Protein–RNA interactions for Protein: Q7Z3V4

UBE3B, Ubiquitin-protein ligase E3B, humanhuman

Predictions only

Length 1,068 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3BQ7Z3V4 BX682237.1-201ENST00000415016 335 ntBASIC3.9□□□□□ -1.79
UBE3BQ7Z3V4 AC092809.3-201ENST00000415453 231 ntBASIC3.9□□□□□ -1.79
UBE3BQ7Z3V4 ACTR3BP6-201ENST00000422332 1241 ntBASIC3.9□□□□□ -1.79
UBE3BQ7Z3V4 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC3.9□□□□□ -1.79
UBE3BQ7Z3V4 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC3.9□□□□□ -1.79
UBE3BQ7Z3V4 AC079780.1-201ENST00000428259 207 ntBASIC3.9□□□□□ -1.79
UBE3BQ7Z3V4 RPS24P6-201ENST00000452670 400 ntBASIC3.9□□□□□ -1.79
UBE3BQ7Z3V4 RNU6-953P-201ENST00000459154 107 ntBASIC3.9□□□□□ -1.79
UBE3BQ7Z3V4 HSPE1P6-201ENST00000479457 291 ntBASIC3.9□□□□□ -1.79
UBE3BQ7Z3V4 VN1R104P-201ENST00000505115 1009 ntBASIC3.9□□□□□ -1.79
UBE3BQ7Z3V4 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.9□□□□□ -1.79
UBE3BQ7Z3V4 AC009812.2-201ENST00000517657 457 ntBASIC3.9□□□□□ -1.79
UBE3BQ7Z3V4 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC3.9□□□□□ -1.79
UBE3BQ7Z3V4 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC3.9□□□□□ -1.79
UBE3BQ7Z3V4 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC3.9□□□□□ -1.79
UBE3BQ7Z3V4 SARNP-203ENST00000552080 726 ntTSL 2 BASIC3.9□□□□□ -1.79
UBE3BQ7Z3V4 AC090115.3-201ENST00000553218 849 ntBASIC3.9□□□□□ -1.79
UBE3BQ7Z3V4 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC3.9□□□□□ -1.79
UBE3BQ7Z3V4 MIR622-201ENST00000638396 96 ntBASIC3.9□□□□□ -1.79
UBE3BQ7Z3V4 CPD-202ENST00000543464 4007 ntTSL 2 BASIC3.9□□□□□ -1.79
UBE3BQ7Z3V4 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
UBE3BQ7Z3V4 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
UBE3BQ7Z3V4 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC3.9□□□□□ -1.79
UBE3BQ7Z3V4 TTN-204ENST00000360870 18218 ntTSL 5 BASIC3.9□□□□□ -1.79
UBE3BQ7Z3V4 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC3.89□□□□□ -1.79
UBE3BQ7Z3V4 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC3.89□□□□□ -1.79
UBE3BQ7Z3V4 RNU6-600P-201ENST00000362524 99 ntBASIC3.89□□□□□ -1.79
UBE3BQ7Z3V4 Y_RNA.394-201ENST00000383942 103 ntBASIC3.89□□□□□ -1.79
UBE3BQ7Z3V4 SNORD15B-201ENST00000384714 146 ntBASIC3.89□□□□□ -1.79
UBE3BQ7Z3V4 SNORD70.1-201ENST00000391007 85 ntBASIC3.89□□□□□ -1.79
UBE3BQ7Z3V4 MIR548K-201ENST00000408406 116 ntBASIC3.89□□□□□ -1.79
UBE3BQ7Z3V4 VN1R36P-201ENST00000414936 291 ntBASIC3.89□□□□□ -1.79
UBE3BQ7Z3V4 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC3.89□□□□□ -1.79
UBE3BQ7Z3V4 TOMM22P1-201ENST00000418578 312 ntBASIC3.89□□□□□ -1.79
UBE3BQ7Z3V4 AL669831.1-202ENST00000428504 417 ntBASIC3.89□□□□□ -1.79
UBE3BQ7Z3V4 AC005534.2-201ENST00000431047 433 ntBASIC3.89□□□□□ -1.79
UBE3BQ7Z3V4 BX679664.1-201ENST00000434429 253 ntBASIC3.89□□□□□ -1.79
UBE3BQ7Z3V4 AC236972.2-201ENST00000434979 310 ntBASIC3.89□□□□□ -1.79
UBE3BQ7Z3V4 GTF2IP13-201ENST00000438487 386 ntBASIC3.89□□□□□ -1.79
UBE3BQ7Z3V4 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC3.89□□□□□ -1.79
UBE3BQ7Z3V4 MTCYBP6-201ENST00000441810 138 ntBASIC3.89□□□□□ -1.79
UBE3BQ7Z3V4 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC3.89□□□□□ -1.79
UBE3BQ7Z3V4 AL118496.2-201ENST00000448300 230 ntBASIC3.89□□□□□ -1.79
UBE3BQ7Z3V4 TEX41-209ENST00000451478 452 ntTSL 2 BASIC3.89□□□□□ -1.79
UBE3BQ7Z3V4 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC3.89□□□□□ -1.79
UBE3BQ7Z3V4 SNORD19B-201ENST00000459623 84 ntBASIC3.89□□□□□ -1.79
UBE3BQ7Z3V4 DYNLL1P5-201ENST00000467158 270 ntBASIC3.89□□□□□ -1.79
UBE3BQ7Z3V4 HIGD1AP13-201ENST00000509878 289 ntBASIC3.89□□□□□ -1.79
UBE3BQ7Z3V4 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC3.89□□□□□ -1.79
UBE3BQ7Z3V4 SNORA70.14-201ENST00000516205 110 ntBASIC3.89□□□□□ -1.79
UBE3BQ7Z3V4 SCARNA15.1-201ENST00000516384 125 ntBASIC3.89□□□□□ -1.79
UBE3BQ7Z3V4 RNU6-1088P-201ENST00000516850 104 ntBASIC3.89□□□□□ -1.79
UBE3BQ7Z3V4 SNORA25.17-201ENST00000517184 124 ntBASIC3.89□□□□□ -1.79
UBE3BQ7Z3V4 AC022080.3-201ENST00000544433 482 ntBASIC3.89□□□□□ -1.79
UBE3BQ7Z3V4 EIF4BP1-201ENST00000554881 351 ntBASIC3.89□□□□□ -1.79
UBE3BQ7Z3V4 FAM60BP-201ENST00000578364 658 ntBASIC3.89□□□□□ -1.79
UBE3BQ7Z3V4 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC3.89□□□□□ -1.79
UBE3BQ7Z3V4 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC3.89□□□□□ -1.79
UBE3BQ7Z3V4 DPPA3P3-201ENST00000603842 430 ntBASIC3.89□□□□□ -1.79
UBE3BQ7Z3V4 AL360181.4-201ENST00000621752 134 ntBASIC3.89□□□□□ -1.79
UBE3BQ7Z3V4 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC3.89□□□□□ -1.79
UBE3BQ7Z3V4 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC3.89□□□□□ -1.79
UBE3BQ7Z3V4 HSPA8P4-201ENST00000511877 1920 ntBASIC3.88□□□□□ -1.79
UBE3BQ7Z3V4 RNU6-254P-201ENST00000363377 107 ntBASIC3.88□□□□□ -1.79
UBE3BQ7Z3V4 IARS-201ENST00000375627 697 ntTSL 3 BASIC3.88□□□□□ -1.79
UBE3BQ7Z3V4 RNU6-393P-201ENST00000384475 107 ntBASIC3.88□□□□□ -1.79
UBE3BQ7Z3V4 SNORA44-201ENST00000384584 132 ntBASIC3.88□□□□□ -1.79
UBE3BQ7Z3V4 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC3.88□□□□□ -1.79
UBE3BQ7Z3V4 CISD1P1-201ENST00000393907 327 ntBASIC3.88□□□□□ -1.79
UBE3BQ7Z3V4 RN7SKP220-201ENST00000410611 288 ntBASIC3.88□□□□□ -1.79
UBE3BQ7Z3V4 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC3.88□□□□□ -1.79
UBE3BQ7Z3V4 HMGN1P18-201ENST00000457642 277 ntBASIC3.88□□□□□ -1.79
UBE3BQ7Z3V4 AP001486.1-201ENST00000463339 476 ntBASIC3.88□□□□□ -1.79
UBE3BQ7Z3V4 RPL7P43-201ENST00000478876 753 ntBASIC3.88□□□□□ -1.79
UBE3BQ7Z3V4 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC3.88□□□□□ -1.79
UBE3BQ7Z3V4 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC3.88□□□□□ -1.79
UBE3BQ7Z3V4 RNU6-927P-201ENST00000516199 100 ntBASIC3.88□□□□□ -1.79
UBE3BQ7Z3V4 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC3.88□□□□□ -1.79
UBE3BQ7Z3V4 AP002404.1-201ENST00000532005 451 ntBASIC3.88□□□□□ -1.79
UBE3BQ7Z3V4 AP000763.2-201ENST00000540641 163 ntBASIC3.88□□□□□ -1.79
UBE3BQ7Z3V4 AL355836.1-201ENST00000555951 870 ntBASIC3.88□□□□□ -1.79
UBE3BQ7Z3V4 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC3.88□□□□□ -1.79
UBE3BQ7Z3V4 MIR3690-201ENST00000580266 75 ntBASIC3.88□□□□□ -1.79
UBE3BQ7Z3V4 AL137843.1-201ENST00000605078 385 ntBASIC3.88□□□□□ -1.79
UBE3BQ7Z3V4 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC3.88□□□□□ -1.79
UBE3BQ7Z3V4 AC092628.2-201ENST00000622492 339 ntBASIC3.88□□□□□ -1.79
UBE3BQ7Z3V4 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC3.88□□□□□ -1.79
UBE3BQ7Z3V4 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC3.88□□□□□ -1.79
UBE3BQ7Z3V4 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.88□□□□□ -1.79
UBE3BQ7Z3V4 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
UBE3BQ7Z3V4 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.87□□□□□ -1.79
UBE3BQ7Z3V4 RNU6-173P-201ENST00000364215 104 ntBASIC3.87□□□□□ -1.79
UBE3BQ7Z3V4 Y_RNA.315-201ENST00000365117 102 ntBASIC3.87□□□□□ -1.79
UBE3BQ7Z3V4 RNU6-715P-201ENST00000365204 103 ntBASIC3.87□□□□□ -1.79
UBE3BQ7Z3V4 RNU6-434P-201ENST00000384376 107 ntBASIC3.87□□□□□ -1.79
UBE3BQ7Z3V4 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC3.87□□□□□ -1.79
UBE3BQ7Z3V4 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC3.87□□□□□ -1.79
UBE3BQ7Z3V4 AC080125.1-201ENST00000414888 684 ntBASIC3.87□□□□□ -1.79
UBE3BQ7Z3V4 AF228730.4-201ENST00000421457 183 ntBASIC3.87□□□□□ -1.79
UBE3BQ7Z3V4 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC3.87□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 109.1 ms