Protein–RNA interactions for Protein: Q96II8

LRCH3, Leucine-rich repeat and calponin homology domain-containing protein 3, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3Q96II8 AC010329.5-201ENST00000623497 2174 ntBASIC5.42□□□□□ -1.54
LRCH3Q96II8 MTX3-204ENST00000617335 6155 ntTSL 2 BASIC5.42□□□□□ -1.54
LRCH3Q96II8 CDON-206ENST00000531738 5803 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
LRCH3Q96II8 AL034549.2-201ENST00000618285 3373 ntBASIC5.42□□□□□ -1.54
LRCH3Q96II8 NRXN1-242ENST00000635519 3553 ntTSL 5 BASIC5.42□□□□□ -1.54
LRCH3Q96II8 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC5.42□□□□□ -1.54
LRCH3Q96II8 RNU6-1048P-201ENST00000364054 107 ntBASIC5.42□□□□□ -1.54
LRCH3Q96II8 RNU6-1310P-201ENST00000384153 107 ntBASIC5.42□□□□□ -1.54
LRCH3Q96II8 SNORA75.5-201ENST00000391291 81 ntBASIC5.42□□□□□ -1.54
LRCH3Q96II8 AL590762.2-201ENST00000395798 571 ntBASIC5.42□□□□□ -1.54
LRCH3Q96II8 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC5.42□□□□□ -1.54
LRCH3Q96II8 NDUFB4P8-201ENST00000435351 367 ntBASIC5.42□□□□□ -1.54
LRCH3Q96II8 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
LRCH3Q96II8 Z73495.1-201ENST00000444982 147 ntTSL 3 BASIC5.42□□□□□ -1.54
LRCH3Q96II8 GEMIN8P3-201ENST00000445417 720 ntBASIC5.42□□□□□ -1.54
LRCH3Q96II8 PHBP16-201ENST00000446318 950 ntBASIC5.42□□□□□ -1.54
LRCH3Q96II8 AC146507.2-201ENST00000460608 476 ntBASIC5.42□□□□□ -1.54
LRCH3Q96II8 ENPP7P9-201ENST00000514456 627 ntBASIC5.42□□□□□ -1.54
LRCH3Q96II8 AC107016.1-201ENST00000550463 337 ntBASIC5.42□□□□□ -1.54
LRCH3Q96II8 NEK3-211ENST00000629912 141 ntTSL 5 BASIC5.42□□□□□ -1.54
LRCH3Q96II8 SLITRK4-202ENST00000356928 3074 ntAPPRIS P1 TSL 2 BASIC5.42□□□□□ -1.54
LRCH3Q96II8 SLMAP-206ENST00000428312 4132 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
LRCH3Q96II8 LINC01541-202ENST00000568095 3105 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
LRCH3Q96II8 AGO2-201ENST00000220592 14581 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
LRCH3Q96II8 ARFGEF2-201ENST00000371917 8852 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
LRCH3Q96II8 DYRK1A-202ENST00000339659 8654 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
LRCH3Q96II8 NR2C2-213ENST00000617312 8113 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
LRCH3Q96II8 AC083899.1-201ENST00000454465 3819 ntBASIC5.42□□□□□ -1.54
LRCH3Q96II8 ZNF81-202ENST00000338637 7859 ntAPPRIS P1 TSL 3 BASIC5.41□□□□□ -1.54
LRCH3Q96II8 RFFL-202ENST00000394597 4227 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
LRCH3Q96II8 MLH3-210ENST00000556257 4229 ntTSL 5 BASIC5.41□□□□□ -1.54
LRCH3Q96II8 USP26-203ENST00000511190 3665 ntAPPRIS P1 TSL 2 BASIC5.41□□□□□ -1.54
LRCH3Q96II8 ZNF567-203ENST00000585696 3734 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
LRCH3Q96II8 SNORA71.3-201ENST00000362582 128 ntBASIC5.41□□□□□ -1.54
LRCH3Q96II8 Y_RNA.179-201ENST00000363844 90 ntBASIC5.41□□□□□ -1.54
LRCH3Q96II8 Y_RNA.287-201ENST00000364853 94 ntBASIC5.41□□□□□ -1.54
LRCH3Q96II8 MIR548A3-201ENST00000385297 97 ntBASIC5.41□□□□□ -1.54
LRCH3Q96II8 MT-TT-201ENST00000387460 66 ntBASIC5.41□□□□□ -1.54
LRCH3Q96II8 RNA5SP372-201ENST00000390836 115 ntBASIC5.41□□□□□ -1.54
LRCH3Q96II8 RN7SKP53-201ENST00000411337 315 ntBASIC5.41□□□□□ -1.54
LRCH3Q96II8 AC098614.2-201ENST00000426040 255 ntBASIC5.41□□□□□ -1.54
LRCH3Q96II8 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC5.41□□□□□ -1.54
LRCH3Q96II8 snoU13.6-201ENST00000458785 104 ntBASIC5.41□□□□□ -1.54
LRCH3Q96II8 AC026726.1-201ENST00000512859 601 ntBASIC5.41□□□□□ -1.54
LRCH3Q96II8 RN7SKP234-201ENST00000517173 224 ntBASIC5.41□□□□□ -1.54
LRCH3Q96II8 RNU1-45P-201ENST00000517191 141 ntBASIC5.41□□□□□ -1.54
LRCH3Q96II8 RPL23AP53-201ENST00000521854 457 ntBASIC5.41□□□□□ -1.54
LRCH3Q96II8 AP003327.1-201ENST00000529684 127 ntBASIC5.41□□□□□ -1.54
LRCH3Q96II8 AC122688.1-201ENST00000541494 223 ntBASIC5.41□□□□□ -1.54
LRCH3Q96II8 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC5.41□□□□□ -1.54
LRCH3Q96II8 uc_338.28-201ENST00000612082 187 ntBASIC5.41□□□□□ -1.54
LRCH3Q96II8 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC5.41□□□□□ -1.54
LRCH3Q96II8 PCDH11X-202ENST00000361655 4126 ntAPPRIS ALT2 TSL 1 (best) BASIC5.41□□□□□ -1.54
LRCH3Q96II8 PIAS2-204ENST00000585916 11075 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
LRCH3Q96II8 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC5.41□□□□□ -1.54
LRCH3Q96II8 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
LRCH3Q96II8 PTK2-206ENST00000517712 3351 ntTSL 2 BASIC5.41□□□□□ -1.54
LRCH3Q96II8 EPB41L2-226ENST00000530757 4360 ntTSL 2 BASIC5.41□□□□□ -1.54
LRCH3Q96II8 KCNH5-201ENST00000322893 11290 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
LRCH3Q96II8 F2RL2-201ENST00000296641 3429 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
LRCH3Q96II8 NR3C2-202ENST00000344721 5712 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
LRCH3Q96II8 FRYL-209ENST00000506685 1940 ntTSL 5 BASIC5.4□□□□□ -1.54
LRCH3Q96II8 AC133552.1-201ENST00000569988 4007 ntBASIC5.4□□□□□ -1.54
LRCH3Q96II8 PDS5B-201ENST00000315596 7497 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
LRCH3Q96II8 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC5.4□□□□□ -1.54
LRCH3Q96II8 ST8SIA4-201ENST00000231461 6303 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
LRCH3Q96II8 ATF2-201ENST00000264110 4176 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
LRCH3Q96II8 MUC17-201ENST00000306151 14247 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
LRCH3Q96II8 FOXP1-IT1-201ENST00000498714 3539 ntTSL 2 BASIC5.4□□□□□ -1.54
LRCH3Q96II8 RNU6-324P-201ENST00000363957 106 ntBASIC5.4□□□□□ -1.54
LRCH3Q96II8 RNU6-1164P-201ENST00000364428 107 ntBASIC5.4□□□□□ -1.54
LRCH3Q96II8 SNORA36A-201ENST00000384221 132 ntBASIC5.4□□□□□ -1.54
LRCH3Q96II8 MIR554-201ENST00000384874 96 ntBASIC5.4□□□□□ -1.54
LRCH3Q96II8 AL512633.1-201ENST00000399931 655 ntBASIC5.4□□□□□ -1.54
LRCH3Q96II8 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
LRCH3Q96II8 RNU6-1245P-201ENST00000411130 106 ntBASIC5.4□□□□□ -1.54
LRCH3Q96II8 CYCSP49-201ENST00000420810 319 ntBASIC5.4□□□□□ -1.54
LRCH3Q96II8 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC5.4□□□□□ -1.54
LRCH3Q96II8 ABCC13-202ENST00000463099 3842 ntBASIC5.4□□□□□ -1.54
LRCH3Q96II8 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC5.4□□□□□ -1.54
LRCH3Q96II8 AL139124.1-201ENST00000609123 421 ntBASIC5.4□□□□□ -1.54
LRCH3Q96II8 LINC01232-203ENST00000625369 576 ntTSL 4 BASIC5.4□□□□□ -1.54
LRCH3Q96II8 KIAA1524-208ENST00000625495 147 ntTSL 5 BASIC5.4□□□□□ -1.54
LRCH3Q96II8 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC5.4□□□□□ -1.54
LRCH3Q96II8 MIR3674-201ENST00000636576 68 ntBASIC5.4□□□□□ -1.54
LRCH3Q96II8 KMT2D-201ENST00000301067 19419 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.54
LRCH3Q96II8 CCDC169-204ENST00000379864 5944 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
LRCH3Q96II8 ATP1B4-202ENST00000361319 3856 ntAPPRIS P3 TSL 1 (best) BASIC5.4□□□□□ -1.55
LRCH3Q96II8 AC093535.2-201ENST00000624769 2326 ntBASIC5.4□□□□□ -1.55
LRCH3Q96II8 PLEKHA1-203ENST00000368990 14010 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
LRCH3Q96II8 AKAP6-212ENST00000557272 4601 ntTSL 5 BASIC5.39□□□□□ -1.55
LRCH3Q96II8 GRIA2-202ENST00000296526 5621 ntAPPRIS P3 TSL 1 (best) BASIC5.39□□□□□ -1.55
LRCH3Q96II8 ABI1-210ENST00000376170 3362 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
LRCH3Q96II8 MTUS1-202ENST00000297488 3731 ntAPPRIS ALT1 TSL 1 (best) BASIC5.39□□□□□ -1.55
LRCH3Q96II8 AC090971.4-201ENST00000560291 1800 ntBASIC5.39□□□□□ -1.55
LRCH3Q96II8 LCLAT1-203ENST00000379509 4888 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
LRCH3Q96II8 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC5.39□□□□□ -1.55
LRCH3Q96II8 ARHGEF3-203ENST00000413728 3992 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
LRCH3Q96II8 CSPP1-201ENST00000262210 4367 ntAPPRIS P3 TSL 1 (best) BASIC5.39□□□□□ -1.55
LRCH3Q96II8 DNM3OS-201ENST00000417354 4358 ntTSL 4 BASIC5.39□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 102.4 ms