Protein–RNA interactions for Protein: Q9NWM3

CUEDC1, CUE domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1Q9NWM3 SPTY2D1-AS1-204ENST00000634992 373 ntAPPRIS P5 TSL 5 BASIC4.91□□□□□ -1.62
CUEDC1Q9NWM3 GPATCH2L-214ENST00000621494 12396 ntAPPRIS P1 TSL 2 BASIC4.91□□□□□ -1.62
CUEDC1Q9NWM3 ADCY10-201ENST00000367848 5055 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
CUEDC1Q9NWM3 RNMT-202ENST00000383314 6250 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
CUEDC1Q9NWM3 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC4.91□□□□□ -1.62
CUEDC1Q9NWM3 AC135776.4-201ENST00000624300 1904 ntBASIC4.91□□□□□ -1.62
CUEDC1Q9NWM3 CD84-206ENST00000368054 8181 ntAPPRIS P3 TSL 1 (best) BASIC4.91□□□□□ -1.62
CUEDC1Q9NWM3 ARHGAP18-201ENST00000368149 4462 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
CUEDC1Q9NWM3 OR51H2P-202ENST00000641424 3046 ntBASIC4.91□□□□□ -1.62
CUEDC1Q9NWM3 AC006148.1-201ENST00000484322 4310 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
CUEDC1Q9NWM3 CKAP5-210ENST00000529230 7121 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.62
CUEDC1Q9NWM3 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC4.9□□□□□ -1.62
CUEDC1Q9NWM3 NRG1-220ENST00000539990 2401 ntTSL 2 BASIC4.9□□□□□ -1.62
CUEDC1Q9NWM3 RNU6-818P-201ENST00000364837 108 ntBASIC4.9□□□□□ -1.63
CUEDC1Q9NWM3 RNA5SP267-201ENST00000364893 126 ntBASIC4.9□□□□□ -1.63
CUEDC1Q9NWM3 RNU6-741P-201ENST00000383889 107 ntBASIC4.9□□□□□ -1.63
CUEDC1Q9NWM3 RNU6-20P-201ENST00000384106 107 ntBASIC4.9□□□□□ -1.63
CUEDC1Q9NWM3 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC4.9□□□□□ -1.63
CUEDC1Q9NWM3 TBCAP1-201ENST00000436520 327 ntBASIC4.9□□□□□ -1.63
CUEDC1Q9NWM3 AC016292.1-201ENST00000438344 235 ntTSL 3 BASIC4.9□□□□□ -1.63
CUEDC1Q9NWM3 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC4.9□□□□□ -1.63
CUEDC1Q9NWM3 AC096638.1-201ENST00000444678 216 ntBASIC4.9□□□□□ -1.63
CUEDC1Q9NWM3 AC074290.1-201ENST00000448883 135 ntBASIC4.9□□□□□ -1.63
CUEDC1Q9NWM3 AC097484.1-201ENST00000471148 389 ntBASIC4.9□□□□□ -1.63
CUEDC1Q9NWM3 RPL23AP75-201ENST00000491601 451 ntBASIC4.9□□□□□ -1.63
CUEDC1Q9NWM3 SNORA70.16-201ENST00000516390 95 ntBASIC4.9□□□□□ -1.63
CUEDC1Q9NWM3 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC4.9□□□□□ -1.63
CUEDC1Q9NWM3 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC4.9□□□□□ -1.63
CUEDC1Q9NWM3 AC091905.4-201ENST00000623432 202 ntBASIC4.9□□□□□ -1.63
CUEDC1Q9NWM3 GRIK2-201ENST00000318991 4317 ntTSL 5 BASIC4.9□□□□□ -1.63
CUEDC1Q9NWM3 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC4.9□□□□□ -1.63
CUEDC1Q9NWM3 A2MP1-204ENST00000566278 4130 ntBASIC4.9□□□□□ -1.63
CUEDC1Q9NWM3 Z94721.2-201ENST00000609590 5310 ntTSL 2 BASIC4.9□□□□□ -1.63
CUEDC1Q9NWM3 ERI2-202ENST00000357967 3499 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.63
CUEDC1Q9NWM3 INTS6P1-201ENST00000504674 2530 ntBASIC4.9□□□□□ -1.63
CUEDC1Q9NWM3 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.63
CUEDC1Q9NWM3 SCARNA15-201ENST00000607520 4325 ntBASIC4.9□□□□□ -1.63
CUEDC1Q9NWM3 PROM1-220ENST00000540805 3908 ntAPPRIS ALT2 TSL 5 BASIC4.9□□□□□ -1.63
CUEDC1Q9NWM3 R3HCC1L-202ENST00000314594 3198 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.63
CUEDC1Q9NWM3 NCOA3-201ENST00000371997 6750 ntAPPRIS ALT2 TSL 1 (best) BASIC4.89□□□□□ -1.63
CUEDC1Q9NWM3 FAM111B-202ENST00000411426 3344 ntTSL 4 BASIC4.89□□□□□ -1.63
CUEDC1Q9NWM3 AL033384.1-202ENST00000431554 3104 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
CUEDC1Q9NWM3 AC008568.2-201ENST00000623862 2313 ntBASIC4.89□□□□□ -1.63
CUEDC1Q9NWM3 CTAGE5-210ENST00000553728 4392 ntAPPRIS ALT2 TSL 5 BASIC4.89□□□□□ -1.63
CUEDC1Q9NWM3 RNU6-428P-201ENST00000362942 107 ntBASIC4.89□□□□□ -1.63
CUEDC1Q9NWM3 RNU6-512P-201ENST00000364438 103 ntBASIC4.89□□□□□ -1.63
CUEDC1Q9NWM3 RNVU1-6-201ENST00000364688 164 ntBASIC4.89□□□□□ -1.63
CUEDC1Q9NWM3 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC4.89□□□□□ -1.63
CUEDC1Q9NWM3 Y_RNA.563-201ENST00000384707 108 ntBASIC4.89□□□□□ -1.63
CUEDC1Q9NWM3 MIR153-2-201ENST00000385225 87 ntBASIC4.89□□□□□ -1.63
CUEDC1Q9NWM3 RNU2-2P-201ENST00000410396 191 ntBASIC4.89□□□□□ -1.63
CUEDC1Q9NWM3 GAS5-208ENST00000425771 242 ntTSL 3 BASIC4.89□□□□□ -1.63
CUEDC1Q9NWM3 RPL7AP61-201ENST00000443410 636 ntBASIC4.89□□□□□ -1.63
CUEDC1Q9NWM3 SCARNA15.2-201ENST00000516409 127 ntBASIC4.89□□□□□ -1.63
CUEDC1Q9NWM3 IGKV2D-19-201ENST00000523346 262 ntBASIC4.89□□□□□ -1.63
CUEDC1Q9NWM3 MIR4679-2-201ENST00000578358 77 ntBASIC4.89□□□□□ -1.63
CUEDC1Q9NWM3 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC4.89□□□□□ -1.63
CUEDC1Q9NWM3 RNU2-4P-201ENST00000606190 192 ntBASIC4.89□□□□□ -1.63
CUEDC1Q9NWM3 USP32P2-207ENST00000608376 253 ntTSL 5 BASIC4.89□□□□□ -1.63
CUEDC1Q9NWM3 U2.15-201ENST00000611544 191 ntBASIC4.89□□□□□ -1.63
CUEDC1Q9NWM3 U2.16-201ENST00000613119 191 ntBASIC4.89□□□□□ -1.63
CUEDC1Q9NWM3 U2.12-201ENST00000613778 191 ntBASIC4.89□□□□□ -1.63
CUEDC1Q9NWM3 U2.9-201ENST00000615427 191 ntBASIC4.89□□□□□ -1.63
CUEDC1Q9NWM3 U2.11-201ENST00000616345 191 ntBASIC4.89□□□□□ -1.63
CUEDC1Q9NWM3 U2.2-201ENST00000616535 191 ntBASIC4.89□□□□□ -1.63
CUEDC1Q9NWM3 AL591926.8-201ENST00000616876 211 ntBASIC4.89□□□□□ -1.63
CUEDC1Q9NWM3 U2.3-201ENST00000617785 191 ntBASIC4.89□□□□□ -1.63
CUEDC1Q9NWM3 U2.19-201ENST00000618602 191 ntBASIC4.89□□□□□ -1.63
CUEDC1Q9NWM3 RNU2-1-201ENST00000618664 191 ntBASIC4.89□□□□□ -1.63
CUEDC1Q9NWM3 U2.6-201ENST00000619225 191 ntBASIC4.89□□□□□ -1.63
CUEDC1Q9NWM3 U2.5-201ENST00000619465 191 ntBASIC4.89□□□□□ -1.63
CUEDC1Q9NWM3 U2.10-201ENST00000620268 191 ntBASIC4.89□□□□□ -1.63
CUEDC1Q9NWM3 AC008873.1-201ENST00000625051 138 ntBASIC4.89□□□□□ -1.63
CUEDC1Q9NWM3 AL589740.1-204ENST00000634677 630 ntTSL 4 BASIC4.89□□□□□ -1.63
CUEDC1Q9NWM3 AKAP9-201ENST00000356239 12471 ntAPPRIS P2 TSL 1 (best) BASIC4.89□□□□□ -1.63
CUEDC1Q9NWM3 AL672296.1-201ENST00000427780 2158 ntBASIC4.89□□□□□ -1.63
CUEDC1Q9NWM3 CDC23-202ENST00000394886 3155 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
CUEDC1Q9NWM3 PSMD1-213ENST00000619128 3161 ntAPPRIS ALT1 TSL 5 BASIC4.89□□□□□ -1.63
CUEDC1Q9NWM3 PTK2-212ENST00000519419 4439 ntTSL 5 BASIC4.89□□□□□ -1.63
CUEDC1Q9NWM3 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
CUEDC1Q9NWM3 CASC19-201ENST00000500112 5735 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
CUEDC1Q9NWM3 AC110774.1-201ENST00000623567 2018 ntBASIC4.89□□□□□ -1.63
CUEDC1Q9NWM3 PLEKHG7-203ENST00000638590 3267 ntAPPRIS P1 TSL 2 BASIC4.89□□□□□ -1.63
CUEDC1Q9NWM3 MED13-201ENST00000397786 10465 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
CUEDC1Q9NWM3 DNAH14-208ENST00000430092 13763 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
CUEDC1Q9NWM3 RBMS3-205ENST00000434693 8540 ntTSL 5 BASIC4.88□□□□□ -1.63
CUEDC1Q9NWM3 IPO5-201ENST00000261574 6003 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
CUEDC1Q9NWM3 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC4.88□□□□□ -1.63
CUEDC1Q9NWM3 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
CUEDC1Q9NWM3 A1CF-205ENST00000374001 9221 ntAPPRIS ALT1 TSL 5 BASIC4.88□□□□□ -1.63
CUEDC1Q9NWM3 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC4.88□□□□□ -1.63
CUEDC1Q9NWM3 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
CUEDC1Q9NWM3 SYT16-205ENST00000568344 13978 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
CUEDC1Q9NWM3 DTWD2-201ENST00000304058 4365 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
CUEDC1Q9NWM3 OR2AT4-205ENST00000641931 8357 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
CUEDC1Q9NWM3 LANCL1-204ENST00000441020 4503 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
CUEDC1Q9NWM3 TTC3-204ENST00000399017 10363 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
CUEDC1Q9NWM3 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
CUEDC1Q9NWM3 RNU6-1167P-201ENST00000363227 94 ntBASIC4.88□□□□□ -1.63
CUEDC1Q9NWM3 Y_RNA.182-201ENST00000363880 111 ntBASIC4.88□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 120.1 ms