Protein–RNA interactions for Protein: Q96PC3

AP1S3, AP-1 complex subunit sigma-3, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3Q96PC3 RPL32P28-201ENST00000443577 397 ntBASIC0.87□□□□□ -2.27
AP1S3Q96PC3 GXYLT1P1-201ENST00000446657 490 ntBASIC0.87□□□□□ -2.27
AP1S3Q96PC3 MTCYBP11-201ENST00000447254 1109 ntBASIC0.87□□□□□ -2.27
AP1S3Q96PC3 TMEM247-203ENST00000449601 741 ntTSL 1 (best) BASIC0.87□□□□□ -2.27
AP1S3Q96PC3 AC092001.1-201ENST00000453012 261 ntBASIC0.87□□□□□ -2.27
AP1S3Q96PC3 OFD1P3Y-201ENST00000453312 783 ntBASIC0.87□□□□□ -2.27
AP1S3Q96PC3 OFD1P7Y-201ENST00000454643 1155 ntBASIC0.87□□□□□ -2.27
AP1S3Q96PC3 RNU6-775P-201ENST00000459318 96 ntBASIC0.87□□□□□ -2.27
AP1S3Q96PC3 MEMO1P3-201ENST00000459811 302 ntBASIC0.87□□□□□ -2.27
AP1S3Q96PC3 RPS26P55-201ENST00000471178 356 ntBASIC0.87□□□□□ -2.27
AP1S3Q96PC3 RPL30P7-201ENST00000479312 323 ntBASIC0.87□□□□□ -2.27
AP1S3Q96PC3 AL133373.1-201ENST00000497098 94 ntBASIC0.87□□□□□ -2.27
AP1S3Q96PC3 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC0.87□□□□□ -2.27
AP1S3Q96PC3 AP003033.1-201ENST00000527244 415 ntBASIC0.87□□□□□ -2.27
AP1S3Q96PC3 ADAM3B-201ENST00000569937 840 ntBASIC0.87□□□□□ -2.27
AP1S3Q96PC3 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC0.87□□□□□ -2.27
AP1S3Q96PC3 MIR3660-201ENST00000584845 100 ntBASIC0.87□□□□□ -2.27
AP1S3Q96PC3 AC012593.1-213ENST00000587255 510 ntTSL 5 BASIC0.87□□□□□ -2.27
AP1S3Q96PC3 AC017037.3-201ENST00000625016 472 ntBASIC0.87□□□□□ -2.27
AP1S3Q96PC3 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC0.87□□□□□ -2.27
AP1S3Q96PC3 SNORA62.1-201ENST00000364287 154 ntBASIC0.86□□□□□ -2.27
AP1S3Q96PC3 RNU4-91P-201ENST00000364778 135 ntBASIC0.86□□□□□ -2.27
AP1S3Q96PC3 RNU6-637P-201ENST00000384050 107 ntBASIC0.86□□□□□ -2.27
AP1S3Q96PC3 RNU6-658P-201ENST00000384606 106 ntBASIC0.86□□□□□ -2.27
AP1S3Q96PC3 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC0.86□□□□□ -2.27
AP1S3Q96PC3 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC0.86□□□□□ -2.27
AP1S3Q96PC3 RNU2-68P-201ENST00000410878 191 ntBASIC0.86□□□□□ -2.27
AP1S3Q96PC3 UBE2V2P3-201ENST00000433562 437 ntBASIC0.86□□□□□ -2.27
AP1S3Q96PC3 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC0.86□□□□□ -2.27
AP1S3Q96PC3 RPS15AP9-201ENST00000439856 381 ntBASIC0.86□□□□□ -2.27
AP1S3Q96PC3 BX322784.1-201ENST00000455793 1077 ntBASIC0.86□□□□□ -2.27
AP1S3Q96PC3 APOA2-205ENST00000468465 421 ntTSL 2 BASIC0.86□□□□□ -2.27
AP1S3Q96PC3 AC108935.1-201ENST00000504874 518 ntTSL 2 BASIC0.86□□□□□ -2.27
AP1S3Q96PC3 AKIRIN2P1-201ENST00000505898 352 ntBASIC0.86□□□□□ -2.27
AP1S3Q96PC3 AC097467.3-213ENST00000508191 726 ntTSL 3 BASIC0.86□□□□□ -2.27
AP1S3Q96PC3 AC008628.1-201ENST00000508663 265 ntBASIC0.86□□□□□ -2.27
AP1S3Q96PC3 AC025465.3-201ENST00000510570 311 ntBASIC0.86□□□□□ -2.27
AP1S3Q96PC3 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC0.86□□□□□ -2.27
AP1S3Q96PC3 RNU6-551P-201ENST00000516661 103 ntBASIC0.86□□□□□ -2.27
AP1S3Q96PC3 AP003122.4-201ENST00000530980 758 ntBASIC0.86□□□□□ -2.27
AP1S3Q96PC3 AL118556.1-201ENST00000555257 502 ntTSL 2 BASIC0.86□□□□□ -2.27
AP1S3Q96PC3 AL442163.1-201ENST00000557251 515 ntTSL 5 BASIC0.86□□□□□ -2.27
AP1S3Q96PC3 SNORA77B-201ENST00000578179 125 ntBASIC0.86□□□□□ -2.27
AP1S3Q96PC3 MIR4666A-201ENST00000580160 79 ntBASIC0.86□□□□□ -2.27
AP1S3Q96PC3 AL355598.1-201ENST00000604169 202 ntBASIC0.86□□□□□ -2.27
AP1S3Q96PC3 AC008759.3-201ENST00000613300 508 ntBASIC0.86□□□□□ -2.27
AP1S3Q96PC3 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC0.86□□□□□ -2.27
AP1S3Q96PC3 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC0.85□□□□□ -2.27
AP1S3Q96PC3 RNU6-1066P-201ENST00000363573 105 ntBASIC0.85□□□□□ -2.27
AP1S3Q96PC3 Y_RNA.234-201ENST00000364409 97 ntBASIC0.85□□□□□ -2.27
AP1S3Q96PC3 RN7SKP284-201ENST00000411002 343 ntBASIC0.85□□□□□ -2.27
AP1S3Q96PC3 TOMM20P4-201ENST00000427861 435 ntBASIC0.85□□□□□ -2.27
AP1S3Q96PC3 AC092634.2-201ENST00000428146 1010 ntBASIC0.85□□□□□ -2.27
AP1S3Q96PC3 HMGB1P27-201ENST00000431429 603 ntBASIC0.85□□□□□ -2.27
AP1S3Q96PC3 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC0.85□□□□□ -2.27
AP1S3Q96PC3 CR769776.1-201ENST00000441254 787 ntBASIC0.85□□□□□ -2.27
AP1S3Q96PC3 PRELID3BP1-201ENST00000457142 540 ntBASIC0.85□□□□□ -2.27
AP1S3Q96PC3 AL441985.1-201ENST00000457727 251 ntBASIC0.85□□□□□ -2.27
AP1S3Q96PC3 AC013267.1-201ENST00000458227 267 ntBASIC0.85□□□□□ -2.27
AP1S3Q96PC3 RPL36AP21-201ENST00000490372 323 ntBASIC0.85□□□□□ -2.27
AP1S3Q96PC3 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC0.85□□□□□ -2.27
AP1S3Q96PC3 RNU1-41P-201ENST00000516161 162 ntBASIC0.85□□□□□ -2.27
AP1S3Q96PC3 RNU1-48P-201ENST00000516400 162 ntBASIC0.85□□□□□ -2.27
AP1S3Q96PC3 LINC00944-203ENST00000542248 548 ntTSL 4 BASIC0.85□□□□□ -2.27
AP1S3Q96PC3 ZKSCAN7P1-201ENST00000543668 673 ntBASIC0.85□□□□□ -2.27
AP1S3Q96PC3 AC090049.1-201ENST00000551075 1011 ntTSL 3 BASIC0.85□□□□□ -2.27
AP1S3Q96PC3 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC0.85□□□□□ -2.27
AP1S3Q96PC3 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC0.85□□□□□ -2.27
AP1S3Q96PC3 USP12-203ENST00000620323 349 ntTSL 3 BASIC0.85□□□□□ -2.27
AP1S3Q96PC3 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC0.85□□□□□ -2.27
AP1S3Q96PC3 MTND5P9-201ENST00000503854 1755 ntBASIC0.85□□□□□ -2.27
AP1S3Q96PC3 SNORA70.7-201ENST00000384159 133 ntBASIC0.84□□□□□ -2.27
AP1S3Q96PC3 RNU6-611P-201ENST00000384276 104 ntBASIC0.84□□□□□ -2.27
AP1S3Q96PC3 MIR1302-8-201ENST00000408342 128 ntBASIC0.84□□□□□ -2.27
AP1S3Q96PC3 RNU4-27P-201ENST00000410889 139 ntBASIC0.84□□□□□ -2.27
AP1S3Q96PC3 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC0.84□□□□□ -2.27
AP1S3Q96PC3 AC027644.1-201ENST00000419595 298 ntBASIC0.84□□□□□ -2.27
AP1S3Q96PC3 CYCSP49-201ENST00000420810 319 ntBASIC0.84□□□□□ -2.27
AP1S3Q96PC3 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC0.84□□□□□ -2.27
AP1S3Q96PC3 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC0.84□□□□□ -2.27
AP1S3Q96PC3 MTND5P25-201ENST00000430499 799 ntBASIC0.84□□□□□ -2.27
AP1S3Q96PC3 AL135790.2-201ENST00000437701 267 ntBASIC0.84□□□□□ -2.27
AP1S3Q96PC3 OR6C5P-201ENST00000452388 923 ntBASIC0.84□□□□□ -2.27
AP1S3Q96PC3 RPL7P43-201ENST00000478876 753 ntBASIC0.84□□□□□ -2.27
AP1S3Q96PC3 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC0.84□□□□□ -2.27
AP1S3Q96PC3 RNVU1-2-201ENST00000516326 135 ntBASIC0.84□□□□□ -2.27
AP1S3Q96PC3 RNU6-548P-201ENST00000517083 115 ntBASIC0.84□□□□□ -2.27
AP1S3Q96PC3 AC022861.1-201ENST00000522981 663 ntBASIC0.84□□□□□ -2.27
AP1S3Q96PC3 AC002400.1-201ENST00000569310 726 ntBASIC0.84□□□□□ -2.27
AP1S3Q96PC3 AC090615.1-201ENST00000577519 154 ntBASIC0.84□□□□□ -2.27
AP1S3Q96PC3 MIR4637-201ENST00000582405 84 ntBASIC0.84□□□□□ -2.27
AP1S3Q96PC3 CYP2C61P-201ENST00000604072 290 ntBASIC0.84□□□□□ -2.27
AP1S3Q96PC3 AC073413.2-201ENST00000604332 360 ntBASIC0.84□□□□□ -2.27
AP1S3Q96PC3 BNIP3P19-201ENST00000605397 577 ntBASIC0.84□□□□□ -2.27
AP1S3Q96PC3 AL132822.1-201ENST00000617063 513 ntBASIC0.84□□□□□ -2.27
AP1S3Q96PC3 AL121890.5-201ENST00000620848 304 ntBASIC0.84□□□□□ -2.27
AP1S3Q96PC3 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC0.84□□□□□ -2.27
AP1S3Q96PC3 NF1-214ENST00000490416 1329 ntTSL 3 BASIC0.84□□□□□ -2.28
AP1S3Q96PC3 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC0.83□□□□□ -2.28
AP1S3Q96PC3 DEFB133-201ENST00000398721 186 ntAPPRIS P1 TSL 1 (best) BASIC0.83□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 111.9 ms