Protein–RNA interactions for Protein: Q96L12

CALR3, Calreticulin-3, humanhuman

Known RBP Predictions only

Length 384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CALR3Q96L12 RPL23AP25-201ENST00000430973 463 ntBASIC4.97□□□□□ -1.61
CALR3Q96L12 AC005828.1-201ENST00000431604 524 ntTSL 5 BASIC4.97□□□□□ -1.61
CALR3Q96L12 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC4.97□□□□□ -1.61
CALR3Q96L12 AC087477.1-201ENST00000465747 340 ntBASIC4.97□□□□□ -1.61
CALR3Q96L12 MED28P2-201ENST00000475771 317 ntBASIC4.97□□□□□ -1.61
CALR3Q96L12 AC098869.1-201ENST00000481627 292 ntBASIC4.97□□□□□ -1.61
CALR3Q96L12 AF213884.1-201ENST00000488102 463 ntBASIC4.97□□□□□ -1.61
CALR3Q96L12 AF186996.7-201ENST00000492781 209 ntBASIC4.97□□□□□ -1.61
CALR3Q96L12 RN7SKP66-201ENST00000516681 231 ntBASIC4.97□□□□□ -1.61
CALR3Q96L12 SNORA31.23-201ENST00000517219 133 ntBASIC4.97□□□□□ -1.61
CALR3Q96L12 IGKV2-23-201ENST00000518729 323 ntBASIC4.97□□□□□ -1.61
CALR3Q96L12 AC133555.2-201ENST00000550213 292 ntBASIC4.97□□□□□ -1.61
CALR3Q96L12 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC4.97□□□□□ -1.61
CALR3Q96L12 AC009163.5-201ENST00000575421 637 ntBASIC4.97□□□□□ -1.61
CALR3Q96L12 AL391358.1-201ENST00000605342 190 ntBASIC4.97□□□□□ -1.61
CALR3Q96L12 AC141273.2-201ENST00000618989 130 ntBASIC4.97□□□□□ -1.61
CALR3Q96L12 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC4.97□□□□□ -1.61
CALR3Q96L12 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
CALR3Q96L12 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC4.97□□□□□ -1.61
CALR3Q96L12 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
CALR3Q96L12 ADNP-201ENST00000349014 5963 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
CALR3Q96L12 C5orf63-205ENST00000535381 5680 ntTSL 3 BASIC4.97□□□□□ -1.61
CALR3Q96L12 ADAM29-214ENST00000618444 2949 ntAPPRIS P1 TSL 4 BASIC4.96□□□□□ -1.61
CALR3Q96L12 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC4.96□□□□□ -1.61
CALR3Q96L12 SYTL2-217ENST00000528231 3536 ntAPPRIS ALT1 TSL 1 (best) BASIC4.96□□□□□ -1.62
CALR3Q96L12 NFIB-203ENST00000380934 2142 ntTSL 2 BASIC4.96□□□□□ -1.62
CALR3Q96L12 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
CALR3Q96L12 ADGRL3-215ENST00000512091 12636 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
CALR3Q96L12 GABRG2-210ENST00000638772 7669 ntTSL 5 BASIC4.96□□□□□ -1.62
CALR3Q96L12 RNU6-222P-201ENST00000362438 107 ntBASIC4.96□□□□□ -1.62
CALR3Q96L12 RNU6-1301P-201ENST00000362724 104 ntBASIC4.96□□□□□ -1.62
CALR3Q96L12 Y_RNA.60-201ENST00000362831 98 ntBASIC4.96□□□□□ -1.62
CALR3Q96L12 C1orf54-201ENST00000369098 418 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
CALR3Q96L12 RFX3-203ENST00000381984 364 ntTSL 3 BASIC4.96□□□□□ -1.62
CALR3Q96L12 Y_RNA.478-201ENST00000384358 107 ntBASIC4.96□□□□□ -1.62
CALR3Q96L12 SNORD115-46-201ENST00000390982 71 ntBASIC4.96□□□□□ -1.62
CALR3Q96L12 SNORD78.2-201ENST00000391076 69 ntBASIC4.96□□□□□ -1.62
CALR3Q96L12 U3.30-201ENST00000391308 210 ntBASIC4.96□□□□□ -1.62
CALR3Q96L12 AL391361.1-201ENST00000405580 489 ntBASIC4.96□□□□□ -1.62
CALR3Q96L12 AC011742.1-201ENST00000431448 434 ntBASIC4.96□□□□□ -1.62
CALR3Q96L12 AC012308.1-201ENST00000451232 178 ntBASIC4.96□□□□□ -1.62
CALR3Q96L12 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC4.96□□□□□ -1.62
CALR3Q96L12 AC092440.1-201ENST00000512563 571 ntTSL 4 BASIC4.96□□□□□ -1.62
CALR3Q96L12 RNA5SP446-201ENST00000515955 82 ntBASIC4.96□□□□□ -1.62
CALR3Q96L12 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC4.96□□□□□ -1.62
CALR3Q96L12 IGKV3D-34-201ENST00000522638 302 ntBASIC4.96□□□□□ -1.62
CALR3Q96L12 AC091163.1-201ENST00000524012 605 ntTSL 4 BASIC4.96□□□□□ -1.62
CALR3Q96L12 AC091178.1-203ENST00000584586 279 ntBASIC4.96□□□□□ -1.62
CALR3Q96L12 AC073410.2-201ENST00000603240 332 ntBASIC4.96□□□□□ -1.62
CALR3Q96L12 MIR376A1-201ENST00000616574 68 ntBASIC4.96□□□□□ -1.62
CALR3Q96L12 MIR6076-201ENST00000617521 113 ntBASIC4.96□□□□□ -1.62
CALR3Q96L12 MIR3529-201ENST00000637713 78 ntBASIC4.96□□□□□ -1.62
CALR3Q96L12 LINC01847-201ENST00000522627 5607 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
CALR3Q96L12 AC106871.1-201ENST00000568324 3102 ntBASIC4.96□□□□□ -1.62
CALR3Q96L12 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC4.95□□□□□ -1.62
CALR3Q96L12 MAP3K19-201ENST00000358371 3719 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
CALR3Q96L12 LINC02555-201ENST00000563933 1951 ntBASIC4.95□□□□□ -1.62
CALR3Q96L12 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC4.95□□□□□ -1.62
CALR3Q96L12 PCDH15-211ENST00000395440 3177 ntTSL 5 BASIC4.95□□□□□ -1.62
CALR3Q96L12 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC4.95□□□□□ -1.62
CALR3Q96L12 SEC31A-237ENST00000513858 3687 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
CALR3Q96L12 XIRP2-207ENST00000628543 12182 ntTSL 5 BASIC4.95□□□□□ -1.62
CALR3Q96L12 Y_RNA.84-201ENST00000363011 104 ntBASIC4.95□□□□□ -1.62
CALR3Q96L12 Y_RNA.477-201ENST00000384352 108 ntBASIC4.95□□□□□ -1.62
CALR3Q96L12 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
CALR3Q96L12 Z98745.1-201ENST00000402553 494 ntBASIC4.95□□□□□ -1.62
CALR3Q96L12 RN7SKP267-201ENST00000410381 285 ntBASIC4.95□□□□□ -1.62
CALR3Q96L12 RNU6-1203P-201ENST00000410703 110 ntBASIC4.95□□□□□ -1.62
CALR3Q96L12 RAC1P3-201ENST00000416129 580 ntBASIC4.95□□□□□ -1.62
CALR3Q96L12 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC4.95□□□□□ -1.62
CALR3Q96L12 RNU6-1012P-201ENST00000516606 109 ntBASIC4.95□□□□□ -1.62
CALR3Q96L12 AC007375.1-201ENST00000554513 578 ntBASIC4.95□□□□□ -1.62
CALR3Q96L12 SUMO2P15-201ENST00000604285 278 ntBASIC4.95□□□□□ -1.62
CALR3Q96L12 HSPE1P7-201ENST00000604681 321 ntBASIC4.95□□□□□ -1.62
CALR3Q96L12 AL590392.1-201ENST00000604960 446 ntBASIC4.95□□□□□ -1.62
CALR3Q96L12 FAM27B-201ENST00000610601 213 ntBASIC4.95□□□□□ -1.62
CALR3Q96L12 MIR6768-201ENST00000610734 72 ntBASIC4.95□□□□□ -1.62
CALR3Q96L12 CENPF-206ENST00000614578 528 ntTSL 5 BASIC4.95□□□□□ -1.62
CALR3Q96L12 AC240442.1-201ENST00000616055 283 ntBASIC4.95□□□□□ -1.62
CALR3Q96L12 AC137590.2-201ENST00000619709 240 ntBASIC4.95□□□□□ -1.62
CALR3Q96L12 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC4.95□□□□□ -1.62
CALR3Q96L12 SNORA43.4-201ENST00000629559 138 ntBASIC4.95□□□□□ -1.62
CALR3Q96L12 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC4.95□□□□□ -1.62
CALR3Q96L12 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC4.95□□□□□ -1.62
CALR3Q96L12 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC4.95□□□□□ -1.62
CALR3Q96L12 HAUS6P2-201ENST00000433254 2404 ntBASIC4.95□□□□□ -1.62
CALR3Q96L12 AP5M1-201ENST00000261558 11737 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
CALR3Q96L12 KIAA0586-202ENST00000354386 5226 ntAPPRIS ALT2 TSL 2 BASIC4.94□□□□□ -1.62
CALR3Q96L12 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
CALR3Q96L12 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC4.94□□□□□ -1.62
CALR3Q96L12 RNU6-1141P-201ENST00000364520 107 ntBASIC4.94□□□□□ -1.62
CALR3Q96L12 Y_RNA.504-201ENST00000384481 104 ntBASIC4.94□□□□□ -1.62
CALR3Q96L12 MIR3074-201ENST00000384885 81 ntBASIC4.94□□□□□ -1.62
CALR3Q96L12 SDHCP2-201ENST00000398565 501 ntBASIC4.94□□□□□ -1.62
CALR3Q96L12 MTHFD2P2-201ENST00000407725 247 ntBASIC4.94□□□□□ -1.62
CALR3Q96L12 AC079790.1-201ENST00000420365 507 ntTSL 3 BASIC4.94□□□□□ -1.62
CALR3Q96L12 RPL23AP82-202ENST00000427528 469 ntBASIC4.94□□□□□ -1.62
CALR3Q96L12 AL590664.1-201ENST00000448065 339 ntBASIC4.94□□□□□ -1.62
CALR3Q96L12 MTND4LP30-201ENST00000454092 297 ntBASIC4.94□□□□□ -1.62
CALR3Q96L12 SNRPGP7-201ENST00000469016 106 ntBASIC4.94□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 124.9 ms