Protein–RNA interactions for Protein: Q96BQ3

TRIM43, Tripartite motif-containing protein 43, humanhuman

Predicted RBP Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM43Q96BQ3 RPS4XP3-201ENST00000398541 413 ntBASIC3.62□□□□□ -1.83
TRIM43Q96BQ3 RPS4XP7-201ENST00000406274 780 ntBASIC3.62□□□□□ -1.83
TRIM43Q96BQ3 RNU6-1025P-201ENST00000410629 104 ntBASIC3.62□□□□□ -1.83
TRIM43Q96BQ3 AC092047.1-201ENST00000424997 240 ntBASIC3.62□□□□□ -1.83
TRIM43Q96BQ3 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC3.62□□□□□ -1.83
TRIM43Q96BQ3 HMGN2P20-201ENST00000437531 273 ntBASIC3.62□□□□□ -1.83
TRIM43Q96BQ3 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC3.62□□□□□ -1.83
TRIM43Q96BQ3 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC3.62□□□□□ -1.83
TRIM43Q96BQ3 PRPS1P1-201ENST00000445305 876 ntBASIC3.62□□□□□ -1.83
TRIM43Q96BQ3 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC3.62□□□□□ -1.83
TRIM43Q96BQ3 RNU7-167P-201ENST00000459160 62 ntBASIC3.62□□□□□ -1.83
TRIM43Q96BQ3 OARD1-209ENST00000471367 401 ntTSL 2 BASIC3.62□□□□□ -1.83
TRIM43Q96BQ3 AL135752.1-201ENST00000479477 471 ntBASIC3.62□□□□□ -1.83
TRIM43Q96BQ3 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC3.62□□□□□ -1.83
TRIM43Q96BQ3 AC022690.1-201ENST00000526681 550 ntBASIC3.62□□□□□ -1.83
TRIM43Q96BQ3 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC3.62□□□□□ -1.83
TRIM43Q96BQ3 MIR3941-201ENST00000582572 103 ntBASIC3.62□□□□□ -1.83
TRIM43Q96BQ3 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC3.62□□□□□ -1.83
TRIM43Q96BQ3 AC004805.2-201ENST00000605382 482 ntBASIC3.62□□□□□ -1.83
TRIM43Q96BQ3 Y_RNA.804-201ENST00000615262 101 ntBASIC3.62□□□□□ -1.83
TRIM43Q96BQ3 RDM1-219ENST00000615378 542 ntTSL 3 BASIC3.62□□□□□ -1.83
TRIM43Q96BQ3 AC104260.1-201ENST00000616660 539 ntBASIC3.62□□□□□ -1.83
TRIM43Q96BQ3 AC002076.2-201ENST00000617362 122 ntBASIC3.62□□□□□ -1.83
TRIM43Q96BQ3 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC3.62□□□□□ -1.83
TRIM43Q96BQ3 AC009248.2-201ENST00000619826 254 ntBASIC3.62□□□□□ -1.83
TRIM43Q96BQ3 U7.8-201ENST00000619968 63 ntBASIC3.62□□□□□ -1.83
TRIM43Q96BQ3 SNORD39.4-201ENST00000620099 78 ntBASIC3.62□□□□□ -1.83
TRIM43Q96BQ3 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC3.62□□□□□ -1.83
TRIM43Q96BQ3 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC3.62□□□□□ -1.83
TRIM43Q96BQ3 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
TRIM43Q96BQ3 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC3.62□□□□□ -1.83
TRIM43Q96BQ3 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC3.61□□□□□ -1.83
TRIM43Q96BQ3 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC3.61□□□□□ -1.83
TRIM43Q96BQ3 SNORA1.3-201ENST00000384676 136 ntBASIC3.61□□□□□ -1.83
TRIM43Q96BQ3 MIR578-201ENST00000384828 96 ntBASIC3.61□□□□□ -1.83
TRIM43Q96BQ3 Z99755.1-201ENST00000414048 380 ntBASIC3.61□□□□□ -1.83
TRIM43Q96BQ3 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC3.61□□□□□ -1.83
TRIM43Q96BQ3 ATP5HP2-201ENST00000433885 485 ntBASIC3.61□□□□□ -1.83
TRIM43Q96BQ3 SNRPEP4-201ENST00000435815 279 ntBASIC3.61□□□□□ -1.83
TRIM43Q96BQ3 SNRPEP9-201ENST00000436794 238 ntBASIC3.61□□□□□ -1.83
TRIM43Q96BQ3 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC3.61□□□□□ -1.83
TRIM43Q96BQ3 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC3.61□□□□□ -1.83
TRIM43Q96BQ3 DYNLL1P5-201ENST00000467158 270 ntBASIC3.61□□□□□ -1.83
TRIM43Q96BQ3 RPL21P93-201ENST00000480465 489 ntBASIC3.61□□□□□ -1.83
TRIM43Q96BQ3 AC083904.1-201ENST00000487828 231 ntBASIC3.61□□□□□ -1.83
TRIM43Q96BQ3 AC079140.5-201ENST00000507882 310 ntBASIC3.61□□□□□ -1.83
TRIM43Q96BQ3 RNA5SP356-201ENST00000515972 94 ntBASIC3.61□□□□□ -1.83
TRIM43Q96BQ3 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC3.61□□□□□ -1.83
TRIM43Q96BQ3 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC3.61□□□□□ -1.83
TRIM43Q96BQ3 AC087241.2-201ENST00000535801 324 ntBASIC3.61□□□□□ -1.83
TRIM43Q96BQ3 AC026333.2-201ENST00000542164 106 ntBASIC3.61□□□□□ -1.83
TRIM43Q96BQ3 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC3.61□□□□□ -1.83
TRIM43Q96BQ3 VN1R80P-201ENST00000597126 338 ntBASIC3.61□□□□□ -1.83
TRIM43Q96BQ3 AC012119.1-201ENST00000603184 222 ntBASIC3.61□□□□□ -1.83
TRIM43Q96BQ3 AC103705.1-201ENST00000619013 241 ntBASIC3.61□□□□□ -1.83
TRIM43Q96BQ3 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC3.61□□□□□ -1.83
TRIM43Q96BQ3 PLCE1P1-201ENST00000622094 305 ntBASIC3.61□□□□□ -1.83
TRIM43Q96BQ3 AC099506.2-201ENST00000623074 221 ntBASIC3.61□□□□□ -1.83
TRIM43Q96BQ3 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC3.61□□□□□ -1.83
TRIM43Q96BQ3 RPS4XP5-202ENST00000449995 1334 ntBASIC3.61□□□□□ -1.83
TRIM43Q96BQ3 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC3.61□□□□□ -1.83
TRIM43Q96BQ3 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
TRIM43Q96BQ3 AC121333.1-201ENST00000567488 2709 ntBASIC3.6□□□□□ -1.83
TRIM43Q96BQ3 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
TRIM43Q96BQ3 RNU6-845P-201ENST00000362578 103 ntBASIC3.6□□□□□ -1.83
TRIM43Q96BQ3 RNU6-371P-201ENST00000364283 108 ntBASIC3.6□□□□□ -1.83
TRIM43Q96BQ3 IARS-201ENST00000375627 697 ntTSL 3 BASIC3.6□□□□□ -1.83
TRIM43Q96BQ3 RNU6-1179P-201ENST00000384667 107 ntBASIC3.6□□□□□ -1.83
TRIM43Q96BQ3 USP9YP20-201ENST00000419224 558 ntBASIC3.6□□□□□ -1.83
TRIM43Q96BQ3 AL645937.1-202ENST00000421799 937 ntBASIC3.6□□□□□ -1.83
TRIM43Q96BQ3 HMGB1P30-201ENST00000492455 606 ntBASIC3.6□□□□□ -1.83
TRIM43Q96BQ3 AC091951.2-201ENST00000500762 203 ntBASIC3.6□□□□□ -1.83
TRIM43Q96BQ3 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC3.6□□□□□ -1.83
TRIM43Q96BQ3 AC009901.1-201ENST00000506703 541 ntBASIC3.6□□□□□ -1.83
TRIM43Q96BQ3 FAM206BP-201ENST00000510179 541 ntBASIC3.6□□□□□ -1.83
TRIM43Q96BQ3 AC008716.1-201ENST00000511084 513 ntBASIC3.6□□□□□ -1.83
TRIM43Q96BQ3 AC112206.3-201ENST00000514578 389 ntBASIC3.6□□□□□ -1.83
TRIM43Q96BQ3 RNU6-507P-201ENST00000516045 100 ntBASIC3.6□□□□□ -1.83
TRIM43Q96BQ3 RNU6-875P-201ENST00000516488 106 ntBASIC3.6□□□□□ -1.83
TRIM43Q96BQ3 AC107953.1-201ENST00000522216 297 ntBASIC3.6□□□□□ -1.83
TRIM43Q96BQ3 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC3.6□□□□□ -1.83
TRIM43Q96BQ3 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC3.6□□□□□ -1.83
TRIM43Q96BQ3 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC3.6□□□□□ -1.83
TRIM43Q96BQ3 MIR3162-201ENST00000581818 82 ntBASIC3.6□□□□□ -1.83
TRIM43Q96BQ3 BNIP3P25-201ENST00000596023 559 ntBASIC3.6□□□□□ -1.83
TRIM43Q96BQ3 MIR6076-201ENST00000617521 113 ntBASIC3.6□□□□□ -1.83
TRIM43Q96BQ3 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
TRIM43Q96BQ3 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
TRIM43Q96BQ3 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
TRIM43Q96BQ3 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC3.59□□□□□ -1.83
TRIM43Q96BQ3 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC3.59□□□□□ -1.83
TRIM43Q96BQ3 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC3.59□□□□□ -1.83
TRIM43Q96BQ3 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
TRIM43Q96BQ3 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
TRIM43Q96BQ3 U3.12-201ENST00000364498 214 ntBASIC3.59□□□□□ -1.83
TRIM43Q96BQ3 RNU6-217P-201ENST00000384164 104 ntBASIC3.59□□□□□ -1.83
TRIM43Q96BQ3 EIF4E2P1-201ENST00000393781 255 ntBASIC3.59□□□□□ -1.83
TRIM43Q96BQ3 RPLP0P7-201ENST00000416050 667 ntBASIC3.59□□□□□ -1.83
TRIM43Q96BQ3 RPL7P10-201ENST00000417407 739 ntBASIC3.59□□□□□ -1.83
TRIM43Q96BQ3 RPL21P109-201ENST00000422213 475 ntBASIC3.59□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 208.6 ms