSL 1 (best) BASIC5.55□□□□□ -1.52
PCDHGA4Q9Y5G9 RYR3-212ENST00000634891 15591 ntAPPRIS P3 TSL 1 (best) BASIC5.55□□□□□ -1.52
PCDHGA4Q9Y5G9 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC5.55□□□□□ -1.52
PCDHGA4Q9Y5G9 CEP97-201ENST00000341893 8361 ntAPPRIS P3 TSL 1 (best) BASIC5.54□□□□□ -1.52
PCDHGA4Q9Y5G9 TRGC1-201ENST00000443402 2730 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
PCDHGA4Q9Y5G9 LRRTM4-203ENST00000409282 2451 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
PCDHGA4Q9Y5G9 DYNC1I2-225ENST00000508530 2494 ntAPPRIS ALT1 TSL 1 (best) BASIC5.54□□□□□ -1.52
PCDHGA4Q9Y5G9 MFSD8-239ENST00000641590 2479 ntBASIC5.54□□□□□ -1.52
PCDHGA4Q9Y5G9 LINC00989-201ENST00000508174 2080 ntTSL 3 BASIC5.54□□□□□ -1.52
PCDHGA4Q9Y5G9 ACSL5-202ENST00000354655 3351 ntAPPRIS P1 TSL 2 BASIC5.54□□□□□ -1.52
PCDHGA4Q9Y5G9 VPS13C-204ENST00000395898 11012 ntAPPRIS ALT2 TSL 1 (best) BASIC5.54□□□□□ -1.52
PCDHGA4Q9Y5G9 ZNF383-201ENST00000352998 6760 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
PCDHGA4Q9Y5G9 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
PCDHGA4Q9Y5G9 SNORA51.5-201ENST00000384126 131 ntBASIC5.54□□□□□ -1.52
PCDHGA4Q9Y5G9 AF015720.1-201ENST00000412240 349 ntTSL 3 BASIC5.54□□□□□ -1.52
PCDHGA4Q9Y5G9 AC004990.1-201ENST00000431722 564 ntTSL 4 BASIC5.54□□□□□ -1.52
PCDHGA4Q9Y5G9 SP2-AS1-204ENST00000585280 405 ntTSL 3 BASIC5.54□□□□□ -1.52
PCDHGA4Q9Y5G9 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC5.54□□□□□ -1.52
PCDHGA4Q9Y5G9 AL513314.2-204ENST00000619187 459 ntTSL 5 BASIC5.54□□□□□ -1.52
PCDHGA4Q9Y5G9 CYLD-212ENST00000568704 3292 ntTSL 5 BASIC5.54□□□□□ -1.52
PCDHGA4Q9Y5G9 KDM3B-209ENST00000542866 3634 ntTSL 2 BASIC5.54□□□□□ -1.52
PCDHGA4Q9Y5G9 OR2T7-202ENST00000641557 3409 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
PCDHGA4Q9Y5G9 TEK-205ENST00000615002 4666 ntTSL 5 BASIC5.54□□□□□ -1.52
PCDHGA4Q9Y5G9 AIG1-208ENST00000494282 3393 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
PCDHGA4Q9Y5G9 ASB14-202ENST00000487349 3179 ntAPPRIS P2 TSL 1 (best) BASIC5.54□□□□□ -1.52
PCDHGA4Q9Y5G9 CLVS1-205ENST00000519846 3622 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
PCDHGA4Q9Y5G9 ZNF615-213ENST00000602063 4094 ntAPPRIS P3 TSL 5 BASIC5.53□□□□□ -1.52
PCDHGA4Q9Y5G9 A1CF-207ENST00000395495 9400 ntTSL 5 BASIC5.53□□□□□ -1.52
PCDHGA4Q9Y5G9 RNMT-202ENST00000383314 6250 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
PCDHGA4Q9Y5G9 PTPRZ1-201ENST00000393386 8175 ntAPPRIS P3 TSL 1 (best) BASIC5.53□□□□□ -1.52
PCDHGA4Q9Y5G9 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC5.53□□□□□ -1.52
PCDHGA4Q9Y5G9 LINC00824-203ENST00000520206 2055 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
PCDHGA4Q9Y5G9 RNA5SP443-201ENST00000363083 132 ntBASIC5.53□□□□□ -1.52
PCDHGA4Q9Y5G9 RN7SKP224-201ENST00000364140 325 ntBASIC5.53□□□□□ -1.52
PCDHGA4Q9Y5G9 LY6G5C-210ENST00000383237 674 ntAPPRIS P2 TSL 1 (best) BASIC5.53□□□□□ -1.52
PCDHGA4Q9Y5G9 MIR153-1-201ENST00000384914 90 ntBASIC5.53□□□□□ -1.52
PCDHGA4Q9Y5G9 SNORA48.5-201ENST00000391143 135 ntBASIC5.53□□□□□ -1.52
PCDHGA4Q9Y5G9 MIR1286-201ENST00000408112 78 ntBASIC5.53□□□□□ -1.52
PCDHGA4Q9Y5G9 RN7SKP216-201ENST00000411050 312 ntBASIC5.53□□□□□ -1.52
PCDHGA4Q9Y5G9 CRIP1P1-201ENST00000427567 185 ntBASIC5.53□□□□□ -1.52
PCDHGA4Q9Y5G9 AC231760.1-201ENST00000498002 260 ntBASIC5.53□□□□□ -1.52
PCDHGA4Q9Y5G9 ENPP7P11-201ENST00000505915 627 ntBASIC5.53□□□□□ -1.52
PCDHGA4Q9Y5G9 GLUD1P3-202ENST00000508551 200 ntBASIC5.53□□□□□ -1.52
PCDHGA4Q9Y5G9 RNU6-615P-201ENST00000516065 106 ntBASIC5.53□□□□□ -1.52
PCDHGA4Q9Y5G9 RNU5F-2P-201ENST00000516066 82 ntBASIC5.53□□□□□ -1.52
PCDHGA4Q9Y5G9 RN7SKP12-201ENST00000516275 143 ntBASIC5.53□□□□□ -1.52
PCDHGA4Q9Y5G9 RNU6-970P-201ENST00000516312 107 ntBASIC5.53□□□□□ -1.52
PCDHGA4Q9Y5G9 AC010551.2-201ENST00000569200 416 ntTSL 3 BASIC5.53□□□□□ -1.52
PCDHGA4Q9Y5G9 AP005059.1-201ENST00000578391 456 ntTSL 2 BASIC5.53□□□□□ -1.52
PCDHGA4Q9Y5G9 AC011471.1-201ENST00000585766 187 ntBASIC5.53□□□□□ -1.52
PCDHGA4Q9Y5G9 AL162431.4-201ENST00000604674 411 ntBASIC5.53□□□□□ -1.52
PCDHGA4Q9Y5G9 ARF4P1-201ENST00000605447 541 ntBASIC5.53□□□□□ -1.52
PCDHGA4Q9Y5G9 MIR7155-201ENST00000615925 56 ntBASIC5.53□□□□□ -1.52
PCDHGA4Q9Y5G9 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC5.53□□□□□ -1.52
PCDHGA4Q9Y5G9 GHR-207ENST00000537449 4419 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
PCDHGA4Q9Y5G9 MAP2-205ENST00000392194 5303 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
PCDHGA4Q9Y5G9 OR2H1-202ENST00000377133 3021 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
PCDHGA4Q9Y5G9 OR2H1-203ENST00000377136 3024 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
PCDHGA4Q9Y5G9 OR10K1-203ENST00000641432 3775 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
PCDHGA4Q9Y5G9 AGO3-203ENST00000373191 19687 ntAPPRIS P1 TSL 2 BASIC5.53□□□□□ -1.52
PCDHGA4Q9Y5G9 RPL34-AS1-202ENST00000507248 3713 ntTSL 2 BASIC5.52□□□□□ -1.53
PCDHGA4Q9Y5G9 TET2-203ENST00000380013 9679 ntAPPRIS P2 TSL 5 BASIC5.52□□□□□ -1.53
PCDHGA4Q9Y5G9 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
PCDHGA4Q9Y5G9 XRN1-201ENST00000264951 10143 ntAPPRIS P3 TSL 1 (best) BASIC5.52□□□□□ -1.53
PCDHGA4Q9Y5G9 ZEB1-208ENST00000542815 3217 ntAPPRIS ALT2 TSL 2 BASIC5.52□□□□□ -1.53
PCDHGA4Q9Y5G9 NUP155-202ENST00000381843 4200 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
PCDHGA4Q9Y5G9 AL158064.2-203ENST00000639897 2003 ntTSL 5 BASIC5.52□□□□□ -1.53
PCDHGA4Q9Y5G9 TESPA1-203ENST00000524622 4188 ntAPPRIS ALT2 TSL 1 (best) BASIC5.52□□□□□ -1.53
PCDHGA4Q9Y5G9 LRP1B-201ENST00000389484 16535 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
PCDHGA4Q9Y5G9 TNFSF4-202ENST00000367718 3429 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
PCDHGA4Q9Y5G9 MIA3-203ENST00000344922 8142 ntAPPRIS P2 TSL 5 BASIC5.52□□□□□ -1.53
PCDHGA4Q9Y5G9 EHBP1-202ENST00000405015 4108 ntAPPRIS ALT2 TSL 2 BASIC5.52□□□□□ -1.53
PCDHGA4Q9Y5G9 Y_RNA.163-201ENST00000363702 113 ntBASIC5.52□□□□□ -1.53
PCDHGA4Q9Y5G9 RNU6-978P-201ENST00000364371 103 ntBASIC5.52□□□□□ -1.53
PCDHGA4Q9Y5G9 UBBP2-201ENST00000376781 231 ntBASIC5.52□□□□□ -1.53
PCDHGA4Q9Y5G9 HIST1H3PS1-201ENST00000404612 417 ntBASIC5.52□□□□□ -1.53
PCDHGA4Q9Y5G9 MIR1302-5-201ENST00000408164 150 ntBASIC5.52□□□□□ -1.53
PCDHGA4Q9Y5G9 AC104462.2-201ENST00000418402 271 ntTSL 3 BASIC5.52□□□□□ -1.53
PCDHGA4Q9Y5G9 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC5.52□□□□□ -1.53
PCDHGA4Q9Y5G9 OR2AO1P-201ENST00000476497 403 ntBASIC5.52□□□□□ -1.53
PCDHGA4Q9Y5G9 RN7SL727P-201ENST00000482164 296 ntBASIC5.52□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 108.8 ms