Protein–RNA interactions for Protein: Q9Y4P1

ATG4B, Cysteine protease ATG4B, humanhuman

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4BQ9Y4P1 AC010678.1-201ENST00000614118 713 ntBASIC2.46□□□□□ -2.02
ATG4BQ9Y4P1 SCARNA17.4-201ENST00000614296 143 ntBASIC2.46□□□□□ -2.02
ATG4BQ9Y4P1 MIR7515-201ENST00000637837 67 ntBASIC2.46□□□□□ -2.02
ATG4BQ9Y4P1 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
ATG4BQ9Y4P1 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC2.46□□□□□ -2.02
ATG4BQ9Y4P1 AL136360.1-201ENST00000503377 1900 ntBASIC2.45□□□□□ -2.02
ATG4BQ9Y4P1 ADAM3A-203ENST00000461344 2157 ntBASIC2.45□□□□□ -2.02
ATG4BQ9Y4P1 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.45□□□□□ -2.02
ATG4BQ9Y4P1 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
ATG4BQ9Y4P1 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC2.45□□□□□ -2.02
ATG4BQ9Y4P1 SNORD116-1-201ENST00000384335 95 ntBASIC2.45□□□□□ -2.02
ATG4BQ9Y4P1 SNORA24.1-201ENST00000384401 135 ntBASIC2.45□□□□□ -2.02
ATG4BQ9Y4P1 MIR196B-201ENST00000384852 84 ntBASIC2.45□□□□□ -2.02
ATG4BQ9Y4P1 AC080125.1-201ENST00000414888 684 ntBASIC2.45□□□□□ -2.02
ATG4BQ9Y4P1 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC2.45□□□□□ -2.02
ATG4BQ9Y4P1 AL109913.1-201ENST00000421173 514 ntBASIC2.45□□□□□ -2.02
ATG4BQ9Y4P1 MTCO2P34-201ENST00000421994 607 ntBASIC2.45□□□□□ -2.02
ATG4BQ9Y4P1 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC2.45□□□□□ -2.02
ATG4BQ9Y4P1 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC2.45□□□□□ -2.02
ATG4BQ9Y4P1 AL353706.1-201ENST00000436728 494 ntBASIC2.45□□□□□ -2.02
ATG4BQ9Y4P1 KRTAP19-11P-201ENST00000439851 104 ntBASIC2.45□□□□□ -2.02
ATG4BQ9Y4P1 AL031667.1-201ENST00000440222 725 ntBASIC2.45□□□□□ -2.02
ATG4BQ9Y4P1 NFIA-AS1-201ENST00000442027 384 ntTSL 2 BASIC2.45□□□□□ -2.02
ATG4BQ9Y4P1 MTCO1P19-201ENST00000443487 500 ntBASIC2.45□□□□□ -2.02
ATG4BQ9Y4P1 AL360221.1-201ENST00000445989 335 ntBASIC2.45□□□□□ -2.02
ATG4BQ9Y4P1 AL358075.2-201ENST00000452785 339 ntTSL 2 BASIC2.45□□□□□ -2.02
ATG4BQ9Y4P1 LINC01069-201ENST00000452933 546 ntTSL 5 BASIC2.45□□□□□ -2.02
ATG4BQ9Y4P1 KLF3P2-201ENST00000465138 268 ntBASIC2.45□□□□□ -2.02
ATG4BQ9Y4P1 AC079349.1-201ENST00000509096 589 ntTSL 2 BASIC2.45□□□□□ -2.02
ATG4BQ9Y4P1 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC2.45□□□□□ -2.02
ATG4BQ9Y4P1 AC096725.1-201ENST00000514266 313 ntBASIC2.45□□□□□ -2.02
ATG4BQ9Y4P1 RNU6-123P-201ENST00000516163 102 ntBASIC2.45□□□□□ -2.02
ATG4BQ9Y4P1 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC2.45□□□□□ -2.02
ATG4BQ9Y4P1 AC109329.2-201ENST00000519658 482 ntBASIC2.45□□□□□ -2.02
ATG4BQ9Y4P1 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC2.45□□□□□ -2.02
ATG4BQ9Y4P1 AP003730.2-202ENST00000527281 774 ntTSL 3 BASIC2.45□□□□□ -2.02
ATG4BQ9Y4P1 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
ATG4BQ9Y4P1 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC2.45□□□□□ -2.02
ATG4BQ9Y4P1 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC2.45□□□□□ -2.02
ATG4BQ9Y4P1 AC012213.3-201ENST00000577199 777 ntBASIC2.45□□□□□ -2.02
ATG4BQ9Y4P1 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC2.45□□□□□ -2.02
ATG4BQ9Y4P1 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC2.45□□□□□ -2.02
ATG4BQ9Y4P1 RSL24D1P11-201ENST00000591045 491 ntBASIC2.45□□□□□ -2.02
ATG4BQ9Y4P1 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC2.45□□□□□ -2.02
ATG4BQ9Y4P1 AC245014.2-201ENST00000603689 287 ntBASIC2.45□□□□□ -2.02
ATG4BQ9Y4P1 AC007938.3-201ENST00000604965 623 ntBASIC2.45□□□□□ -2.02
ATG4BQ9Y4P1 AC246785.4-201ENST00000605374 287 ntBASIC2.45□□□□□ -2.02
ATG4BQ9Y4P1 RN7SKP299-201ENST00000606679 301 ntBASIC2.45□□□□□ -2.02
ATG4BQ9Y4P1 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC2.45□□□□□ -2.02
ATG4BQ9Y4P1 MIR7157-201ENST00000635801 60 ntBASIC2.45□□□□□ -2.02
ATG4BQ9Y4P1 AC090582.1-201ENST00000636321 199 ntBASIC2.45□□□□□ -2.02
ATG4BQ9Y4P1 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC2.45□□□□□ -2.02
ATG4BQ9Y4P1 MTND5P30-201ENST00000452896 1731 ntBASIC2.45□□□□□ -2.02
ATG4BQ9Y4P1 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
ATG4BQ9Y4P1 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
ATG4BQ9Y4P1 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
ATG4BQ9Y4P1 CDC27P3-201ENST00000635418 1910 ntBASIC2.44□□□□□ -2.02
ATG4BQ9Y4P1 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC2.44□□□□□ -2.02
ATG4BQ9Y4P1 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
ATG4BQ9Y4P1 AC004520.1-201ENST00000608362 1413 ntBASIC2.44□□□□□ -2.02
ATG4BQ9Y4P1 SNORD62.1-201ENST00000362541 86 ntBASIC2.44□□□□□ -2.02
ATG4BQ9Y4P1 RNU1-100P-201ENST00000365255 165 ntBASIC2.44□□□□□ -2.02
ATG4BQ9Y4P1 RNU6-348P-201ENST00000384386 107 ntBASIC2.44□□□□□ -2.02
ATG4BQ9Y4P1 Y_RNA.553-201ENST00000384670 102 ntBASIC2.44□□□□□ -2.02
ATG4BQ9Y4P1 RPS4XP8-201ENST00000402039 771 ntBASIC2.44□□□□□ -2.02
ATG4BQ9Y4P1 AL096701.2-201ENST00000416920 238 ntBASIC2.44□□□□□ -2.02
ATG4BQ9Y4P1 AC000123.1-201ENST00000418215 516 ntTSL 5 BASIC2.44□□□□□ -2.02
ATG4BQ9Y4P1 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC2.44□□□□□ -2.02
ATG4BQ9Y4P1 AL445687.1-201ENST00000439946 251 ntBASIC2.44□□□□□ -2.02
ATG4BQ9Y4P1 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC2.44□□□□□ -2.02
ATG4BQ9Y4P1 MTATP6P26-201ENST00000445926 662 ntBASIC2.44□□□□□ -2.02
ATG4BQ9Y4P1 DPPA3P1-201ENST00000448050 469 ntBASIC2.44□□□□□ -2.02
ATG4BQ9Y4P1 AC109927.2-201ENST00000506416 303 ntBASIC2.44□□□□□ -2.02
ATG4BQ9Y4P1 ARL2BPP4-201ENST00000506854 471 ntBASIC2.44□□□□□ -2.02
ATG4BQ9Y4P1 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC2.44□□□□□ -2.02
ATG4BQ9Y4P1 MEF2C-AS1-208ENST00000512585 741 ntTSL 5 BASIC2.44□□□□□ -2.02
ATG4BQ9Y4P1 RNU6-1315P-201ENST00000517187 99 ntBASIC2.44□□□□□ -2.02
ATG4BQ9Y4P1 AC090572.1-201ENST00000519251 160 ntBASIC2.44□□□□□ -2.02
ATG4BQ9Y4P1 AC025755.1-201ENST00000521306 278 ntBASIC2.44□□□□□ -2.02
ATG4BQ9Y4P1 TAS2R43-201ENST00000531678 1027 ntAPPRIS P1 BASIC2.44□□□□□ -2.02
ATG4BQ9Y4P1 AC243972.3-201ENST00000539655 198 ntBASIC2.44□□□□□ -2.02
ATG4BQ9Y4P1 ADI1P3-201ENST00000549509 470 ntBASIC2.44□□□□□ -2.02
ATG4BQ9Y4P1 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC2.44□□□□□ -2.02
ATG4BQ9Y4P1 MIR1273C-201ENST00000578669 77 ntBASIC2.44□□□□□ -2.02
ATG4BQ9Y4P1 AC090616.3-201ENST00000582184 217 ntBASIC2.44□□□□□ -2.02
ATG4BQ9Y4P1 AC098848.2-201ENST00000588023 330 ntBASIC2.44□□□□□ -2.02
ATG4BQ9Y4P1 AL356280.1-201ENST00000603614 379 ntBASIC2.44□□□□□ -2.02
ATG4BQ9Y4P1 Z84480.1-201ENST00000605131 311 ntBASIC2.44□□□□□ -2.02
ATG4BQ9Y4P1 AL359547.2-201ENST00000615810 418 ntBASIC2.44□□□□□ -2.02
ATG4BQ9Y4P1 MIR6134-201ENST00000617606 109 ntBASIC2.44□□□□□ -2.02
ATG4BQ9Y4P1 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
ATG4BQ9Y4P1 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
ATG4BQ9Y4P1 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC2.43□□□□□ -2.02
ATG4BQ9Y4P1 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC2.43□□□□□ -2.02
ATG4BQ9Y4P1 Y_RNA.359-201ENST00000365498 102 ntBASIC2.43□□□□□ -2.02
ATG4BQ9Y4P1 MIR592-201ENST00000384959 97 ntBASIC2.43□□□□□ -2.02
ATG4BQ9Y4P1 CISD1P1-201ENST00000393907 327 ntBASIC2.43□□□□□ -2.02
ATG4BQ9Y4P1 AL356057.2-201ENST00000403318 432 ntBASIC2.43□□□□□ -2.02
ATG4BQ9Y4P1 RNU6-1025P-201ENST00000410629 104 ntBASIC2.43□□□□□ -2.02
ATG4BQ9Y4P1 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 127.7 ms