Protein–RNA interactions for Protein: Q9H211

CDT1, DNA replication factor Cdt1, humanhuman

Predictions only

Length 546 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1Q9H211 AC243972.3-201ENST00000539655 198 ntBASIC3.29□□□□□ -1.88
CDT1Q9H211 AC022080.3-201ENST00000544433 482 ntBASIC3.29□□□□□ -1.88
CDT1Q9H211 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC3.29□□□□□ -1.88
CDT1Q9H211 AC078814.3-201ENST00000553036 491 ntBASIC3.29□□□□□ -1.88
CDT1Q9H211 AL451007.1-201ENST00000595491 289 ntBASIC3.29□□□□□ -1.88
CDT1Q9H211 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC3.29□□□□□ -1.88
CDT1Q9H211 AC016727.1-205ENST00000605437 569 ntBASIC3.29□□□□□ -1.88
CDT1Q9H211 SRP72P2-201ENST00000344851 1979 ntBASIC3.29□□□□□ -1.88
CDT1Q9H211 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
CDT1Q9H211 ZNF807-201ENST00000328088 1707 ntBASIC3.28□□□□□ -1.88
CDT1Q9H211 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
CDT1Q9H211 RNU4-79P-201ENST00000362764 141 ntBASIC3.28□□□□□ -1.88
CDT1Q9H211 RNA5SP383-201ENST00000362934 120 ntBASIC3.28□□□□□ -1.88
CDT1Q9H211 Y_RNA.157-201ENST00000363638 102 ntBASIC3.28□□□□□ -1.88
CDT1Q9H211 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC3.28□□□□□ -1.88
CDT1Q9H211 Y_RNA.419-201ENST00000384041 102 ntBASIC3.28□□□□□ -1.88
CDT1Q9H211 RNU6-38P-201ENST00000384085 107 ntBASIC3.28□□□□□ -1.88
CDT1Q9H211 Y_RNA.500-201ENST00000384466 111 ntBASIC3.28□□□□□ -1.88
CDT1Q9H211 RNU6-1011P-201ENST00000384668 107 ntBASIC3.28□□□□□ -1.88
CDT1Q9H211 MT-TD-201ENST00000387419 68 ntBASIC3.28□□□□□ -1.88
CDT1Q9H211 MIR1290-201ENST00000408735 78 ntBASIC3.28□□□□□ -1.88
CDT1Q9H211 U3.42-201ENST00000408746 214 ntBASIC3.28□□□□□ -1.88
CDT1Q9H211 NDUFB4P5-201ENST00000415445 361 ntBASIC3.28□□□□□ -1.88
CDT1Q9H211 BTF3L4P3-201ENST00000418879 476 ntBASIC3.28□□□□□ -1.88
CDT1Q9H211 RPL31P12-201ENST00000422587 358 ntBASIC3.28□□□□□ -1.88
CDT1Q9H211 UBE2D3P2-201ENST00000424409 445 ntBASIC3.28□□□□□ -1.88
CDT1Q9H211 AL356867.1-201ENST00000429623 299 ntBASIC3.28□□□□□ -1.88
CDT1Q9H211 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC3.28□□□□□ -1.88
CDT1Q9H211 RNU6-333P-201ENST00000459117 107 ntBASIC3.28□□□□□ -1.88
CDT1Q9H211 HMGN2P26-201ENST00000463169 339 ntBASIC3.28□□□□□ -1.88
CDT1Q9H211 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC3.28□□□□□ -1.88
CDT1Q9H211 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC3.28□□□□□ -1.88
CDT1Q9H211 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC3.28□□□□□ -1.88
CDT1Q9H211 RNU6-123P-201ENST00000516163 102 ntBASIC3.28□□□□□ -1.88
CDT1Q9H211 RNU6-277P-201ENST00000516272 106 ntBASIC3.28□□□□□ -1.88
CDT1Q9H211 RNU6-1038P-201ENST00000516516 104 ntBASIC3.28□□□□□ -1.88
CDT1Q9H211 Y_RNA.701-201ENST00000516812 110 ntBASIC3.28□□□□□ -1.88
CDT1Q9H211 SNORD60.2-201ENST00000516883 86 ntBASIC3.28□□□□□ -1.88
CDT1Q9H211 AL118558.2-201ENST00000556294 238 ntBASIC3.28□□□□□ -1.88
CDT1Q9H211 H3F3AP1-201ENST00000559984 334 ntBASIC3.28□□□□□ -1.88
CDT1Q9H211 MIR5583-1-201ENST00000580941 59 ntBASIC3.28□□□□□ -1.88
CDT1Q9H211 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC3.28□□□□□ -1.88
CDT1Q9H211 AC008521.1-201ENST00000587471 187 ntBASIC3.28□□□□□ -1.88
CDT1Q9H211 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC3.28□□□□□ -1.88
CDT1Q9H211 AC013553.2-201ENST00000604244 589 ntBASIC3.28□□□□□ -1.88
CDT1Q9H211 AL158032.1-201ENST00000605401 106 ntBASIC3.28□□□□□ -1.88
CDT1Q9H211 RNU6-89P-201ENST00000606519 100 ntBASIC3.28□□□□□ -1.88
CDT1Q9H211 AC130324.3-201ENST00000614165 542 ntBASIC3.28□□□□□ -1.88
CDT1Q9H211 AL110115.1-201ENST00000614396 364 ntBASIC3.28□□□□□ -1.88
CDT1Q9H211 AC068831.7-201ENST00000616954 363 ntBASIC3.28□□□□□ -1.88
CDT1Q9H211 AC007318.2-201ENST00000620999 243 ntBASIC3.28□□□□□ -1.88
CDT1Q9H211 AL133216.2-202ENST00000634512 349 ntBASIC3.28□□□□□ -1.88
CDT1Q9H211 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
CDT1Q9H211 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
CDT1Q9H211 AC008568.2-201ENST00000623862 2313 ntBASIC3.27□□□□□ -1.89
CDT1Q9H211 AC004972.1-201ENST00000623934 2209 ntBASIC3.27□□□□□ -1.89
CDT1Q9H211 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
CDT1Q9H211 AC004944.1-201ENST00000517807 3059 ntBASIC3.27□□□□□ -1.89
CDT1Q9H211 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
CDT1Q9H211 Y_RNA.184-201ENST00000363884 108 ntBASIC3.27□□□□□ -1.89
CDT1Q9H211 RNU6-831P-201ENST00000384548 107 ntBASIC3.27□□□□□ -1.89
CDT1Q9H211 Z85995.1-201ENST00000415547 335 ntBASIC3.27□□□□□ -1.89
CDT1Q9H211 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC3.27□□□□□ -1.89
CDT1Q9H211 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC3.27□□□□□ -1.89
CDT1Q9H211 AL645937.1-202ENST00000421799 937 ntBASIC3.27□□□□□ -1.89
CDT1Q9H211 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC3.27□□□□□ -1.89
CDT1Q9H211 HMGB1P27-201ENST00000431429 603 ntBASIC3.27□□□□□ -1.89
CDT1Q9H211 SNRPEP4-201ENST00000435815 279 ntBASIC3.27□□□□□ -1.89
CDT1Q9H211 AC007677.1-201ENST00000445757 515 ntBASIC3.27□□□□□ -1.89
CDT1Q9H211 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC3.27□□□□□ -1.89
CDT1Q9H211 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC3.27□□□□□ -1.89
CDT1Q9H211 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC3.27□□□□□ -1.89
CDT1Q9H211 RPL7P5-201ENST00000471472 736 ntBASIC3.27□□□□□ -1.89
CDT1Q9H211 HMGN2P13-201ENST00000476476 274 ntBASIC3.27□□□□□ -1.89
CDT1Q9H211 RPS29P26-201ENST00000477483 171 ntBASIC3.27□□□□□ -1.89
CDT1Q9H211 AC103851.1-201ENST00000506833 274 ntBASIC3.27□□□□□ -1.89
CDT1Q9H211 AC104806.1-201ENST00000508720 308 ntBASIC3.27□□□□□ -1.89
CDT1Q9H211 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC3.27□□□□□ -1.89
CDT1Q9H211 RNU4-49P-201ENST00000516080 140 ntBASIC3.27□□□□□ -1.89
CDT1Q9H211 AC090136.1-201ENST00000520009 240 ntBASIC3.27□□□□□ -1.89
CDT1Q9H211 AC105029.1-201ENST00000520250 669 ntBASIC3.27□□□□□ -1.89
CDT1Q9H211 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC3.27□□□□□ -1.89
CDT1Q9H211 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC3.27□□□□□ -1.89
CDT1Q9H211 MIR4703-201ENST00000577728 79 ntBASIC3.27□□□□□ -1.89
CDT1Q9H211 MIR3124-201ENST00000582636 67 ntBASIC3.27□□□□□ -1.89
CDT1Q9H211 VN1R80P-201ENST00000597126 338 ntBASIC3.27□□□□□ -1.89
CDT1Q9H211 AL050343.2-201ENST00000607338 280 ntBASIC3.27□□□□□ -1.89
CDT1Q9H211 AC093732.2-201ENST00000607950 274 ntBASIC3.27□□□□□ -1.89
CDT1Q9H211 AC012409.4-201ENST00000612923 249 ntBASIC3.27□□□□□ -1.89
CDT1Q9H211 AP001486.3-201ENST00000615334 372 ntBASIC3.27□□□□□ -1.89
CDT1Q9H211 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
CDT1Q9H211 MTND5P42-201ENST00000637720 498 ntBASIC3.27□□□□□ -1.89
CDT1Q9H211 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.27□□□□□ -1.89
CDT1Q9H211 AC000403.1-201ENST00000613696 3585 ntBASIC3.27□□□□□ -1.89
CDT1Q9H211 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC3.27□□□□□ -1.89
CDT1Q9H211 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
CDT1Q9H211 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
CDT1Q9H211 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC3.26□□□□□ -1.89
CDT1Q9H211 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC3.26□□□□□ -1.89
CDT1Q9H211 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC3.26□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 128.2 ms