Protein–RNA interactions for Protein: Q96RK1

CITED4, Cbp/p300-interacting transactivator 4, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CITED4Q96RK1 ZNF137P-201ENST00000456718 1920 ntBASIC4.31□□□□□ -1.72
CITED4Q96RK1 AL133412.1-201ENST00000380194 2992 ntBASIC4.31□□□□□ -1.72
CITED4Q96RK1 Y_RNA.352-201ENST00000365439 102 ntBASIC4.31□□□□□ -1.72
CITED4Q96RK1 RNU6-198P-201ENST00000384258 104 ntBASIC4.31□□□□□ -1.72
CITED4Q96RK1 U8.10-201ENST00000384260 133 ntBASIC4.31□□□□□ -1.72
CITED4Q96RK1 Y_RNA.462-201ENST00000384268 102 ntBASIC4.31□□□□□ -1.72
CITED4Q96RK1 Y_RNA.581-201ENST00000391017 97 ntBASIC4.31□□□□□ -1.72
CITED4Q96RK1 RNU6-159P-201ENST00000391080 106 ntBASIC4.31□□□□□ -1.72
CITED4Q96RK1 AL645733.1-201ENST00000402250 217 ntBASIC4.31□□□□□ -1.72
CITED4Q96RK1 RNU2-49P-201ENST00000410666 184 ntBASIC4.31□□□□□ -1.72
CITED4Q96RK1 RNU6-1001P-201ENST00000411265 100 ntBASIC4.31□□□□□ -1.72
CITED4Q96RK1 AC009478.1-201ENST00000429816 562 ntTSL 3 BASIC4.31□□□□□ -1.72
CITED4Q96RK1 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC4.31□□□□□ -1.72
CITED4Q96RK1 GAPDHP25-201ENST00000447061 1001 ntBASIC4.31□□□□□ -1.72
CITED4Q96RK1 Z99127.1-202ENST00000448686 526 ntTSL 2 BASIC4.31□□□□□ -1.72
CITED4Q96RK1 AC010099.1-201ENST00000455434 375 ntBASIC4.31□□□□□ -1.72
CITED4Q96RK1 RPS23P6-201ENST00000466136 431 ntBASIC4.31□□□□□ -1.72
CITED4Q96RK1 RPL32P34-201ENST00000486380 400 ntBASIC4.31□□□□□ -1.72
CITED4Q96RK1 AC231760.1-201ENST00000498002 260 ntBASIC4.31□□□□□ -1.72
CITED4Q96RK1 RNU6-138P-201ENST00000515952 107 ntBASIC4.31□□□□□ -1.72
CITED4Q96RK1 AC142086.4-201ENST00000568904 650 ntTSL 3 BASIC4.31□□□□□ -1.72
CITED4Q96RK1 CYCSP40-201ENST00000575927 294 ntBASIC4.31□□□□□ -1.72
CITED4Q96RK1 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC4.31□□□□□ -1.72
CITED4Q96RK1 GMFG-212ENST00000602185 423 ntTSL 3 BASIC4.31□□□□□ -1.72
CITED4Q96RK1 AC091979.2-201ENST00000607514 214 ntBASIC4.31□□□□□ -1.72
CITED4Q96RK1 FAM27D1-201ENST00000612308 341 ntBASIC4.31□□□□□ -1.72
CITED4Q96RK1 AC068831.7-201ENST00000616954 363 ntBASIC4.31□□□□□ -1.72
CITED4Q96RK1 HOTTIP_3.1-201ENST00000619957 337 ntBASIC4.31□□□□□ -1.72
CITED4Q96RK1 AC005086.4-201ENST00000623065 213 ntBASIC4.31□□□□□ -1.72
CITED4Q96RK1 AC023421.1-201ENST00000590535 1785 ntBASIC4.31□□□□□ -1.72
CITED4Q96RK1 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC4.31□□□□□ -1.72
CITED4Q96RK1 SOCS5-201ENST00000306503 4771 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
CITED4Q96RK1 ZNF510-201ENST00000223428 5154 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
CITED4Q96RK1 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
CITED4Q96RK1 ADAM29-214ENST00000618444 2949 ntAPPRIS P1 TSL 4 BASIC4.31□□□□□ -1.72
CITED4Q96RK1 MAP3K19-201ENST00000358371 3719 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
CITED4Q96RK1 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC4.31□□□□□ -1.72
CITED4Q96RK1 SPART-201ENST00000355182 4820 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
CITED4Q96RK1 WAC-221ENST00000628285 2740 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
CITED4Q96RK1 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
CITED4Q96RK1 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
CITED4Q96RK1 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
CITED4Q96RK1 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
CITED4Q96RK1 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC4.3□□□□□ -1.72
CITED4Q96RK1 PNPLA8-204ENST00000426128 4268 ntTSL 5 BASIC4.3□□□□□ -1.72
CITED4Q96RK1 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
CITED4Q96RK1 RNU6-1266P-201ENST00000362794 105 ntBASIC4.3□□□□□ -1.72
CITED4Q96RK1 ACEA_U3.1-201ENST00000363057 217 ntBASIC4.3□□□□□ -1.72
CITED4Q96RK1 WFDC6-202ENST00000372670 620 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
CITED4Q96RK1 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
CITED4Q96RK1 RNU6-209P-201ENST00000384118 107 ntBASIC4.3□□□□□ -1.72
CITED4Q96RK1 RNU6-281P-201ENST00000384212 103 ntBASIC4.3□□□□□ -1.72
CITED4Q96RK1 RNU6-102P-201ENST00000384485 104 ntBASIC4.3□□□□□ -1.72
CITED4Q96RK1 Y_RNA.539-201ENST00000384635 107 ntBASIC4.3□□□□□ -1.72
CITED4Q96RK1 IGLJ6-201ENST00000390328 70 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
CITED4Q96RK1 RNU6-1140P-201ENST00000410517 106 ntBASIC4.3□□□□□ -1.72
CITED4Q96RK1 AC023141.4-201ENST00000412031 328 ntBASIC4.3□□□□□ -1.72
CITED4Q96RK1 AF015720.1-201ENST00000412240 349 ntTSL 3 BASIC4.3□□□□□ -1.72
CITED4Q96RK1 AC012306.1-201ENST00000423267 114 ntBASIC4.3□□□□□ -1.72
CITED4Q96RK1 PTGES3P4-201ENST00000426243 356 ntBASIC4.3□□□□□ -1.72
CITED4Q96RK1 AL358075.3-201ENST00000426289 226 ntBASIC4.3□□□□□ -1.72
CITED4Q96RK1 FOCAD-AS1-201ENST00000439876 359 ntTSL 2 BASIC4.3□□□□□ -1.72
CITED4Q96RK1 AL441985.1-201ENST00000457727 251 ntBASIC4.3□□□□□ -1.72
CITED4Q96RK1 RPS17P15-201ENST00000475609 349 ntBASIC4.3□□□□□ -1.72
CITED4Q96RK1 OR2AO1P-201ENST00000476497 403 ntBASIC4.3□□□□□ -1.72
CITED4Q96RK1 RN7SKP49-201ENST00000516675 260 ntBASIC4.3□□□□□ -1.72
CITED4Q96RK1 RNU7-110P-201ENST00000516891 62 ntBASIC4.3□□□□□ -1.72
CITED4Q96RK1 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
CITED4Q96RK1 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC4.3□□□□□ -1.72
CITED4Q96RK1 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC4.3□□□□□ -1.72
CITED4Q96RK1 MIR1269B-201ENST00000580405 75 ntBASIC4.3□□□□□ -1.72
CITED4Q96RK1 5S_rRNA.16-201ENST00000612928 119 ntBASIC4.3□□□□□ -1.72
CITED4Q96RK1 HOTTIP_4.1-201ENST00000618195 165 ntBASIC4.3□□□□□ -1.72
CITED4Q96RK1 DAOA-212ENST00000640578 378 ntAPPRIS ALT2 TSL 5 BASIC4.3□□□□□ -1.72
CITED4Q96RK1 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC4.3□□□□□ -1.72
CITED4Q96RK1 SRPK2-201ENST00000357311 3700 ntAPPRIS P3 TSL 1 (best) BASIC4.3□□□□□ -1.72
CITED4Q96RK1 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC4.3□□□□□ -1.72
CITED4Q96RK1 IREB2-201ENST00000258886 6354 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
CITED4Q96RK1 LINC02458-201ENST00000500381 2941 ntTSL 2 BASIC4.3□□□□□ -1.72
CITED4Q96RK1 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
CITED4Q96RK1 ADAM29-202ENST00000404450 3171 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
CITED4Q96RK1 SNX10-202ENST00000396376 2491 ntAPPRIS P2 TSL 1 (best) BASIC4.3□□□□□ -1.72
CITED4Q96RK1 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC4.3□□□□□ -1.72
CITED4Q96RK1 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC4.3□□□□□ -1.72
CITED4Q96RK1 AC016588.2-201ENST00000632484 3021 ntBASIC4.29□□□□□ -1.72
CITED4Q96RK1 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC4.29□□□□□ -1.72
CITED4Q96RK1 AC096751.1-201ENST00000515178 2202 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
CITED4Q96RK1 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
CITED4Q96RK1 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
CITED4Q96RK1 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC4.29□□□□□ -1.72
CITED4Q96RK1 R3HCC1L-205ENST00000612478 3337 ntTSL 5 BASIC4.29□□□□□ -1.72
CITED4Q96RK1 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC4.29□□□□□ -1.72
CITED4Q96RK1 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC4.29□□□□□ -1.72
CITED4Q96RK1 SNORA64.1-201ENST00000362600 132 ntBASIC4.29□□□□□ -1.72
CITED4Q96RK1 RNU4-90P-201ENST00000362773 141 ntBASIC4.29□□□□□ -1.72
CITED4Q96RK1 RNU1-20P-201ENST00000363314 162 ntBASIC4.29□□□□□ -1.72
CITED4Q96RK1 RN7SKP124-201ENST00000364730 341 ntBASIC4.29□□□□□ -1.72
CITED4Q96RK1 RNU6-200P-201ENST00000364743 107 ntBASIC4.29□□□□□ -1.72
CITED4Q96RK1 RNU6-622P-201ENST00000384272 103 ntBASIC4.29□□□□□ -1.72
CITED4Q96RK1 SNORA66-201ENST00000384792 133 ntBASIC4.29□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 127.7 ms