Protein–RNA interactions for Protein: Q96LX7

CCDC17, Coiled-coil domain-containing protein 17, humanhuman

Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC17Q96LX7 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC3.55□□□□□ -1.84
CCDC17Q96LX7 SCARNA15.3-201ENST00000626315 122 ntBASIC3.55□□□□□ -1.84
CCDC17Q96LX7 SCARNA4.1-201ENST00000628597 123 ntBASIC3.55□□□□□ -1.84
CCDC17Q96LX7 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.55□□□□□ -1.84
CCDC17Q96LX7 AC103710.2-202ENST00000641454 2853 ntBASIC3.55□□□□□ -1.84
CCDC17Q96LX7 AC010733.2-201ENST00000589496 5702 ntBASIC3.55□□□□□ -1.84
CCDC17Q96LX7 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.55□□□□□ -1.84
CCDC17Q96LX7 AC091152.2-201ENST00000591628 2569 ntBASIC3.55□□□□□ -1.84
CCDC17Q96LX7 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC3.54□□□□□ -1.84
CCDC17Q96LX7 AL137003.2-201ENST00000606924 2538 ntBASIC3.54□□□□□ -1.84
CCDC17Q96LX7 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
CCDC17Q96LX7 AL353746.1-201ENST00000566293 6881 ntBASIC3.54□□□□□ -1.84
CCDC17Q96LX7 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC3.54□□□□□ -1.84
CCDC17Q96LX7 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
CCDC17Q96LX7 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
CCDC17Q96LX7 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
CCDC17Q96LX7 RNU6-288P-201ENST00000363690 104 ntBASIC3.54□□□□□ -1.84
CCDC17Q96LX7 RNU6-7-201ENST00000364784 107 ntBASIC3.54□□□□□ -1.84
CCDC17Q96LX7 RNU6-8-201ENST00000365467 107 ntBASIC3.54□□□□□ -1.84
CCDC17Q96LX7 RNU4-46P-201ENST00000410818 138 ntBASIC3.54□□□□□ -1.84
CCDC17Q96LX7 RNU6-387P-201ENST00000411331 105 ntBASIC3.54□□□□□ -1.84
CCDC17Q96LX7 AC022018.1-201ENST00000430685 241 ntBASIC3.54□□□□□ -1.84
CCDC17Q96LX7 HMGB3P8-201ENST00000449709 577 ntBASIC3.54□□□□□ -1.84
CCDC17Q96LX7 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC3.54□□□□□ -1.84
CCDC17Q96LX7 AC004801.2-202ENST00000463559 283 ntBASIC3.54□□□□□ -1.84
CCDC17Q96LX7 MTND4P17-201ENST00000470444 350 ntBASIC3.54□□□□□ -1.84
CCDC17Q96LX7 RPL7P43-201ENST00000478876 753 ntBASIC3.54□□□□□ -1.84
CCDC17Q96LX7 Y_RNA.654-201ENST00000497848 106 ntBASIC3.54□□□□□ -1.84
CCDC17Q96LX7 AC083906.5-201ENST00000503722 328 ntBASIC3.54□□□□□ -1.84
CCDC17Q96LX7 HMGN1P13-201ENST00000505795 138 ntBASIC3.54□□□□□ -1.84
CCDC17Q96LX7 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC3.54□□□□□ -1.84
CCDC17Q96LX7 SNORA31.3-201ENST00000516029 96 ntBASIC3.54□□□□□ -1.84
CCDC17Q96LX7 RN7SKP258-201ENST00000517151 304 ntBASIC3.54□□□□□ -1.84
CCDC17Q96LX7 AC090136.1-201ENST00000520009 240 ntBASIC3.54□□□□□ -1.84
CCDC17Q96LX7 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC3.54□□□□□ -1.84
CCDC17Q96LX7 AP004242.1-201ENST00000533701 349 ntBASIC3.54□□□□□ -1.84
CCDC17Q96LX7 AC107016.2-201ENST00000547968 190 ntBASIC3.54□□□□□ -1.84
CCDC17Q96LX7 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC3.54□□□□□ -1.84
CCDC17Q96LX7 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC3.54□□□□□ -1.84
CCDC17Q96LX7 FAM60BP-201ENST00000578364 658 ntBASIC3.54□□□□□ -1.84
CCDC17Q96LX7 SNRPGP15-201ENST00000600149 222 ntBASIC3.54□□□□□ -1.84
CCDC17Q96LX7 AC104763.2-201ENST00000604179 382 ntBASIC3.54□□□□□ -1.84
CCDC17Q96LX7 AL670379.10-201ENST00000604330 253 ntBASIC3.54□□□□□ -1.84
CCDC17Q96LX7 AL670379.9-201ENST00000605428 253 ntBASIC3.54□□□□□ -1.84
CCDC17Q96LX7 AC090574.1-201ENST00000623186 233 ntBASIC3.54□□□□□ -1.84
CCDC17Q96LX7 AP003400.5-201ENST00000624827 617 ntBASIC3.54□□□□□ -1.84
CCDC17Q96LX7 VPS8-228ENST00000628962 207 ntTSL 5 BASIC3.54□□□□□ -1.84
CCDC17Q96LX7 AL137790.1-201ENST00000634283 177 ntBASIC3.54□□□□□ -1.84
CCDC17Q96LX7 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
CCDC17Q96LX7 HSPA8P4-201ENST00000511877 1920 ntBASIC3.54□□□□□ -1.84
CCDC17Q96LX7 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC3.53□□□□□ -1.84
CCDC17Q96LX7 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC3.53□□□□□ -1.84
CCDC17Q96LX7 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC3.53□□□□□ -1.84
CCDC17Q96LX7 AL035425.3-201ENST00000564206 4996 ntBASIC3.53□□□□□ -1.84
CCDC17Q96LX7 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC3.53□□□□□ -1.84
CCDC17Q96LX7 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC3.53□□□□□ -1.84
CCDC17Q96LX7 AL021368.2-201ENST00000606125 5352 ntBASIC3.53□□□□□ -1.84
CCDC17Q96LX7 RNU6-1252P-201ENST00000363054 104 ntBASIC3.53□□□□□ -1.84
CCDC17Q96LX7 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
CCDC17Q96LX7 Y_RNA.414-201ENST00000384011 101 ntBASIC3.53□□□□□ -1.84
CCDC17Q96LX7 Y_RNA.530-201ENST00000384587 101 ntBASIC3.53□□□□□ -1.84
CCDC17Q96LX7 AL139039.1-201ENST00000401900 692 ntBASIC3.53□□□□□ -1.84
CCDC17Q96LX7 POLHP1-201ENST00000411806 470 ntBASIC3.53□□□□□ -1.84
CCDC17Q96LX7 EEF1A1P41-201ENST00000414667 207 ntBASIC3.53□□□□□ -1.84
CCDC17Q96LX7 AL139132.1-201ENST00000431587 344 ntBASIC3.53□□□□□ -1.84
CCDC17Q96LX7 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC3.53□□□□□ -1.84
CCDC17Q96LX7 AL121871.1-201ENST00000443413 436 ntBASIC3.53□□□□□ -1.84
CCDC17Q96LX7 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC3.53□□□□□ -1.84
CCDC17Q96LX7 AC096576.1-201ENST00000489014 359 ntBASIC3.53□□□□□ -1.84
CCDC17Q96LX7 AC078918.1-201ENST00000498515 228 ntBASIC3.53□□□□□ -1.84
CCDC17Q96LX7 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC3.53□□□□□ -1.84
CCDC17Q96LX7 AC009901.1-201ENST00000506703 541 ntBASIC3.53□□□□□ -1.84
CCDC17Q96LX7 SNORA19.2-201ENST00000516013 114 ntBASIC3.53□□□□□ -1.84
CCDC17Q96LX7 RNU6-864P-201ENST00000516256 108 ntBASIC3.53□□□□□ -1.84
CCDC17Q96LX7 SNORA64.4-201ENST00000516632 81 ntBASIC3.53□□□□□ -1.84
CCDC17Q96LX7 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC3.53□□□□□ -1.84
CCDC17Q96LX7 AP004371.1-201ENST00000525240 214 ntBASIC3.53□□□□□ -1.84
CCDC17Q96LX7 AP000889.1-201ENST00000530968 660 ntBASIC3.53□□□□□ -1.84
CCDC17Q96LX7 RANP3-201ENST00000530970 276 ntBASIC3.53□□□□□ -1.84
CCDC17Q96LX7 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC3.53□□□□□ -1.84
CCDC17Q96LX7 AC005668.1-201ENST00000571142 476 ntBASIC3.53□□□□□ -1.84
CCDC17Q96LX7 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC3.53□□□□□ -1.84
CCDC17Q96LX7 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC3.53□□□□□ -1.84
CCDC17Q96LX7 AC113139.1-201ENST00000605049 239 ntBASIC3.53□□□□□ -1.84
CCDC17Q96LX7 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC3.53□□□□□ -1.84
CCDC17Q96LX7 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
CCDC17Q96LX7 uc_338.15-201ENST00000615470 191 ntBASIC3.53□□□□□ -1.84
CCDC17Q96LX7 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC3.53□□□□□ -1.84
CCDC17Q96LX7 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC3.53□□□□□ -1.84
CCDC17Q96LX7 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC3.52□□□□□ -1.85
CCDC17Q96LX7 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC3.52□□□□□ -1.85
CCDC17Q96LX7 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC3.52□□□□□ -1.85
CCDC17Q96LX7 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC3.52□□□□□ -1.85
CCDC17Q96LX7 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.52□□□□□ -1.85
CCDC17Q96LX7 RNA5SP383-201ENST00000362934 120 ntBASIC3.52□□□□□ -1.85
CCDC17Q96LX7 RNU6-82P-201ENST00000363970 107 ntBASIC3.52□□□□□ -1.85
CCDC17Q96LX7 Y_RNA.460-201ENST00000384255 102 ntBASIC3.52□□□□□ -1.85
CCDC17Q96LX7 SNORA16.2-201ENST00000390991 127 ntBASIC3.52□□□□□ -1.85
CCDC17Q96LX7 SNORD70.1-201ENST00000391007 85 ntBASIC3.52□□□□□ -1.85
CCDC17Q96LX7 CISD1P1-201ENST00000393907 327 ntBASIC3.52□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 107.9 ms