Protein–RNA interactions for Protein: Q9UPQ7

PDZRN3, E3 ubiquitin-protein ligase PDZRN3, humanhuman

Predictions only

Length 1,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3Q9UPQ7 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC5.77□□□□□ -1.49
PDZRN3Q9UPQ7 RBBP6-203ENST00000381039 3384 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
PDZRN3Q9UPQ7 RIMS1-212ENST00000517827 3065 ntTSL 2 BASIC5.77□□□□□ -1.49
PDZRN3Q9UPQ7 POU2F1-202ENST00000367862 14038 ntAPPRIS ALT2 TSL 1 (best) BASIC5.77□□□□□ -1.49
PDZRN3Q9UPQ7 LINC01289-201ENST00000519550 3712 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
PDZRN3Q9UPQ7 MACF1-203ENST00000361689 17538 ntTSL 5 BASIC5.77□□□□□ -1.49
PDZRN3Q9UPQ7 AC021146.4-201ENST00000309229 279 ntBASIC5.77□□□□□ -1.49
PDZRN3Q9UPQ7 RNA5SP366-201ENST00000365454 123 ntBASIC5.77□□□□□ -1.49
PDZRN3Q9UPQ7 Y_RNA.405-201ENST00000383979 100 ntBASIC5.77□□□□□ -1.49
PDZRN3Q9UPQ7 Y_RNA.451-201ENST00000384200 100 ntBASIC5.77□□□□□ -1.49
PDZRN3Q9UPQ7 Y_RNA.524-201ENST00000384564 100 ntBASIC5.77□□□□□ -1.49
PDZRN3Q9UPQ7 Y_RNA.561-201ENST00000384694 100 ntBASIC5.77□□□□□ -1.49
PDZRN3Q9UPQ7 MIR521-1-201ENST00000384902 87 ntBASIC5.77□□□□□ -1.49
PDZRN3Q9UPQ7 SNORA46.1-201ENST00000391069 153 ntBASIC5.77□□□□□ -1.49
PDZRN3Q9UPQ7 LINC01341-201ENST00000419361 552 ntTSL 2 BASIC5.77□□□□□ -1.49
PDZRN3Q9UPQ7 AL122034.1-201ENST00000427609 497 ntTSL 2 BASIC5.77□□□□□ -1.49
PDZRN3Q9UPQ7 RPL36P19-201ENST00000430744 301 ntBASIC5.77□□□□□ -1.49
PDZRN3Q9UPQ7 RN7SL98P-201ENST00000462271 300 ntBASIC5.77□□□□□ -1.49
PDZRN3Q9UPQ7 UQCRHP4-201ENST00000471686 272 ntBASIC5.77□□□□□ -1.49
PDZRN3Q9UPQ7 RN7SL604P-201ENST00000492589 296 ntBASIC5.77□□□□□ -1.49
PDZRN3Q9UPQ7 HMGB1P21-201ENST00000502313 581 ntBASIC5.77□□□□□ -1.49
PDZRN3Q9UPQ7 SNORA31.9-201ENST00000516429 84 ntBASIC5.77□□□□□ -1.49
PDZRN3Q9UPQ7 RNU6-612P-201ENST00000516909 102 ntBASIC5.77□□□□□ -1.49
PDZRN3Q9UPQ7 CNTN5-209ENST00000528682 3800 ntAPPRIS P4 TSL 5 BASIC5.77□□□□□ -1.49
PDZRN3Q9UPQ7 CYCSP29-201ENST00000533731 318 ntBASIC5.77□□□□□ -1.49
PDZRN3Q9UPQ7 AC009509.2-201ENST00000538640 429 ntTSL 2 BASIC5.77□□□□□ -1.49
PDZRN3Q9UPQ7 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC5.77□□□□□ -1.49
PDZRN3Q9UPQ7 AC006329.2-201ENST00000611491 394 ntBASIC5.77□□□□□ -1.49
PDZRN3Q9UPQ7 SNORD39.4-201ENST00000620099 78 ntBASIC5.77□□□□□ -1.49
PDZRN3Q9UPQ7 C2CD6-204ENST00000450242 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC5.77□□□□□ -1.49
PDZRN3Q9UPQ7 UTS2B-201ENST00000340524 2395 ntAPPRIS P1 TSL 2 BASIC5.77□□□□□ -1.49
PDZRN3Q9UPQ7 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC5.76□□□□□ -1.49
PDZRN3Q9UPQ7 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
PDZRN3Q9UPQ7 LINC01187-201ENST00000506431 2314 ntTSL 5 BASIC5.76□□□□□ -1.49
PDZRN3Q9UPQ7 DTNA-208ENST00000554864 1680 ntAPPRIS ALT2 TSL 1 (best) BASIC5.76□□□□□ -1.49
PDZRN3Q9UPQ7 CENPE-202ENST00000380026 8241 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
PDZRN3Q9UPQ7 WDFY3-201ENST00000295888 14247 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
PDZRN3Q9UPQ7 ABI3BP-215ENST00000495063 3714 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
PDZRN3Q9UPQ7 RNU6-1301P-201ENST00000362724 104 ntBASIC5.76□□□□□ -1.49
PDZRN3Q9UPQ7 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC5.76□□□□□ -1.49
PDZRN3Q9UPQ7 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC5.76□□□□□ -1.49
PDZRN3Q9UPQ7 AC009237.7-201ENST00000447357 229 ntBASIC5.76□□□□□ -1.49
PDZRN3Q9UPQ7 GAPDHP27-201ENST00000447427 1020 ntBASIC5.76□□□□□ -1.49
PDZRN3Q9UPQ7 AC234775.1-201ENST00000454247 670 ntBASIC5.76□□□□□ -1.49
PDZRN3Q9UPQ7 RN7SKP210-201ENST00000459176 261 ntBASIC5.76□□□□□ -1.49
PDZRN3Q9UPQ7 RPL21P126-201ENST00000470049 478 ntBASIC5.76□□□□□ -1.49
PDZRN3Q9UPQ7 AC093767.1-201ENST00000504523 156 ntBASIC5.76□□□□□ -1.49
PDZRN3Q9UPQ7 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC5.76□□□□□ -1.49
PDZRN3Q9UPQ7 AC084838.1-201ENST00000532973 312 ntTSL 3 BASIC5.76□□□□□ -1.49
PDZRN3Q9UPQ7 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC5.76□□□□□ -1.49
PDZRN3Q9UPQ7 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC5.76□□□□□ -1.49
PDZRN3Q9UPQ7 MIR4423-201ENST00000580922 80 ntBASIC5.76□□□□□ -1.49
PDZRN3Q9UPQ7 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
PDZRN3Q9UPQ7 uc_338.9-201ENST00000617424 182 ntBASIC5.76□□□□□ -1.49
PDZRN3Q9UPQ7 AC025521.1-201ENST00000621624 286 ntBASIC5.76□□□□□ -1.49
PDZRN3Q9UPQ7 AL031601.2-202ENST00000622650 282 ntBASIC5.76□□□□□ -1.49
PDZRN3Q9UPQ7 MIR3653-201ENST00000625572 110 ntBASIC5.76□□□□□ -1.49
PDZRN3Q9UPQ7 RNA5SP196-201ENST00000625967 102 ntBASIC5.76□□□□□ -1.49
PDZRN3Q9UPQ7 AL589740.1-204ENST00000634677 630 ntTSL 4 BASIC5.76□□□□□ -1.49
PDZRN3Q9UPQ7 ST7-212ENST00000422922 1887 ntTSL 5 BASIC5.76□□□□□ -1.49
PDZRN3Q9UPQ7 SLC17A4-201ENST00000377905 3616 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
PDZRN3Q9UPQ7 RAP1B-201ENST00000250559 13438 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
PDZRN3Q9UPQ7 NFIB-203ENST00000380934 2142 ntTSL 2 BASIC5.75□□□□□ -1.49
PDZRN3Q9UPQ7 RWDD2B-207ENST00000493196 3094 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
PDZRN3Q9UPQ7 RPL9P7-201ENST00000330965 580 ntBASIC5.75□□□□□ -1.49
PDZRN3Q9UPQ7 RNU6-899P-201ENST00000363947 107 ntBASIC5.75□□□□□ -1.49
PDZRN3Q9UPQ7 RNU6-701P-201ENST00000384059 107 ntBASIC5.75□□□□□ -1.49
PDZRN3Q9UPQ7 RNU6-21P-201ENST00000384710 107 ntBASIC5.75□□□□□ -1.49
PDZRN3Q9UPQ7 HSPE1P8-201ENST00000406997 288 ntBASIC5.75□□□□□ -1.49
PDZRN3Q9UPQ7 RPL7AP73-201ENST00000413490 353 ntBASIC5.75□□□□□ -1.49
PDZRN3Q9UPQ7 AL160275.3-201ENST00000423876 471 ntBASIC5.75□□□□□ -1.49
PDZRN3Q9UPQ7 AL513043.1-201ENST00000439124 535 ntBASIC5.75□□□□□ -1.49
PDZRN3Q9UPQ7 RPS17P13-201ENST00000448974 407 ntBASIC5.75□□□□□ -1.49
PDZRN3Q9UPQ7 ANXA2P1-201ENST00000505539 926 ntBASIC5.75□□□□□ -1.49
PDZRN3Q9UPQ7 AC025741.1-201ENST00000506100 544 ntTSL 4 BASIC5.75□□□□□ -1.49
PDZRN3Q9UPQ7 RNU6-762P-201ENST00000517107 102 ntBASIC5.75□□□□□ -1.49
PDZRN3Q9UPQ7 IGLVIV-65-201ENST00000517313 360 ntBASIC5.75□□□□□ -1.49
PDZRN3Q9UPQ7 AC011363.1-201ENST00000524198 458 ntTSL 5 BASIC5.75□□□□□ -1.49
PDZRN3Q9UPQ7 AC104581.2-201ENST00000572227 430 ntBASIC5.75□□□□□ -1.49
PDZRN3Q9UPQ7 ARF4P1-201ENST00000605447 541 ntBASIC5.75□□□□□ -1.49
PDZRN3Q9UPQ7 MIR92B-201ENST00000607575 96 ntBASIC5.75□□□□□ -1.49
PDZRN3Q9UPQ7 AC007998.5-201ENST00000622938 237 ntBASIC5.75□□□□□ -1.49
PDZRN3Q9UPQ7 INPP4B-215ENST00000509777 4334 ntTSL 5 BASIC5.75□□□□□ -1.49
PDZRN3Q9UPQ7 DLG1-216ENST00000450955 2682 ntAPPRIS ALT1 TSL 5 BASIC5.75□□□□□ -1.49
PDZRN3Q9UPQ7 ZNF207-203ENST00000394670 13781 ntAPPRIS ALT1 TSL 1 (best) BASIC5.75□□□□□ -1.49
PDZRN3Q9UPQ7 IQGAP2-204ENST00000502745 3404 ntTSL 2 BASIC5.75□□□□□ -1.49
PDZRN3Q9UPQ7 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC5.75□□□□□ -1.49
PDZRN3Q9UPQ7 PPP1R9A-207ENST00000433881 9928 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
PDZRN3Q9UPQ7 SUPT16HP1-201ENST00000537175 3133 ntBASIC5.74□□□□□ -1.49
PDZRN3Q9UPQ7 OSBPL11-201ENST00000296220 4191 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
PDZRN3Q9UPQ7 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
PDZRN3Q9UPQ7 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
PDZRN3Q9UPQ7 AC011900.1-201ENST00000446838 2999 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
PDZRN3Q9UPQ7 LINC01109-201ENST00000603837 3081 ntBASIC5.74□□□□□ -1.49
PDZRN3Q9UPQ7 LINC01197-202ENST00000555332 3568 ntTSL 3 BASIC5.74□□□□□ -1.49
PDZRN3Q9UPQ7 PLCB4-204ENST00000378501 5833 ntAPPRIS P4 TSL 5 BASIC5.74□□□□□ -1.49
PDZRN3Q9UPQ7 CKAP5-202ENST00000354558 6428 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
PDZRN3Q9UPQ7 SYTL2-217ENST00000528231 3536 ntAPPRIS ALT1 TSL 1 (best) BASIC5.74□□□□□ -1.49
PDZRN3Q9UPQ7 RNU6-37P-201ENST00000362692 107 ntBASIC5.74□□□□□ -1.49
PDZRN3Q9UPQ7 RNU6-11P-201ENST00000364234 107 ntBASIC5.74□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 150.6 ms