Protein–RNA interactions for Protein: Q9H347

UBQLN3, Ubiquilin-3, humanhuman

Predictions only

Length 655 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN3Q9H347 AC098799.2-201ENST00000509466 868 ntBASIC2.6□□□□□ -1.99
UBQLN3Q9H347 AC010493.1-201ENST00000513479 292 ntBASIC2.6□□□□□ -1.99
UBQLN3Q9H347 RNA5SP367-201ENST00000516557 118 ntBASIC2.6□□□□□ -1.99
UBQLN3Q9H347 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC2.6□□□□□ -1.99
UBQLN3Q9H347 AF279873.4-202ENST00000521714 511 ntTSL 2 BASIC2.6□□□□□ -1.99
UBQLN3Q9H347 AP003072.2-201ENST00000527756 676 ntBASIC2.6□□□□□ -1.99
UBQLN3Q9H347 OR4R1P-201ENST00000529879 463 ntBASIC2.6□□□□□ -1.99
UBQLN3Q9H347 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC2.6□□□□□ -1.99
UBQLN3Q9H347 AL121821.2-201ENST00000556081 394 ntBASIC2.6□□□□□ -1.99
UBQLN3Q9H347 CYCSP39-201ENST00000565821 309 ntBASIC2.6□□□□□ -1.99
UBQLN3Q9H347 MIR3117-201ENST00000584034 78 ntBASIC2.6□□□□□ -1.99
UBQLN3Q9H347 AC023043.3-201ENST00000593113 385 ntBASIC2.6□□□□□ -1.99
UBQLN3Q9H347 RPL23AP88-201ENST00000605759 454 ntBASIC2.6□□□□□ -1.99
UBQLN3Q9H347 AC080013.6-201ENST00000606185 215 ntBASIC2.6□□□□□ -1.99
UBQLN3Q9H347 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC2.6□□□□□ -1.99
UBQLN3Q9H347 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC2.6□□□□□ -1.99
UBQLN3Q9H347 MTND5P17-201ENST00000418405 1603 ntBASIC2.6□□□□□ -1.99
UBQLN3Q9H347 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC2.6□□□□□ -1.99
UBQLN3Q9H347 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC2.6□□□□□ -1.99
UBQLN3Q9H347 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC2.6□□□□□ -1.99
UBQLN3Q9H347 ANKRD36BP1-202ENST00000604892 1417 ntBASIC2.59□□□□□ -1.99
UBQLN3Q9H347 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC2.59□□□□□ -1.99
UBQLN3Q9H347 FTX-214ENST00000638437 12267 ntTSL 5 BASIC2.59□□□□□ -1.99
UBQLN3Q9H347 SNORD115-7-201ENST00000365306 82 ntBASIC2.59□□□□□ -1.99
UBQLN3Q9H347 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC2.59□□□□□ -1.99
UBQLN3Q9H347 RNU6-1042P-201ENST00000384204 107 ntBASIC2.59□□□□□ -1.99
UBQLN3Q9H347 RNU6-1119P-201ENST00000384349 108 ntBASIC2.59□□□□□ -1.99
UBQLN3Q9H347 AL096799.1-201ENST00000425900 381 ntTSL 2 BASIC2.59□□□□□ -1.99
UBQLN3Q9H347 MTCO2P11-201ENST00000431069 680 ntBASIC2.59□□□□□ -1.99
UBQLN3Q9H347 AC105272.1-201ENST00000438604 198 ntBASIC2.59□□□□□ -1.99
UBQLN3Q9H347 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC2.59□□□□□ -1.99
UBQLN3Q9H347 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC2.59□□□□□ -1.99
UBQLN3Q9H347 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC2.59□□□□□ -1.99
UBQLN3Q9H347 AL078601.1-201ENST00000444542 271 ntBASIC2.59□□□□□ -1.99
UBQLN3Q9H347 OSTCP8-201ENST00000445117 448 ntBASIC2.59□□□□□ -1.99
UBQLN3Q9H347 AC132479.1-201ENST00000449160 144 ntBASIC2.59□□□□□ -1.99
UBQLN3Q9H347 AC022364.2-201ENST00000457963 554 ntBASIC2.59□□□□□ -1.99
UBQLN3Q9H347 TPT1P7-201ENST00000458300 517 ntBASIC2.59□□□□□ -1.99
UBQLN3Q9H347 AC006512.1-201ENST00000468816 291 ntBASIC2.59□□□□□ -1.99
UBQLN3Q9H347 OARD1-209ENST00000471367 401 ntTSL 2 BASIC2.59□□□□□ -1.99
UBQLN3Q9H347 AC117522.3-201ENST00000507974 584 ntBASIC2.59□□□□□ -1.99
UBQLN3Q9H347 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC2.59□□□□□ -1.99
UBQLN3Q9H347 AC098591.2-201ENST00000510152 315 ntBASIC2.59□□□□□ -1.99
UBQLN3Q9H347 SCARNA17.1-201ENST00000516211 143 ntBASIC2.59□□□□□ -1.99
UBQLN3Q9H347 SCARNA17.2-201ENST00000516334 143 ntBASIC2.59□□□□□ -1.99
UBQLN3Q9H347 RNU6-826P-201ENST00000516827 104 ntBASIC2.59□□□□□ -1.99
UBQLN3Q9H347 SCARNA11.3-201ENST00000517276 130 ntBASIC2.59□□□□□ -1.99
UBQLN3Q9H347 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC2.59□□□□□ -1.99
UBQLN3Q9H347 AP003392.2-201ENST00000527269 208 ntBASIC2.59□□□□□ -1.99
UBQLN3Q9H347 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
UBQLN3Q9H347 AC006199.1-201ENST00000548728 219 ntBASIC2.59□□□□□ -1.99
UBQLN3Q9H347 NDUFAF4P1-201ENST00000559425 519 ntBASIC2.59□□□□□ -1.99
UBQLN3Q9H347 ELOCP29-201ENST00000588193 334 ntBASIC2.59□□□□□ -1.99
UBQLN3Q9H347 AC016229.1-201ENST00000589242 487 ntTSL 5 BASIC2.59□□□□□ -1.99
UBQLN3Q9H347 AC005261.5-201ENST00000596280 355 ntBASIC2.59□□□□□ -1.99
UBQLN3Q9H347 AC004908.3-201ENST00000610248 625 ntBASIC2.59□□□□□ -1.99
UBQLN3Q9H347 SCARNA17.4-201ENST00000614296 143 ntBASIC2.59□□□□□ -1.99
UBQLN3Q9H347 GPR171-203ENST00000617554 960 ntAPPRIS P1 BASIC2.59□□□□□ -1.99
UBQLN3Q9H347 AC092656.1-203ENST00000624134 423 ntBASIC2.59□□□□□ -1.99
UBQLN3Q9H347 AC009161.2-201ENST00000624626 138 ntBASIC2.59□□□□□ -1.99
UBQLN3Q9H347 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC2.59□□□□□ -1.99
UBQLN3Q9H347 AL161431.1-201ENST00000618966 4205 ntBASIC2.59□□□□□ -1.99
UBQLN3Q9H347 AK9-203ENST00000368948 2478 ntTSL 5 BASIC2.59□□□□□ -2
UBQLN3Q9H347 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
UBQLN3Q9H347 PKIB-201ENST00000258014 1595 ntTSL 2 BASIC2.58□□□□□ -2
UBQLN3Q9H347 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC2.58□□□□□ -2
UBQLN3Q9H347 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC2.58□□□□□ -2
UBQLN3Q9H347 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC2.58□□□□□ -2
UBQLN3Q9H347 RNU6-1287P-201ENST00000362914 107 ntBASIC2.58□□□□□ -2
UBQLN3Q9H347 Y_RNA.111-201ENST00000363248 100 ntBASIC2.58□□□□□ -2
UBQLN3Q9H347 Y_RNA.296-201ENST00000364930 108 ntBASIC2.58□□□□□ -2
UBQLN3Q9H347 RNU6-116P-201ENST00000384042 109 ntBASIC2.58□□□□□ -2
UBQLN3Q9H347 Y_RNA.510-201ENST00000384511 114 ntBASIC2.58□□□□□ -2
UBQLN3Q9H347 RNU6-1060P-201ENST00000384664 107 ntBASIC2.58□□□□□ -2
UBQLN3Q9H347 RNU2-9P-201ENST00000410194 145 ntBASIC2.58□□□□□ -2
UBQLN3Q9H347 RNU6-387P-201ENST00000411331 105 ntBASIC2.58□□□□□ -2
UBQLN3Q9H347 RPS27L-202ENST00000411926 528 ntTSL 3 BASIC2.58□□□□□ -2
UBQLN3Q9H347 OR51A5P-201ENST00000415429 942 ntBASIC2.58□□□□□ -2
UBQLN3Q9H347 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC2.58□□□□□ -2
UBQLN3Q9H347 AC016907.1-201ENST00000419483 435 ntBASIC2.58□□□□□ -2
UBQLN3Q9H347 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC2.58□□□□□ -2
UBQLN3Q9H347 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC2.58□□□□□ -2
UBQLN3Q9H347 AL445687.1-201ENST00000439946 251 ntBASIC2.58□□□□□ -2
UBQLN3Q9H347 AL161651.1-201ENST00000440882 223 ntBASIC2.58□□□□□ -2
UBQLN3Q9H347 AL583843.1-201ENST00000456070 346 ntBASIC2.58□□□□□ -2
UBQLN3Q9H347 RPS29P15-201ENST00000458329 171 ntBASIC2.58□□□□□ -2
UBQLN3Q9H347 AC008571.1-201ENST00000467232 300 ntBASIC2.58□□□□□ -2
UBQLN3Q9H347 TRBV1-201ENST00000476502 284 ntBASIC2.58□□□□□ -2
UBQLN3Q9H347 UMAD1-204ENST00000482067 569 ntTSL 5 BASIC2.58□□□□□ -2
UBQLN3Q9H347 AC026801.1-201ENST00000497178 464 ntBASIC2.58□□□□□ -2
UBQLN3Q9H347 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC2.58□□□□□ -2
UBQLN3Q9H347 RNU6-581P-201ENST00000516214 105 ntBASIC2.58□□□□□ -2
UBQLN3Q9H347 AC008114.1-201ENST00000544122 427 ntTSL 2 BASIC2.58□□□□□ -2
UBQLN3Q9H347 LINC00933-203ENST00000559812 219 ntBASIC2.58□□□□□ -2
UBQLN3Q9H347 AC007151.1-201ENST00000572774 483 ntBASIC2.58□□□□□ -2
UBQLN3Q9H347 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC2.58□□□□□ -2
UBQLN3Q9H347 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC2.58□□□□□ -2
UBQLN3Q9H347 AL359740.1-201ENST00000624340 592 ntBASIC2.58□□□□□ -2
UBQLN3Q9H347 SEPT14P19-203ENST00000633205 211 ntBASIC2.58□□□□□ -2
UBQLN3Q9H347 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC2.58□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 135.4 ms