Protein–RNA interactions for Protein: Q8IVW4

CDKL3, Cyclin-dependent kinase-like 3, humanhuman

Predicted RBP Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL3Q8IVW4 SKA2P1-201ENST00000425592 390 ntBASIC1.96□□□□□ -2.1
CDKL3Q8IVW4 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC1.96□□□□□ -2.1
CDKL3Q8IVW4 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC1.96□□□□□ -2.1
CDKL3Q8IVW4 MTND1P28-201ENST00000435623 950 ntBASIC1.96□□□□□ -2.1
CDKL3Q8IVW4 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
CDKL3Q8IVW4 AL354941.1-201ENST00000438600 464 ntBASIC1.96□□□□□ -2.1
CDKL3Q8IVW4 AL512658.1-201ENST00000449072 533 ntTSL 3 BASIC1.96□□□□□ -2.1
CDKL3Q8IVW4 AL121769.1-201ENST00000469473 401 ntBASIC1.96□□□□□ -2.1
CDKL3Q8IVW4 C1orf112-206ENST00000472795 925 ntAPPRIS ALT2 TSL 2 BASIC1.96□□□□□ -2.1
CDKL3Q8IVW4 RPL23AP41-201ENST00000484754 458 ntBASIC1.96□□□□□ -2.1
CDKL3Q8IVW4 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC1.96□□□□□ -2.1
CDKL3Q8IVW4 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC1.96□□□□□ -2.1
CDKL3Q8IVW4 AC096736.1-201ENST00000512609 947 ntTSL 3 BASIC1.96□□□□□ -2.1
CDKL3Q8IVW4 AC023632.5-201ENST00000521010 491 ntTSL 3 BASIC1.96□□□□□ -2.1
CDKL3Q8IVW4 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC1.96□□□□□ -2.1
CDKL3Q8IVW4 DEFB108A-201ENST00000530110 222 ntBASIC1.96□□□□□ -2.1
CDKL3Q8IVW4 AC118273.2-201ENST00000532092 465 ntBASIC1.96□□□□□ -2.1
CDKL3Q8IVW4 AL450442.1-201ENST00000554042 854 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
CDKL3Q8IVW4 AL157955.1-201ENST00000554433 331 ntTSL 3 BASIC1.96□□□□□ -2.1
CDKL3Q8IVW4 AL133241.1-201ENST00000556832 487 ntBASIC1.96□□□□□ -2.1
CDKL3Q8IVW4 AC090888.2-201ENST00000559765 1144 ntBASIC1.96□□□□□ -2.1
CDKL3Q8IVW4 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC1.96□□□□□ -2.1
CDKL3Q8IVW4 AL355598.1-201ENST00000604169 202 ntBASIC1.96□□□□□ -2.1
CDKL3Q8IVW4 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC1.96□□□□□ -2.1
CDKL3Q8IVW4 AC021755.4-201ENST00000616620 456 ntBASIC1.96□□□□□ -2.1
CDKL3Q8IVW4 AL031667.3-201ENST00000620124 655 ntBASIC1.96□□□□□ -2.1
CDKL3Q8IVW4 MIR7843-201ENST00000622274 79 ntBASIC1.96□□□□□ -2.1
CDKL3Q8IVW4 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC1.96□□□□□ -2.1
CDKL3Q8IVW4 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
CDKL3Q8IVW4 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC1.95□□□□□ -2.1
CDKL3Q8IVW4 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC1.95□□□□□ -2.1
CDKL3Q8IVW4 GSTA9P-201ENST00000406231 611 ntBASIC1.95□□□□□ -2.1
CDKL3Q8IVW4 AC078974.1-201ENST00000411597 223 ntBASIC1.95□□□□□ -2.1
CDKL3Q8IVW4 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC1.95□□□□□ -2.1
CDKL3Q8IVW4 RPS24P7-201ENST00000416921 246 ntBASIC1.95□□□□□ -2.1
CDKL3Q8IVW4 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC1.95□□□□□ -2.1
CDKL3Q8IVW4 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC1.95□□□□□ -2.1
CDKL3Q8IVW4 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC1.95□□□□□ -2.1
CDKL3Q8IVW4 AC017048.2-201ENST00000431455 822 ntTSL 3 BASIC1.95□□□□□ -2.1
CDKL3Q8IVW4 HMGB3P12-201ENST00000438745 556 ntBASIC1.95□□□□□ -2.1
CDKL3Q8IVW4 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC1.95□□□□□ -2.1
CDKL3Q8IVW4 LINC01474-202ENST00000449235 628 ntTSL 3 BASIC1.95□□□□□ -2.1
CDKL3Q8IVW4 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC1.95□□□□□ -2.1
CDKL3Q8IVW4 FGF14-AS1-202ENST00000451630 321 ntTSL 2 BASIC1.95□□□□□ -2.1
CDKL3Q8IVW4 AC093110.1-201ENST00000456363 602 ntTSL 2 BASIC1.95□□□□□ -2.1
CDKL3Q8IVW4 AC108059.3-201ENST00000456388 214 ntBASIC1.95□□□□□ -2.1
CDKL3Q8IVW4 RPL38P4-201ENST00000502376 214 ntBASIC1.95□□□□□ -2.1
CDKL3Q8IVW4 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC1.95□□□□□ -2.1
CDKL3Q8IVW4 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC1.95□□□□□ -2.1
CDKL3Q8IVW4 HSPE1P18-201ENST00000517602 280 ntBASIC1.95□□□□□ -2.1
CDKL3Q8IVW4 AC108471.2-204ENST00000526807 784 ntTSL 5 BASIC1.95□□□□□ -2.1
CDKL3Q8IVW4 AP002428.1-201ENST00000527345 380 ntTSL 3 BASIC1.95□□□□□ -2.1
CDKL3Q8IVW4 LINC02235-201ENST00000534675 466 ntTSL 5 BASIC1.95□□□□□ -2.1
CDKL3Q8IVW4 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC1.95□□□□□ -2.1
CDKL3Q8IVW4 AC090503.1-201ENST00000548029 729 ntTSL 3 BASIC1.95□□□□□ -2.1
CDKL3Q8IVW4 MRPS36P5-201ENST00000551909 298 ntBASIC1.95□□□□□ -2.1
CDKL3Q8IVW4 SOX2-OT-224ENST00000595313 716 ntTSL 5 BASIC1.95□□□□□ -2.1
CDKL3Q8IVW4 AL158827.2-201ENST00000602494 330 ntBASIC1.95□□□□□ -2.1
CDKL3Q8IVW4 AL109918.3-201ENST00000603072 338 ntBASIC1.95□□□□□ -2.1
CDKL3Q8IVW4 AC098826.3-201ENST00000603823 466 ntBASIC1.95□□□□□ -2.1
CDKL3Q8IVW4 AL161798.1-201ENST00000604630 131 ntBASIC1.95□□□□□ -2.1
CDKL3Q8IVW4 AC069294.1-201ENST00000608397 350 ntBASIC1.95□□□□□ -2.1
CDKL3Q8IVW4 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC1.95□□□□□ -2.1
CDKL3Q8IVW4 DPY19L1-208ENST00000612226 607 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
CDKL3Q8IVW4 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC1.95□□□□□ -2.1
CDKL3Q8IVW4 C3orf49-203ENST00000616659 876 ntAPPRIS ALT2 TSL 5 BASIC1.95□□□□□ -2.1
CDKL3Q8IVW4 MYCBP2-AS1-209ENST00000631152 412 ntTSL 5 BASIC1.95□□□□□ -2.1
CDKL3Q8IVW4 AL691447.3-201ENST00000635020 330 ntBASIC1.95□□□□□ -2.1
CDKL3Q8IVW4 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC1.95□□□□□ -2.1
CDKL3Q8IVW4 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC1.95□□□□□ -2.1
CDKL3Q8IVW4 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
CDKL3Q8IVW4 AC104454.1-201ENST00000421341 1401 ntBASIC1.94□□□□□ -2.1
CDKL3Q8IVW4 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC1.94□□□□□ -2.1
CDKL3Q8IVW4 RNU6-660P-201ENST00000364566 109 ntBASIC1.94□□□□□ -2.1
CDKL3Q8IVW4 RNU4-28P-201ENST00000364739 141 ntBASIC1.94□□□□□ -2.1
CDKL3Q8IVW4 U8.14-201ENST00000390843 143 ntBASIC1.94□□□□□ -2.1
CDKL3Q8IVW4 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC1.94□□□□□ -2.1
CDKL3Q8IVW4 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC1.94□□□□□ -2.1
CDKL3Q8IVW4 BX276092.3-201ENST00000424182 230 ntBASIC1.94□□□□□ -2.1
CDKL3Q8IVW4 AIMP1P2-201ENST00000425294 312 ntBASIC1.94□□□□□ -2.1
CDKL3Q8IVW4 TOMM20P4-201ENST00000427861 435 ntBASIC1.94□□□□□ -2.1
CDKL3Q8IVW4 AC007285.2-201ENST00000433088 518 ntTSL 3 BASIC1.94□□□□□ -2.1
CDKL3Q8IVW4 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC1.94□□□□□ -2.1
CDKL3Q8IVW4 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC1.94□□□□□ -2.1
CDKL3Q8IVW4 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC1.94□□□□□ -2.1
CDKL3Q8IVW4 MTCO1P42-201ENST00000457379 726 ntBASIC1.94□□□□□ -2.1
CDKL3Q8IVW4 RN7SL274P-201ENST00000492268 272 ntBASIC1.94□□□□□ -2.1
CDKL3Q8IVW4 RPF2P2-201ENST00000504693 896 ntBASIC1.94□□□□□ -2.1
CDKL3Q8IVW4 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
CDKL3Q8IVW4 RNA5SP165-201ENST00000517142 115 ntBASIC1.94□□□□□ -2.1
CDKL3Q8IVW4 MRPS36P3-201ENST00000519284 130 ntBASIC1.94□□□□□ -2.1
CDKL3Q8IVW4 EEF1A1P37-201ENST00000522748 715 ntBASIC1.94□□□□□ -2.1
CDKL3Q8IVW4 CD44-AS1-201ENST00000528869 587 ntTSL 4 BASIC1.94□□□□□ -2.1
CDKL3Q8IVW4 AL356432.3-201ENST00000568952 465 ntBASIC1.94□□□□□ -2.1
CDKL3Q8IVW4 MIR4529-201ENST00000578110 78 ntBASIC1.94□□□□□ -2.1
CDKL3Q8IVW4 AC105245.1-201ENST00000581934 244 ntBASIC1.94□□□□□ -2.1
CDKL3Q8IVW4 AP001004.1-201ENST00000582468 324 ntBASIC1.94□□□□□ -2.1
CDKL3Q8IVW4 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC1.94□□□□□ -2.1
CDKL3Q8IVW4 AP000811.1-201ENST00000603803 651 ntBASIC1.94□□□□□ -2.1
CDKL3Q8IVW4 AC112187.2-201ENST00000604345 283 ntBASIC1.94□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 96.4 ms