Protein–RNA interactions for Protein: Q9Y2E6

DTX4, E3 ubiquitin-protein ligase DTX4, humanhuman

Predictions only

Length 619 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DTX4Q9Y2E6 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC3.22□□□□□ -1.89
DTX4Q9Y2E6 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC3.22□□□□□ -1.89
DTX4Q9Y2E6 AC099506.2-201ENST00000623074 221 ntBASIC3.22□□□□□ -1.89
DTX4Q9Y2E6 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC3.22□□□□□ -1.89
DTX4Q9Y2E6 AL359693.1-201ENST00000614959 2407 ntBASIC3.22□□□□□ -1.89
DTX4Q9Y2E6 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.22□□□□□ -1.89
DTX4Q9Y2E6 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
DTX4Q9Y2E6 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC3.22□□□□□ -1.89
DTX4Q9Y2E6 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC3.21□□□□□ -1.89
DTX4Q9Y2E6 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC3.21□□□□□ -1.89
DTX4Q9Y2E6 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
DTX4Q9Y2E6 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC3.21□□□□□ -1.9
DTX4Q9Y2E6 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC3.21□□□□□ -1.9
DTX4Q9Y2E6 FTLP6-201ENST00000355274 422 ntBASIC3.21□□□□□ -1.9
DTX4Q9Y2E6 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
DTX4Q9Y2E6 Y_RNA.166-201ENST00000363730 102 ntBASIC3.21□□□□□ -1.9
DTX4Q9Y2E6 DYNLT3P1-201ENST00000378574 347 ntBASIC3.21□□□□□ -1.9
DTX4Q9Y2E6 Y_RNA.414-201ENST00000384011 101 ntBASIC3.21□□□□□ -1.9
DTX4Q9Y2E6 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
DTX4Q9Y2E6 RPS4XP3-201ENST00000398541 413 ntBASIC3.21□□□□□ -1.9
DTX4Q9Y2E6 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC3.21□□□□□ -1.9
DTX4Q9Y2E6 AL122016.1-201ENST00000403365 367 ntBASIC3.21□□□□□ -1.9
DTX4Q9Y2E6 RPS20P15-201ENST00000412792 311 ntBASIC3.21□□□□□ -1.9
DTX4Q9Y2E6 AL159987.2-201ENST00000432754 307 ntBASIC3.21□□□□□ -1.9
DTX4Q9Y2E6 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC3.21□□□□□ -1.9
DTX4Q9Y2E6 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC3.21□□□□□ -1.9
DTX4Q9Y2E6 AC009969.1-201ENST00000438726 172 ntBASIC3.21□□□□□ -1.9
DTX4Q9Y2E6 MRPS31P2-201ENST00000451581 518 ntBASIC3.21□□□□□ -1.9
DTX4Q9Y2E6 RNU6-329P-201ENST00000459618 107 ntBASIC3.21□□□□□ -1.9
DTX4Q9Y2E6 FGF7P4-201ENST00000509595 295 ntBASIC3.21□□□□□ -1.9
DTX4Q9Y2E6 AC008716.1-201ENST00000511084 513 ntBASIC3.21□□□□□ -1.9
DTX4Q9Y2E6 AC090136.1-201ENST00000520009 240 ntBASIC3.21□□□□□ -1.9
DTX4Q9Y2E6 AC025755.1-201ENST00000521306 278 ntBASIC3.21□□□□□ -1.9
DTX4Q9Y2E6 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC3.21□□□□□ -1.9
DTX4Q9Y2E6 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC3.21□□□□□ -1.9
DTX4Q9Y2E6 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC3.21□□□□□ -1.9
DTX4Q9Y2E6 AC005668.1-201ENST00000571142 476 ntBASIC3.21□□□□□ -1.9
DTX4Q9Y2E6 MIR4742-201ENST00000581069 85 ntBASIC3.21□□□□□ -1.9
DTX4Q9Y2E6 AC008962.1-201ENST00000605729 304 ntBASIC3.21□□□□□ -1.9
DTX4Q9Y2E6 U3.45-201ENST00000607547 219 ntBASIC3.21□□□□□ -1.9
DTX4Q9Y2E6 FTX_3.1-201ENST00000610451 147 ntBASIC3.21□□□□□ -1.9
DTX4Q9Y2E6 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
DTX4Q9Y2E6 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC3.21□□□□□ -1.9
DTX4Q9Y2E6 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
DTX4Q9Y2E6 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC3.21□□□□□ -1.9
DTX4Q9Y2E6 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
DTX4Q9Y2E6 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.2□□□□□ -1.9
DTX4Q9Y2E6 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
DTX4Q9Y2E6 RNU6-1252P-201ENST00000363054 104 ntBASIC3.2□□□□□ -1.9
DTX4Q9Y2E6 RNA5SP197-201ENST00000363357 119 ntBASIC3.2□□□□□ -1.9
DTX4Q9Y2E6 SNORD113-7-201ENST00000363762 77 ntBASIC3.2□□□□□ -1.9
DTX4Q9Y2E6 RNU6-1303P-201ENST00000364841 107 ntBASIC3.2□□□□□ -1.9
DTX4Q9Y2E6 RNU6-217P-201ENST00000384164 104 ntBASIC3.2□□□□□ -1.9
DTX4Q9Y2E6 MIR7-3-201ENST00000384898 110 ntBASIC3.2□□□□□ -1.9
DTX4Q9Y2E6 RPLP0P7-201ENST00000416050 667 ntBASIC3.2□□□□□ -1.9
DTX4Q9Y2E6 HSPE1P1-201ENST00000421494 318 ntBASIC3.2□□□□□ -1.9
DTX4Q9Y2E6 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC3.2□□□□□ -1.9
DTX4Q9Y2E6 AP000907.1-201ENST00000428428 510 ntBASIC3.2□□□□□ -1.9
DTX4Q9Y2E6 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
DTX4Q9Y2E6 NDUFA5P4-201ENST00000436704 385 ntBASIC3.2□□□□□ -1.9
DTX4Q9Y2E6 MRPL50P4-201ENST00000446432 475 ntBASIC3.2□□□□□ -1.9
DTX4Q9Y2E6 PPP1R2P5-201ENST00000457256 603 ntBASIC3.2□□□□□ -1.9
DTX4Q9Y2E6 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC3.2□□□□□ -1.9
DTX4Q9Y2E6 RPS26P21-201ENST00000475397 348 ntBASIC3.2□□□□□ -1.9
DTX4Q9Y2E6 RPL32P34-201ENST00000486380 400 ntBASIC3.2□□□□□ -1.9
DTX4Q9Y2E6 HMGB1P30-201ENST00000492455 606 ntBASIC3.2□□□□□ -1.9
DTX4Q9Y2E6 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC3.2□□□□□ -1.9
DTX4Q9Y2E6 AC110768.1-201ENST00000509222 400 ntBASIC3.2□□□□□ -1.9
DTX4Q9Y2E6 SNORA19.2-201ENST00000516013 114 ntBASIC3.2□□□□□ -1.9
DTX4Q9Y2E6 SNORA14.1-201ENST00000516113 141 ntBASIC3.2□□□□□ -1.9
DTX4Q9Y2E6 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC3.2□□□□□ -1.9
DTX4Q9Y2E6 AC011611.1-201ENST00000552179 197 ntBASIC3.2□□□□□ -1.9
DTX4Q9Y2E6 AC026464.5-201ENST00000562497 722 ntBASIC3.2□□□□□ -1.9
DTX4Q9Y2E6 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC3.2□□□□□ -1.9
DTX4Q9Y2E6 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC3.2□□□□□ -1.9
DTX4Q9Y2E6 AC005498.1-201ENST00000592125 465 ntBASIC3.2□□□□□ -1.9
DTX4Q9Y2E6 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
DTX4Q9Y2E6 AL132765.2-201ENST00000610812 351 ntBASIC3.2□□□□□ -1.9
DTX4Q9Y2E6 AC019176.2-201ENST00000611579 315 ntBASIC3.2□□□□□ -1.9
DTX4Q9Y2E6 AC068831.7-201ENST00000616954 363 ntBASIC3.2□□□□□ -1.9
DTX4Q9Y2E6 AC006111.3-201ENST00000622137 383 ntBASIC3.2□□□□□ -1.9
DTX4Q9Y2E6 AL031601.2-202ENST00000622650 282 ntBASIC3.2□□□□□ -1.9
DTX4Q9Y2E6 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC3.2□□□□□ -1.9
DTX4Q9Y2E6 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC3.2□□□□□ -1.9
DTX4Q9Y2E6 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
DTX4Q9Y2E6 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
DTX4Q9Y2E6 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
DTX4Q9Y2E6 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC3.2□□□□□ -1.9
DTX4Q9Y2E6 AC022336.2-201ENST00000568966 2538 ntBASIC3.2□□□□□ -1.9
DTX4Q9Y2E6 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.19□□□□□ -1.9
DTX4Q9Y2E6 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC3.19□□□□□ -1.9
DTX4Q9Y2E6 MTCO1P12-201ENST00000414273 1543 ntBASIC3.19□□□□□ -1.9
DTX4Q9Y2E6 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
DTX4Q9Y2E6 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
DTX4Q9Y2E6 Y_RNA.333-201ENST00000365274 102 ntBASIC3.19□□□□□ -1.9
DTX4Q9Y2E6 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
DTX4Q9Y2E6 XGY1-201ENST00000381172 446 ntBASIC3.19□□□□□ -1.9
DTX4Q9Y2E6 RNU6-1013P-201ENST00000384180 107 ntBASIC3.19□□□□□ -1.9
DTX4Q9Y2E6 Y_RNA.480-201ENST00000384364 102 ntBASIC3.19□□□□□ -1.9
DTX4Q9Y2E6 RPL7P10-201ENST00000417407 739 ntBASIC3.19□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 109.4 ms