Protein–RNA interactions for Protein: Q9H1E3

NUCKS1, Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1, humanhuman

Known RBP Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUCKS1Q9H1E3 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
NUCKS1Q9H1E3 Y_RNA.33-201ENST00000362591 102 ntBASIC5□□□□□ -1.61
NUCKS1Q9H1E3 Y_RNA.123-201ENST00000363338 102 ntBASIC5□□□□□ -1.61
NUCKS1Q9H1E3 Y_RNA.400-201ENST00000383963 111 ntBASIC5□□□□□ -1.61
NUCKS1Q9H1E3 TRBV24-1-201ENST00000390397 381 ntAPPRIS P1 BASIC5□□□□□ -1.61
NUCKS1Q9H1E3 RN7SKP100-201ENST00000411258 284 ntBASIC5□□□□□ -1.61
NUCKS1Q9H1E3 SNORD2.1-201ENST00000458762 69 ntBASIC5□□□□□ -1.61
NUCKS1Q9H1E3 GMPSP1-201ENST00000514075 579 ntBASIC5□□□□□ -1.61
NUCKS1Q9H1E3 RNU5F-8P-201ENST00000515941 111 ntBASIC5□□□□□ -1.61
NUCKS1Q9H1E3 RNA5SP471-201ENST00000516971 106 ntBASIC5□□□□□ -1.61
NUCKS1Q9H1E3 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC5□□□□□ -1.61
NUCKS1Q9H1E3 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC5□□□□□ -1.61
NUCKS1Q9H1E3 AC091042.1-201ENST00000579213 173 ntBASIC5□□□□□ -1.61
NUCKS1Q9H1E3 AC023575.1-201ENST00000580510 358 ntBASIC5□□□□□ -1.61
NUCKS1Q9H1E3 5S_rRNA.16-201ENST00000612928 119 ntBASIC5□□□□□ -1.61
NUCKS1Q9H1E3 AC084757.4-201ENST00000616350 526 ntBASIC5□□□□□ -1.61
NUCKS1Q9H1E3 AC073349.3-201ENST00000617616 186 ntBASIC5□□□□□ -1.61
NUCKS1Q9H1E3 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC5□□□□□ -1.61
NUCKS1Q9H1E3 C12orf45-204ENST00000552951 23529 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
NUCKS1Q9H1E3 SLC5A12-202ENST00000396005 6250 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
NUCKS1Q9H1E3 SDAD1P1-202ENST00000524156 2051 ntBASIC5□□□□□ -1.61
NUCKS1Q9H1E3 NCAPGP1-201ENST00000505112 1814 ntBASIC5□□□□□ -1.61
NUCKS1Q9H1E3 IQGAP2-204ENST00000502745 3404 ntTSL 2 BASIC4.99□□□□□ -1.61
NUCKS1Q9H1E3 BCAP29-203ENST00000379119 5773 ntTSL 3 BASIC4.99□□□□□ -1.61
NUCKS1Q9H1E3 OR5H14-202ENST00000641380 7323 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
NUCKS1Q9H1E3 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC4.99□□□□□ -1.61
NUCKS1Q9H1E3 RNU6-227P-201ENST00000362865 103 ntBASIC4.99□□□□□ -1.61
NUCKS1Q9H1E3 RNU6-76P-201ENST00000384060 104 ntBASIC4.99□□□□□ -1.61
NUCKS1Q9H1E3 MIR3074-201ENST00000384885 81 ntBASIC4.99□□□□□ -1.61
NUCKS1Q9H1E3 MIR301A-201ENST00000385261 86 ntBASIC4.99□□□□□ -1.61
NUCKS1Q9H1E3 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC4.99□□□□□ -1.61
NUCKS1Q9H1E3 AL035461.1-201ENST00000421490 332 ntBASIC4.99□□□□□ -1.61
NUCKS1Q9H1E3 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC4.99□□□□□ -1.61
NUCKS1Q9H1E3 AL080313.1-201ENST00000434947 405 ntTSL 2 BASIC4.99□□□□□ -1.61
NUCKS1Q9H1E3 Z82188.1-201ENST00000436709 154 ntBASIC4.99□□□□□ -1.61
NUCKS1Q9H1E3 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC4.99□□□□□ -1.61
NUCKS1Q9H1E3 Z99127.1-202ENST00000448686 526 ntTSL 2 BASIC4.99□□□□□ -1.61
NUCKS1Q9H1E3 SSXP4-201ENST00000451349 245 ntBASIC4.99□□□□□ -1.61
NUCKS1Q9H1E3 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC4.99□□□□□ -1.61
NUCKS1Q9H1E3 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC4.99□□□□□ -1.61
NUCKS1Q9H1E3 RNU6-927P-201ENST00000516199 100 ntBASIC4.99□□□□□ -1.61
NUCKS1Q9H1E3 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC4.99□□□□□ -1.61
NUCKS1Q9H1E3 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC4.99□□□□□ -1.61
NUCKS1Q9H1E3 AL161629.2-201ENST00000615347 275 ntBASIC4.99□□□□□ -1.61
NUCKS1Q9H1E3 AC091905.2-201ENST00000623143 306 ntBASIC4.99□□□□□ -1.61
NUCKS1Q9H1E3 SAMSN1-201ENST00000285670 2185 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
NUCKS1Q9H1E3 PIKFYVE-201ENST00000264380 9901 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
NUCKS1Q9H1E3 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC4.98□□□□□ -1.61
NUCKS1Q9H1E3 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
NUCKS1Q9H1E3 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC4.98□□□□□ -1.61
NUCKS1Q9H1E3 ADGRL2-201ENST00000319517 5479 ntAPPRIS P2 TSL 1 (best) BASIC4.98□□□□□ -1.61
NUCKS1Q9H1E3 R3HCC1L-201ENST00000298999 3379 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
NUCKS1Q9H1E3 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
NUCKS1Q9H1E3 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
NUCKS1Q9H1E3 MS4A1-201ENST00000345732 3331 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
NUCKS1Q9H1E3 RNU6-512P-201ENST00000364438 103 ntBASIC4.98□□□□□ -1.61
NUCKS1Q9H1E3 RNA5SP205-201ENST00000364653 136 ntBASIC4.98□□□□□ -1.61
NUCKS1Q9H1E3 RNU6-21P-201ENST00000384710 107 ntBASIC4.98□□□□□ -1.61
NUCKS1Q9H1E3 RNU2-50P-201ENST00000410494 143 ntBASIC4.98□□□□□ -1.61
NUCKS1Q9H1E3 AC008267.6-201ENST00000441664 139 ntBASIC4.98□□□□□ -1.61
NUCKS1Q9H1E3 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
NUCKS1Q9H1E3 AC007395.1-201ENST00000451333 677 ntBASIC4.98□□□□□ -1.61
NUCKS1Q9H1E3 AC008897.1-201ENST00000494006 347 ntBASIC4.98□□□□□ -1.61
NUCKS1Q9H1E3 RN7SKP276-201ENST00000516242 268 ntBASIC4.98□□□□□ -1.61
NUCKS1Q9H1E3 RNU6-143P-201ENST00000516942 93 ntBASIC4.98□□□□□ -1.61
NUCKS1Q9H1E3 AC002428.2-201ENST00000522973 414 ntTSL 3 BASIC4.98□□□□□ -1.61
NUCKS1Q9H1E3 ATP5F1P5-201ENST00000526403 760 ntBASIC4.98□□□□□ -1.61
NUCKS1Q9H1E3 IGHV4OR15-8-201ENST00000557788 353 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
NUCKS1Q9H1E3 AC087501.4-201ENST00000574460 235 ntTSL 5 BASIC4.98□□□□□ -1.61
NUCKS1Q9H1E3 MIR4700-201ENST00000578311 74 ntBASIC4.98□□□□□ -1.61
NUCKS1Q9H1E3 AC060766.3-201ENST00000591442 263 ntBASIC4.98□□□□□ -1.61
NUCKS1Q9H1E3 AC135068.2-201ENST00000622410 353 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
NUCKS1Q9H1E3 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
NUCKS1Q9H1E3 CARF-208ENST00000428585 2513 ntTSL 2 BASIC4.98□□□□□ -1.61
NUCKS1Q9H1E3 KYNU-201ENST00000264170 15316 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
NUCKS1Q9H1E3 AC006971.1-201ENST00000407916 4486 ntBASIC4.98□□□□□ -1.61
NUCKS1Q9H1E3 STEAP2-203ENST00000394622 6612 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
NUCKS1Q9H1E3 SLC30A6-205ENST00000435660 4776 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
NUCKS1Q9H1E3 ZNF208-207ENST00000609966 3653 ntTSL 5 BASIC4.97□□□□□ -1.61
NUCKS1Q9H1E3 AC100821.1-201ENST00000523153 2479 ntBASIC4.97□□□□□ -1.61
NUCKS1Q9H1E3 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
NUCKS1Q9H1E3 RNU6-428P-201ENST00000362942 107 ntBASIC4.97□□□□□ -1.61
NUCKS1Q9H1E3 RNU6-153P-201ENST00000364422 104 ntBASIC4.97□□□□□ -1.61
NUCKS1Q9H1E3 RNVU1-6-201ENST00000364688 164 ntBASIC4.97□□□□□ -1.61
NUCKS1Q9H1E3 Y_RNA.273-201ENST00000364703 102 ntBASIC4.97□□□□□ -1.61
NUCKS1Q9H1E3 RNA5SP22-201ENST00000365393 109 ntBASIC4.97□□□□□ -1.61
NUCKS1Q9H1E3 RNU6-449P-201ENST00000383914 107 ntBASIC4.97□□□□□ -1.61
NUCKS1Q9H1E3 RNU6-318P-201ENST00000384283 103 ntBASIC4.97□□□□□ -1.61
NUCKS1Q9H1E3 SDHCP2-201ENST00000398565 501 ntBASIC4.97□□□□□ -1.61
NUCKS1Q9H1E3 RNU6-1025P-201ENST00000410629 104 ntBASIC4.97□□□□□ -1.61
NUCKS1Q9H1E3 RNU5A-5P-201ENST00000411054 116 ntBASIC4.97□□□□□ -1.61
NUCKS1Q9H1E3 AL358472.1-201ENST00000431295 329 ntBASIC4.97□□□□□ -1.61
NUCKS1Q9H1E3 S100A11P1-201ENST00000477525 312 ntBASIC4.97□□□□□ -1.61
NUCKS1Q9H1E3 RPS23P1-201ENST00000491662 432 ntBASIC4.97□□□□□ -1.61
NUCKS1Q9H1E3 SNORA27.4-201ENST00000516650 95 ntBASIC4.97□□□□□ -1.61
NUCKS1Q9H1E3 RNU7-110P-201ENST00000516891 62 ntBASIC4.97□□□□□ -1.61
NUCKS1Q9H1E3 AC100770.1-201ENST00000532310 322 ntBASIC4.97□□□□□ -1.61
NUCKS1Q9H1E3 AK6P2-201ENST00000549020 471 ntBASIC4.97□□□□□ -1.61
NUCKS1Q9H1E3 MIR4423-201ENST00000580922 80 ntBASIC4.97□□□□□ -1.61
NUCKS1Q9H1E3 MIR4270-201ENST00000581799 70 ntBASIC4.97□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 106.7 ms