Protein–RNA interactions for Protein: Q9Y5B0

CTDP1, RNA polymerase II subunit A C-terminal domain phosphatase, humanhuman

Predicted RBP Predictions only

Length 961 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1Q9Y5B0 RNU6-190P-201ENST00000384154 102 ntBASIC4.12□□□□□ -1.75
CTDP1Q9Y5B0 RNU6-393P-201ENST00000384475 107 ntBASIC4.12□□□□□ -1.75
CTDP1Q9Y5B0 MIR490-201ENST00000384865 128 ntBASIC4.12□□□□□ -1.75
CTDP1Q9Y5B0 RNU6-308P-201ENST00000390957 107 ntBASIC4.12□□□□□ -1.75
CTDP1Q9Y5B0 AL360182.1-201ENST00000397433 468 ntBASIC4.12□□□□□ -1.75
CTDP1Q9Y5B0 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC4.12□□□□□ -1.75
CTDP1Q9Y5B0 AL139397.2-201ENST00000404529 772 ntBASIC4.12□□□□□ -1.75
CTDP1Q9Y5B0 AL591034.1-201ENST00000407447 340 ntBASIC4.12□□□□□ -1.75
CTDP1Q9Y5B0 RNU2-43P-201ENST00000410306 190 ntBASIC4.12□□□□□ -1.75
CTDP1Q9Y5B0 SSXP9-201ENST00000417503 292 ntBASIC4.12□□□□□ -1.75
CTDP1Q9Y5B0 AP000907.1-201ENST00000428428 510 ntBASIC4.12□□□□□ -1.75
CTDP1Q9Y5B0 AC097713.2-201ENST00000430199 356 ntBASIC4.12□□□□□ -1.75
CTDP1Q9Y5B0 SNAP23P1-201ENST00000433229 246 ntBASIC4.12□□□□□ -1.75
CTDP1Q9Y5B0 AC090774.1-201ENST00000435925 246 ntBASIC4.12□□□□□ -1.75
CTDP1Q9Y5B0 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC4.12□□□□□ -1.75
CTDP1Q9Y5B0 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC4.12□□□□□ -1.75
CTDP1Q9Y5B0 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC4.12□□□□□ -1.75
CTDP1Q9Y5B0 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC4.12□□□□□ -1.75
CTDP1Q9Y5B0 AC026784.1-201ENST00000507986 352 ntBASIC4.12□□□□□ -1.75
CTDP1Q9Y5B0 Y_RNA.689-201ENST00000516589 107 ntBASIC4.12□□□□□ -1.75
CTDP1Q9Y5B0 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC4.12□□□□□ -1.75
CTDP1Q9Y5B0 RNU6-988P-201ENST00000519081 107 ntBASIC4.12□□□□□ -1.75
CTDP1Q9Y5B0 AP006587.4-201ENST00000526053 529 ntBASIC4.12□□□□□ -1.75
CTDP1Q9Y5B0 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC4.12□□□□□ -1.75
CTDP1Q9Y5B0 AC007458.1-201ENST00000542812 373 ntBASIC4.12□□□□□ -1.75
CTDP1Q9Y5B0 AC126177.3-201ENST00000551839 688 ntBASIC4.12□□□□□ -1.75
CTDP1Q9Y5B0 AC090115.3-201ENST00000553218 849 ntBASIC4.12□□□□□ -1.75
CTDP1Q9Y5B0 AL355102.1-201ENST00000555383 460 ntTSL 5 BASIC4.12□□□□□ -1.75
CTDP1Q9Y5B0 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC4.12□□□□□ -1.75
CTDP1Q9Y5B0 AC174048.1-201ENST00000603389 144 ntBASIC4.12□□□□□ -1.75
CTDP1Q9Y5B0 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC4.12□□□□□ -1.75
CTDP1Q9Y5B0 AL157817.1-201ENST00000614264 790 ntBASIC4.12□□□□□ -1.75
CTDP1Q9Y5B0 AL138726.1-201ENST00000614873 333 ntBASIC4.12□□□□□ -1.75
CTDP1Q9Y5B0 AL359547.2-201ENST00000615810 418 ntBASIC4.12□□□□□ -1.75
CTDP1Q9Y5B0 AC092628.2-201ENST00000622492 339 ntBASIC4.12□□□□□ -1.75
CTDP1Q9Y5B0 MTND5P42-201ENST00000637720 498 ntBASIC4.12□□□□□ -1.75
CTDP1Q9Y5B0 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC4.12□□□□□ -1.75
CTDP1Q9Y5B0 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
CTDP1Q9Y5B0 ZNF519P1-201ENST00000449011 1626 ntBASIC4.12□□□□□ -1.75
CTDP1Q9Y5B0 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
CTDP1Q9Y5B0 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
CTDP1Q9Y5B0 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
CTDP1Q9Y5B0 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC4.12□□□□□ -1.75
CTDP1Q9Y5B0 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC4.11□□□□□ -1.75
CTDP1Q9Y5B0 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
CTDP1Q9Y5B0 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
CTDP1Q9Y5B0 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
CTDP1Q9Y5B0 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
CTDP1Q9Y5B0 Y_RNA.144-201ENST00000363521 113 ntBASIC4.11□□□□□ -1.75
CTDP1Q9Y5B0 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC4.11□□□□□ -1.75
CTDP1Q9Y5B0 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
CTDP1Q9Y5B0 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC4.11□□□□□ -1.75
CTDP1Q9Y5B0 Y_RNA.399-201ENST00000383955 105 ntBASIC4.11□□□□□ -1.75
CTDP1Q9Y5B0 RNU6-434P-201ENST00000384376 107 ntBASIC4.11□□□□□ -1.75
CTDP1Q9Y5B0 SNORA16.2-201ENST00000390991 127 ntBASIC4.11□□□□□ -1.75
CTDP1Q9Y5B0 CISD1P1-201ENST00000393907 327 ntBASIC4.11□□□□□ -1.75
CTDP1Q9Y5B0 HSPE1P8-201ENST00000406997 288 ntBASIC4.11□□□□□ -1.75
CTDP1Q9Y5B0 RNU6-954P-201ENST00000411355 107 ntBASIC4.11□□□□□ -1.75
CTDP1Q9Y5B0 RPLP0P7-201ENST00000416050 667 ntBASIC4.11□□□□□ -1.75
CTDP1Q9Y5B0 AL158156.1-201ENST00000422509 473 ntBASIC4.11□□□□□ -1.75
CTDP1Q9Y5B0 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC4.11□□□□□ -1.75
CTDP1Q9Y5B0 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC4.11□□□□□ -1.75
CTDP1Q9Y5B0 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC4.11□□□□□ -1.75
CTDP1Q9Y5B0 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC4.11□□□□□ -1.75
CTDP1Q9Y5B0 MTCO3P10-201ENST00000455912 772 ntBASIC4.11□□□□□ -1.75
CTDP1Q9Y5B0 ELOCP24-201ENST00000456370 334 ntBASIC4.11□□□□□ -1.75
CTDP1Q9Y5B0 RNU7-167P-201ENST00000459160 62 ntBASIC4.11□□□□□ -1.75
CTDP1Q9Y5B0 RN7SL601P-201ENST00000471221 293 ntBASIC4.11□□□□□ -1.75
CTDP1Q9Y5B0 RPL7P42-201ENST00000481005 679 ntBASIC4.11□□□□□ -1.75
CTDP1Q9Y5B0 SMURF2P1-201ENST00000514992 481 ntBASIC4.11□□□□□ -1.75
CTDP1Q9Y5B0 IL7-206ENST00000520269 456 ntTSL 3 BASIC4.11□□□□□ -1.75
CTDP1Q9Y5B0 AC022634.1-201ENST00000520765 532 ntBASIC4.11□□□□□ -1.75
CTDP1Q9Y5B0 MIR5195-201ENST00000583555 115 ntBASIC4.11□□□□□ -1.75
CTDP1Q9Y5B0 AC104763.2-201ENST00000604179 382 ntBASIC4.11□□□□□ -1.75
CTDP1Q9Y5B0 AL732372.2-225ENST00000642124 456 ntBASIC4.11□□□□□ -1.75
CTDP1Q9Y5B0 MTND5P16-201ENST00000460269 1703 ntBASIC4.11□□□□□ -1.75
CTDP1Q9Y5B0 MTND5P19-201ENST00000424872 1794 ntBASIC4.11□□□□□ -1.75
CTDP1Q9Y5B0 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC4.11□□□□□ -1.75
CTDP1Q9Y5B0 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
CTDP1Q9Y5B0 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
CTDP1Q9Y5B0 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC4.1□□□□□ -1.75
CTDP1Q9Y5B0 Y_RNA.28-201ENST00000362554 111 ntBASIC4.1□□□□□ -1.75
CTDP1Q9Y5B0 RNU4-35P-201ENST00000362588 141 ntBASIC4.1□□□□□ -1.75
CTDP1Q9Y5B0 RNU6-562P-201ENST00000362731 107 ntBASIC4.1□□□□□ -1.75
CTDP1Q9Y5B0 Y_RNA.135-201ENST00000363439 95 ntBASIC4.1□□□□□ -1.75
CTDP1Q9Y5B0 RNA5SP267-201ENST00000364893 126 ntBASIC4.1□□□□□ -1.75
CTDP1Q9Y5B0 RNU6-715P-201ENST00000365204 103 ntBASIC4.1□□□□□ -1.75
CTDP1Q9Y5B0 AL139039.1-201ENST00000401900 692 ntBASIC4.1□□□□□ -1.75
CTDP1Q9Y5B0 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC4.1□□□□□ -1.75
CTDP1Q9Y5B0 UBE2Q2P12-201ENST00000414573 204 ntBASIC4.1□□□□□ -1.75
CTDP1Q9Y5B0 DBIP2-201ENST00000419076 262 ntBASIC4.1□□□□□ -1.75
CTDP1Q9Y5B0 RPL31P12-201ENST00000422587 358 ntBASIC4.1□□□□□ -1.75
CTDP1Q9Y5B0 PMCHL1-202ENST00000423102 261 ntBASIC4.1□□□□□ -1.75
CTDP1Q9Y5B0 PPP1R11P2-201ENST00000423543 382 ntBASIC4.1□□□□□ -1.75
CTDP1Q9Y5B0 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC4.1□□□□□ -1.75
CTDP1Q9Y5B0 SNRPEP4-201ENST00000435815 279 ntBASIC4.1□□□□□ -1.75
CTDP1Q9Y5B0 HMGB3P8-201ENST00000449709 577 ntBASIC4.1□□□□□ -1.75
CTDP1Q9Y5B0 AC079140.5-201ENST00000507882 310 ntBASIC4.1□□□□□ -1.75
CTDP1Q9Y5B0 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC4.1□□□□□ -1.75
CTDP1Q9Y5B0 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC4.1□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 126.4 ms