Protein–RNA interactions for Protein: Q9H078

CLPB, Caseinolytic peptidase B protein homolog, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPBQ9H078 RNU2-69P-201ENST00000516061 100 ntBASIC3.27□□□□□ -1.89
CLPBQ9H078 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC3.27□□□□□ -1.89
CLPBQ9H078 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC3.27□□□□□ -1.89
CLPBQ9H078 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
CLPBQ9H078 BNIP3P6-201ENST00000549284 499 ntBASIC3.27□□□□□ -1.89
CLPBQ9H078 AL118558.2-201ENST00000556294 238 ntBASIC3.27□□□□□ -1.89
CLPBQ9H078 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC3.27□□□□□ -1.89
CLPBQ9H078 AL157817.1-201ENST00000614264 790 ntBASIC3.27□□□□□ -1.89
CLPBQ9H078 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC3.27□□□□□ -1.89
CLPBQ9H078 PLCE1P1-201ENST00000622094 305 ntBASIC3.27□□□□□ -1.89
CLPBQ9H078 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC3.27□□□□□ -1.89
CLPBQ9H078 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC3.27□□□□□ -1.89
CLPBQ9H078 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
CLPBQ9H078 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC3.27□□□□□ -1.89
CLPBQ9H078 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
CLPBQ9H078 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC3.26□□□□□ -1.89
CLPBQ9H078 AC010680.1-201ENST00000590024 3590 ntBASIC3.26□□□□□ -1.89
CLPBQ9H078 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
CLPBQ9H078 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.26□□□□□ -1.89
CLPBQ9H078 RNU6-778P-201ENST00000363269 103 ntBASIC3.26□□□□□ -1.89
CLPBQ9H078 RNU6-522P-201ENST00000364497 107 ntBASIC3.26□□□□□ -1.89
CLPBQ9H078 U3.12-201ENST00000364498 214 ntBASIC3.26□□□□□ -1.89
CLPBQ9H078 MDM4-202ENST00000367180 547 ntTSL 3 BASIC3.26□□□□□ -1.89
CLPBQ9H078 RNU6-434P-201ENST00000384376 107 ntBASIC3.26□□□□□ -1.89
CLPBQ9H078 RNU6-393P-201ENST00000384475 107 ntBASIC3.26□□□□□ -1.89
CLPBQ9H078 SNORD70.1-201ENST00000391007 85 ntBASIC3.26□□□□□ -1.89
CLPBQ9H078 SNORA48.5-201ENST00000391143 135 ntBASIC3.26□□□□□ -1.89
CLPBQ9H078 CD3D-202ENST00000392884 476 ntTSL 2 BASIC3.26□□□□□ -1.89
CLPBQ9H078 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC3.26□□□□□ -1.89
CLPBQ9H078 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC3.26□□□□□ -1.89
CLPBQ9H078 HMGN2P20-201ENST00000437531 273 ntBASIC3.26□□□□□ -1.89
CLPBQ9H078 BRK1P2-201ENST00000442875 223 ntBASIC3.26□□□□□ -1.89
CLPBQ9H078 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC3.26□□□□□ -1.89
CLPBQ9H078 Y_RNA.654-201ENST00000497848 106 ntBASIC3.26□□□□□ -1.89
CLPBQ9H078 AC008716.1-201ENST00000511084 513 ntBASIC3.26□□□□□ -1.89
CLPBQ9H078 RNU6-703P-201ENST00000516946 107 ntBASIC3.26□□□□□ -1.89
CLPBQ9H078 OR11H5P-201ENST00000554039 926 ntBASIC3.26□□□□□ -1.89
CLPBQ9H078 MIR5004-201ENST00000579078 107 ntBASIC3.26□□□□□ -1.89
CLPBQ9H078 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC3.26□□□□□ -1.89
CLPBQ9H078 AC073539.2-201ENST00000597113 165 ntBASIC3.26□□□□□ -1.89
CLPBQ9H078 AC006111.3-201ENST00000622137 383 ntBASIC3.26□□□□□ -1.89
CLPBQ9H078 AC022418.1-201ENST00000624118 445 ntBASIC3.26□□□□□ -1.89
CLPBQ9H078 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC3.26□□□□□ -1.89
CLPBQ9H078 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC3.26□□□□□ -1.89
CLPBQ9H078 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC3.26□□□□□ -1.89
CLPBQ9H078 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC3.26□□□□□ -1.89
CLPBQ9H078 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC3.25□□□□□ -1.89
CLPBQ9H078 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC3.25□□□□□ -1.89
CLPBQ9H078 MIR148B-201ENST00000362252 99 ntBASIC3.25□□□□□ -1.89
CLPBQ9H078 RNU1-70P-201ENST00000362618 164 ntBASIC3.25□□□□□ -1.89
CLPBQ9H078 Y_RNA.88-201ENST00000363029 99 ntBASIC3.25□□□□□ -1.89
CLPBQ9H078 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC3.25□□□□□ -1.89
CLPBQ9H078 RNU6-45P-201ENST00000384471 107 ntBASIC3.25□□□□□ -1.89
CLPBQ9H078 SNORA40C-201ENST00000391285 128 ntBASIC3.25□□□□□ -1.89
CLPBQ9H078 RPL21P90-201ENST00000415692 466 ntBASIC3.25□□□□□ -1.89
CLPBQ9H078 AC007463.1-201ENST00000416534 734 ntTSL 3 BASIC3.25□□□□□ -1.89
CLPBQ9H078 AC099548.1-201ENST00000421443 426 ntBASIC3.25□□□□□ -1.89
CLPBQ9H078 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC3.25□□□□□ -1.89
CLPBQ9H078 AC098614.2-201ENST00000426040 255 ntBASIC3.25□□□□□ -1.89
CLPBQ9H078 AC006028.1-201ENST00000438379 402 ntBASIC3.25□□□□□ -1.89
CLPBQ9H078 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC3.25□□□□□ -1.89
CLPBQ9H078 AL671855.1-201ENST00000446875 1203 ntBASIC3.25□□□□□ -1.89
CLPBQ9H078 RNU6-1208P-201ENST00000459588 107 ntBASIC3.25□□□□□ -1.89
CLPBQ9H078 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC3.25□□□□□ -1.89
CLPBQ9H078 AC139453.3-201ENST00000493276 369 ntBASIC3.25□□□□□ -1.89
CLPBQ9H078 AC110794.1-201ENST00000505816 425 ntBASIC3.25□□□□□ -1.89
CLPBQ9H078 AC074344.1-201ENST00000512823 224 ntBASIC3.25□□□□□ -1.89
CLPBQ9H078 SNORA31.1-201ENST00000515993 133 ntBASIC3.25□□□□□ -1.89
CLPBQ9H078 SNORA31.5-201ENST00000516190 133 ntBASIC3.25□□□□□ -1.89
CLPBQ9H078 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC3.25□□□□□ -1.89
CLPBQ9H078 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC3.25□□□□□ -1.89
CLPBQ9H078 AC106782.4-201ENST00000568264 210 ntBASIC3.25□□□□□ -1.89
CLPBQ9H078 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC3.25□□□□□ -1.89
CLPBQ9H078 LRRC37A5P-203ENST00000580181 585 ntBASIC3.25□□□□□ -1.89
CLPBQ9H078 MIR3941-201ENST00000582572 103 ntBASIC3.25□□□□□ -1.89
CLPBQ9H078 AL355598.1-201ENST00000604169 202 ntBASIC3.25□□□□□ -1.89
CLPBQ9H078 AC073657.2-201ENST00000605661 303 ntBASIC3.25□□□□□ -1.89
CLPBQ9H078 AC073308.1-201ENST00000623696 305 ntBASIC3.25□□□□□ -1.89
CLPBQ9H078 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC3.25□□□□□ -1.89
CLPBQ9H078 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC3.25□□□□□ -1.89
CLPBQ9H078 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC3.25□□□□□ -1.89
CLPBQ9H078 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC3.25□□□□□ -1.89
CLPBQ9H078 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC3.25□□□□□ -1.89
CLPBQ9H078 MTND4P35-201ENST00000604257 1375 ntBASIC3.25□□□□□ -1.89
CLPBQ9H078 CASC19-280ENST00000642102 1351 ntBASIC3.25□□□□□ -1.89
CLPBQ9H078 AC121333.1-201ENST00000567488 2709 ntBASIC3.24□□□□□ -1.89
CLPBQ9H078 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC3.24□□□□□ -1.89
CLPBQ9H078 MIR412-201ENST00000362142 91 ntBASIC3.24□□□□□ -1.89
CLPBQ9H078 Y_RNA.167-201ENST00000363735 109 ntBASIC3.24□□□□□ -1.89
CLPBQ9H078 OFD1P1Y-201ENST00000411756 1225 ntBASIC3.24□□□□□ -1.89
CLPBQ9H078 AC096664.2-201ENST00000411843 406 ntBASIC3.24□□□□□ -1.89
CLPBQ9H078 RPL26P27-201ENST00000414397 437 ntBASIC3.24□□□□□ -1.89
CLPBQ9H078 BX682237.1-201ENST00000415016 335 ntBASIC3.24□□□□□ -1.89
CLPBQ9H078 AL353621.1-201ENST00000418219 243 ntBASIC3.24□□□□□ -1.89
CLPBQ9H078 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC3.24□□□□□ -1.89
CLPBQ9H078 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC3.24□□□□□ -1.89
CLPBQ9H078 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC3.24□□□□□ -1.89
CLPBQ9H078 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC3.24□□□□□ -1.89
CLPBQ9H078 NDUFB1P2-201ENST00000449477 176 ntBASIC3.24□□□□□ -1.89
CLPBQ9H078 MTATP6P7-201ENST00000453315 681 ntBASIC3.24□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 134.5 ms