Protein–RNA interactions for Protein: Q9BYR4

KRTAP4-3, Keratin-associated protein 4-3, humanhuman

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-3Q9BYR4 RNU6-1004P-201ENST00000516584 111 ntBASIC1.69□□□□□ -2.14
KRTAP4-3Q9BYR4 EDDM3DP-201ENST00000554692 434 ntBASIC1.69□□□□□ -2.14
KRTAP4-3Q9BYR4 MIR5688-201ENST00000580619 83 ntBASIC1.69□□□□□ -2.14
KRTAP4-3Q9BYR4 MIR4777-201ENST00000583710 86 ntBASIC1.69□□□□□ -2.14
KRTAP4-3Q9BYR4 AC005899.1-201ENST00000584125 563 ntTSL 5 BASIC1.69□□□□□ -2.14
KRTAP4-3Q9BYR4 LAMTOR5-AS1-217ENST00000608152 407 ntTSL 5 BASIC1.69□□□□□ -2.14
KRTAP4-3Q9BYR4 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC1.69□□□□□ -2.14
KRTAP4-3Q9BYR4 DEC1-204ENST00000614246 210 ntAPPRIS ALT2 TSL 1 (best) BASIC1.69□□□□□ -2.14
KRTAP4-3Q9BYR4 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC1.69□□□□□ -2.14
KRTAP4-3Q9BYR4 BANCR-201ENST00000624238 473 ntTSL 2 BASIC1.69□□□□□ -2.14
KRTAP4-3Q9BYR4 AC048347.1-201ENST00000624621 427 ntBASIC1.69□□□□□ -2.14
KRTAP4-3Q9BYR4 MIR664A-201ENST00000626086 82 ntBASIC1.69□□□□□ -2.14
KRTAP4-3Q9BYR4 TRPC4-207ENST00000426868 2709 ntTSL 2 BASIC1.69□□□□□ -2.14
KRTAP4-3Q9BYR4 NBPF26-202ENST00000611287 2701 ntTSL 5 BASIC1.69□□□□□ -2.14
KRTAP4-3Q9BYR4 NBPF14-211ENST00000621070 2701 ntTSL 5 BASIC1.69□□□□□ -2.14
KRTAP4-3Q9BYR4 ZNF28-204ENST00000457749 4556 ntAPPRIS P1 TSL 1 (best) BASIC1.69□□□□□ -2.14
KRTAP4-3Q9BYR4 AL158066.1-201ENST00000451298 3796 ntTSL 2 BASIC1.69□□□□□ -2.14
KRTAP4-3Q9BYR4 FAP-203ENST00000443424 2598 ntTSL 2 BASIC1.69□□□□□ -2.14
KRTAP4-3Q9BYR4 G3BP1-202ENST00000394123 10240 ntAPPRIS P1 TSL 1 (best) BASIC1.69□□□□□ -2.14
KRTAP4-3Q9BYR4 TCHHL1-201ENST00000368806 3603 ntAPPRIS P1 TSL 1 (best) BASIC1.69□□□□□ -2.14
KRTAP4-3Q9BYR4 OR56A4-204ENST00000641835 3613 ntAPPRIS P1 BASIC1.69□□□□□ -2.14
KRTAP4-3Q9BYR4 LINC01566-202ENST00000569242 2801 ntTSL 1 (best) BASIC1.69□□□□□ -2.14
KRTAP4-3Q9BYR4 PLCXD3-201ENST00000328457 7538 ntAPPRIS P1 TSL 5 BASIC1.69□□□□□ -2.14
KRTAP4-3Q9BYR4 AGO2-201ENST00000220592 14581 ntAPPRIS P1 TSL 1 (best) BASIC1.69□□□□□ -2.14
KRTAP4-3Q9BYR4 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC1.69□□□□□ -2.14
KRTAP4-3Q9BYR4 RNF19A-205ENST00000519449 4330 ntAPPRIS P1 TSL 1 (best) BASIC1.69□□□□□ -2.14
KRTAP4-3Q9BYR4 ADAM24P-201ENST00000398655 2101 ntBASIC1.69□□□□□ -2.14
KRTAP4-3Q9BYR4 INTS6-220ENST00000497989 3022 ntTSL 2 BASIC1.69□□□□□ -2.14
KRTAP4-3Q9BYR4 OR51H2P-202ENST00000641424 3046 ntBASIC1.69□□□□□ -2.14
KRTAP4-3Q9BYR4 SLC1A3-201ENST00000265113 4170 ntAPPRIS P1 TSL 1 (best) BASIC1.69□□□□□ -2.14
KRTAP4-3Q9BYR4 UTS2B-201ENST00000340524 2395 ntAPPRIS P1 TSL 2 BASIC1.69□□□□□ -2.14
KRTAP4-3Q9BYR4 ZBED6-202ENST00000550078 12481 ntAPPRIS P1 TSL 1 (best) BASIC1.69□□□□□ -2.14
KRTAP4-3Q9BYR4 C3orf67-AS1-202ENST00000482372 2203 ntTSL 2 BASIC1.68□□□□□ -2.14
KRTAP4-3Q9BYR4 LRRC53-201ENST00000294635 3859 ntAPPRIS P1 TSL 5 BASIC1.68□□□□□ -2.14
KRTAP4-3Q9BYR4 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC1.68□□□□□ -2.14
KRTAP4-3Q9BYR4 ZNF521-201ENST00000361524 4871 ntAPPRIS P1 TSL 1 (best) BASIC1.68□□□□□ -2.14
KRTAP4-3Q9BYR4 ZC3H12B-201ENST00000338957 7256 ntAPPRIS P1 TSL 1 (best) BASIC1.68□□□□□ -2.14
KRTAP4-3Q9BYR4 NPSR1-AS1-202ENST00000419766 4821 ntTSL 1 (best) BASIC1.68□□□□□ -2.14
KRTAP4-3Q9BYR4 LINC02141-201ENST00000568279 6586 ntTSL 1 (best) BASIC1.68□□□□□ -2.14
KRTAP4-3Q9BYR4 NCOA3-203ENST00000372004 7939 ntAPPRIS ALT2 TSL 1 (best) BASIC1.68□□□□□ -2.14
KRTAP4-3Q9BYR4 PAN3-202ENST00000399613 4940 ntAPPRIS ALT2 TSL 5 BASIC1.68□□□□□ -2.14
KRTAP4-3Q9BYR4 LINC01249-201ENST00000412134 2663 ntTSL 1 (best) BASIC1.68□□□□□ -2.14
KRTAP4-3Q9BYR4 ENPP2-208ENST00000522826 2667 ntAPPRIS ALT1 TSL 1 (best) BASIC1.68□□□□□ -2.14
KRTAP4-3Q9BYR4 ENPP2-201ENST00000075322 2651 ntAPPRIS ALT1 TSL 1 (best) BASIC1.68□□□□□ -2.14
KRTAP4-3Q9BYR4 MTX3-203ENST00000512560 4799 ntTSL 2 BASIC1.68□□□□□ -2.14
KRTAP4-3Q9BYR4 CCNB3-201ENST00000276014 4513 ntAPPRIS P1 TSL 1 (best) BASIC1.68□□□□□ -2.14
KRTAP4-3Q9BYR4 NFKBIZ-203ENST00000394054 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC1.68□□□□□ -2.14
KRTAP4-3Q9BYR4 AC068870.3-201ENST00000625077 2536 ntBASIC1.68□□□□□ -2.14
KRTAP4-3Q9BYR4 ZNF26-201ENST00000328654 17601 ntAPPRIS P3 TSL 1 (best) BASIC1.68□□□□□ -2.14
KRTAP4-3Q9BYR4 PPARGC1A-201ENST00000264867 6318 ntAPPRIS P1 TSL 1 (best) BASIC1.68□□□□□ -2.14
KRTAP4-3Q9BYR4 FLG-AS1-205ENST00000445097 2857 ntTSL 1 (best) BASIC1.68□□□□□ -2.14
KRTAP4-3Q9BYR4 AL137141.1-201ENST00000624622 4836 ntBASIC1.68□□□□□ -2.14
KRTAP4-3Q9BYR4 PCAT19-201ENST00000588495 3472 ntTSL 1 (best) BASIC1.68□□□□□ -2.14
KRTAP4-3Q9BYR4 FRK-201ENST00000606080 13230 ntAPPRIS P1 TSL 1 (best) BASIC1.68□□□□□ -2.14
KRTAP4-3Q9BYR4 ZNF107-201ENST00000344930 5174 ntTSL 1 (best) BASIC1.68□□□□□ -2.14
KRTAP4-3Q9BYR4 BTLA-201ENST00000334529 3213 ntAPPRIS P3 TSL 1 (best) BASIC1.68□□□□□ -2.14
KRTAP4-3Q9BYR4 AC037459.2-201ENST00000514980 4076 ntTSL 2 BASIC1.68□□□□□ -2.14
KRTAP4-3Q9BYR4 DEFB106A-201ENST00000335186 303 ntAPPRIS P1 TSL 1 (best) BASIC1.68□□□□□ -2.14
KRTAP4-3Q9BYR4 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC1.68□□□□□ -2.14
KRTAP4-3Q9BYR4 RNA5SP453-201ENST00000362503 119 ntBASIC1.68□□□□□ -2.14
KRTAP4-3Q9BYR4 ACEA_U3.1-201ENST00000363057 217 ntBASIC1.68□□□□□ -2.14
KRTAP4-3Q9BYR4 Y_RNA.123-201ENST00000363338 102 ntBASIC1.68□□□□□ -2.14
KRTAP4-3Q9BYR4 SNORD116-10-201ENST00000363791 102 ntBASIC1.68□□□□□ -2.14
KRTAP4-3Q9BYR4 RNU6-478P-201ENST00000363904 110 ntBASIC1.68□□□□□ -2.14
KRTAP4-3Q9BYR4 Y_RNA.287-201ENST00000364853 94 ntBASIC1.68□□□□□ -2.14
KRTAP4-3Q9BYR4 U3.15-201ENST00000365398 212 ntBASIC1.68□□□□□ -2.14
KRTAP4-3Q9BYR4 RNU6-487P-201ENST00000365430 104 ntBASIC1.68□□□□□ -2.14
KRTAP4-3Q9BYR4 Y_RNA.454-201ENST00000384224 113 ntBASIC1.68□□□□□ -2.14
KRTAP4-3Q9BYR4 RNU6-129P-201ENST00000391022 107 ntBASIC1.68□□□□□ -2.14
KRTAP4-3Q9BYR4 RNU6-663P-201ENST00000391105 106 ntBASIC1.68□□□□□ -2.14
KRTAP4-3Q9BYR4 U3.30-201ENST00000391308 210 ntBASIC1.68□□□□□ -2.14
KRTAP4-3Q9BYR4 AL590762.2-201ENST00000395798 571 ntBASIC1.68□□□□□ -2.14
KRTAP4-3Q9BYR4 AL078599.1-201ENST00000402075 293 ntBASIC1.68□□□□□ -2.14
KRTAP4-3Q9BYR4 AL133270.1-201ENST00000402635 279 ntBASIC1.68□□□□□ -2.14
KRTAP4-3Q9BYR4 Y_RNA.622-201ENST00000411091 108 ntBASIC1.68□□□□□ -2.14
KRTAP4-3Q9BYR4 RNU6-1199P-201ENST00000411249 104 ntBASIC1.68□□□□□ -2.14
KRTAP4-3Q9BYR4 AC126124.2-201ENST00000413542 321 ntBASIC1.68□□□□□ -2.14
KRTAP4-3Q9BYR4 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC1.68□□□□□ -2.14
KRTAP4-3Q9BYR4 RPL7AP49-201ENST00000429522 581 ntBASIC1.68□□□□□ -2.14
KRTAP4-3Q9BYR4 AL591438.1-201ENST00000433508 581 ntBASIC1.68□□□□□ -2.14
KRTAP4-3Q9BYR4 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC1.68□□□□□ -2.14
KRTAP4-3Q9BYR4 AL138767.2-201ENST00000446794 168 ntTSL 3 BASIC1.68□□□□□ -2.14
KRTAP4-3Q9BYR4 KNOP1P3-201ENST00000446933 426 ntBASIC1.68□□□□□ -2.14
KRTAP4-3Q9BYR4 AC000111.2-201ENST00000448200 210 ntBASIC1.68□□□□□ -2.14
KRTAP4-3Q9BYR4 AC053481.1-201ENST00000467217 306 ntBASIC1.68□□□□□ -2.14
KRTAP4-3Q9BYR4 RPS27P23-201ENST00000487608 251 ntBASIC1.68□□□□□ -2.14
KRTAP4-3Q9BYR4 SRIP1-201ENST00000489235 288 ntBASIC1.68□□□□□ -2.14
KRTAP4-3Q9BYR4 AC098976.1-201ENST00000513014 541 ntBASIC1.68□□□□□ -2.14
KRTAP4-3Q9BYR4 RNU6-1334P-201ENST00000516032 105 ntBASIC1.68□□□□□ -2.14
KRTAP4-3Q9BYR4 RNU6-581P-201ENST00000516214 105 ntBASIC1.68□□□□□ -2.14
KRTAP4-3Q9BYR4 RNU6-917P-201ENST00000516294 104 ntBASIC1.68□□□□□ -2.14
KRTAP4-3Q9BYR4 RNU6ATAC12P-201ENST00000516542 115 ntBASIC1.68□□□□□ -2.14
KRTAP4-3Q9BYR4 Y_RNA.705-201ENST00000516862 110 ntBASIC1.68□□□□□ -2.14
KRTAP4-3Q9BYR4 RNU4ATAC10P-201ENST00000516967 122 ntBASIC1.68□□□□□ -2.14
KRTAP4-3Q9BYR4 RNU6-448P-201ENST00000517052 107 ntBASIC1.68□□□□□ -2.14
KRTAP4-3Q9BYR4 AC022915.1-201ENST00000521660 289 ntTSL 3 BASIC1.68□□□□□ -2.14
KRTAP4-3Q9BYR4 AC136628.3-201ENST00000521868 290 ntBASIC1.68□□□□□ -2.14
KRTAP4-3Q9BYR4 AC091163.1-201ENST00000524012 605 ntTSL 4 BASIC1.68□□□□□ -2.14
KRTAP4-3Q9BYR4 AL035078.3-201ENST00000525382 241 ntTSL 3 BASIC1.68□□□□□ -2.14
KRTAP4-3Q9BYR4 FAM174B-202ENST00000553393 495 ntTSL 2 BASIC1.68□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 147 ms