Protein–RNA interactions for Protein: Q5VVM6

CCDC30, Coiled-coil domain-containing protein 30, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC30Q5VVM6 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC3.2□□□□□ -1.9
CCDC30Q5VVM6 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC3.2□□□□□ -1.9
CCDC30Q5VVM6 AC068790.2-201ENST00000602601 557 ntBASIC3.2□□□□□ -1.9
CCDC30Q5VVM6 AC019159.1-201ENST00000605094 187 ntBASIC3.2□□□□□ -1.9
CCDC30Q5VVM6 MIR98-201ENST00000606724 119 ntBASIC3.2□□□□□ -1.9
CCDC30Q5VVM6 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC3.2□□□□□ -1.9
CCDC30Q5VVM6 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC3.2□□□□□ -1.9
CCDC30Q5VVM6 CTSLP2-204ENST00000629029 392 ntBASIC3.2□□□□□ -1.9
CCDC30Q5VVM6 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC3.2□□□□□ -1.9
CCDC30Q5VVM6 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
CCDC30Q5VVM6 Y_RNA.33-201ENST00000362591 102 ntBASIC3.19□□□□□ -1.9
CCDC30Q5VVM6 RNU6-179P-201ENST00000363350 107 ntBASIC3.19□□□□□ -1.9
CCDC30Q5VVM6 RNA5SP456-201ENST00000364002 114 ntBASIC3.19□□□□□ -1.9
CCDC30Q5VVM6 RN7SKP226-201ENST00000364912 300 ntBASIC3.19□□□□□ -1.9
CCDC30Q5VVM6 EEF1E1-201ENST00000379715 1077 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
CCDC30Q5VVM6 SNORA75-201ENST00000384158 137 ntBASIC3.19□□□□□ -1.9
CCDC30Q5VVM6 HNRNPDLP1-201ENST00000412834 550 ntBASIC3.19□□□□□ -1.9
CCDC30Q5VVM6 USP9YP6-201ENST00000413550 854 ntBASIC3.19□□□□□ -1.9
CCDC30Q5VVM6 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC3.19□□□□□ -1.9
CCDC30Q5VVM6 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
CCDC30Q5VVM6 AC133104.1-201ENST00000429100 218 ntBASIC3.19□□□□□ -1.9
CCDC30Q5VVM6 LINC01724-201ENST00000430519 621 ntTSL 3 BASIC3.19□□□□□ -1.9
CCDC30Q5VVM6 PCYT1B-AS1-201ENST00000432626 275 ntTSL 2 BASIC3.19□□□□□ -1.9
CCDC30Q5VVM6 MTCO3P5-201ENST00000433620 714 ntBASIC3.19□□□□□ -1.9
CCDC30Q5VVM6 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
CCDC30Q5VVM6 RPS27AP9-201ENST00000477681 438 ntBASIC3.19□□□□□ -1.9
CCDC30Q5VVM6 LINC02377-202ENST00000505436 523 ntTSL 5 BASIC3.19□□□□□ -1.9
CCDC30Q5VVM6 AC116562.3-201ENST00000506136 177 ntBASIC3.19□□□□□ -1.9
CCDC30Q5VVM6 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC3.19□□□□□ -1.9
CCDC30Q5VVM6 RNU6-1183P-201ENST00000517054 60 ntBASIC3.19□□□□□ -1.9
CCDC30Q5VVM6 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC3.19□□□□□ -1.9
CCDC30Q5VVM6 MTCO2P4-201ENST00000517968 247 ntBASIC3.19□□□□□ -1.9
CCDC30Q5VVM6 AP001646.1-201ENST00000527936 915 ntBASIC3.19□□□□□ -1.9
CCDC30Q5VVM6 AC068587.5-201ENST00000528506 175 ntBASIC3.19□□□□□ -1.9
CCDC30Q5VVM6 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC3.19□□□□□ -1.9
CCDC30Q5VVM6 GLYCAM1-201ENST00000546596 285 ntBASIC3.19□□□□□ -1.9
CCDC30Q5VVM6 AC007151.1-201ENST00000572774 483 ntBASIC3.19□□□□□ -1.9
CCDC30Q5VVM6 AC098848.2-201ENST00000588023 330 ntBASIC3.19□□□□□ -1.9
CCDC30Q5VVM6 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC3.19□□□□□ -1.9
CCDC30Q5VVM6 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
CCDC30Q5VVM6 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC3.19□□□□□ -1.9
CCDC30Q5VVM6 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
CCDC30Q5VVM6 AL390237.1-201ENST00000404226 1415 ntBASIC3.19□□□□□ -1.9
CCDC30Q5VVM6 AC010889.1-201ENST00000566193 2666 ntBASIC3.18□□□□□ -1.9
CCDC30Q5VVM6 RNU6-61P-201ENST00000365528 109 ntBASIC3.18□□□□□ -1.9
CCDC30Q5VVM6 RNU6-348P-201ENST00000384386 107 ntBASIC3.18□□□□□ -1.9
CCDC30Q5VVM6 SNORA40C-201ENST00000391285 128 ntBASIC3.18□□□□□ -1.9
CCDC30Q5VVM6 CD3D-202ENST00000392884 476 ntTSL 2 BASIC3.18□□□□□ -1.9
CCDC30Q5VVM6 AL359511.1-201ENST00000402970 211 ntBASIC3.18□□□□□ -1.9
CCDC30Q5VVM6 HMGN2P35-201ENST00000412164 270 ntBASIC3.18□□□□□ -1.9
CCDC30Q5VVM6 CALM2P2-201ENST00000428512 440 ntBASIC3.18□□□□□ -1.9
CCDC30Q5VVM6 MTATP6P16-201ENST00000434543 526 ntBASIC3.18□□□□□ -1.9
CCDC30Q5VVM6 MTCO2P16-201ENST00000436962 677 ntBASIC3.18□□□□□ -1.9
CCDC30Q5VVM6 OSTCP8-201ENST00000445117 448 ntBASIC3.18□□□□□ -1.9
CCDC30Q5VVM6 Z96811.1-201ENST00000445880 108 ntBASIC3.18□□□□□ -1.9
CCDC30Q5VVM6 RPL23AP45-201ENST00000476406 468 ntBASIC3.18□□□□□ -1.9
CCDC30Q5VVM6 AC098591.2-201ENST00000510152 315 ntBASIC3.18□□□□□ -1.9
CCDC30Q5VVM6 MRPS36P2-201ENST00000512569 299 ntBASIC3.18□□□□□ -1.9
CCDC30Q5VVM6 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC3.18□□□□□ -1.9
CCDC30Q5VVM6 SCARNA11.3-201ENST00000517276 130 ntBASIC3.18□□□□□ -1.9
CCDC30Q5VVM6 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC3.18□□□□□ -1.9
CCDC30Q5VVM6 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC3.18□□□□□ -1.9
CCDC30Q5VVM6 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC3.18□□□□□ -1.9
CCDC30Q5VVM6 MIR4528-201ENST00000577763 90 ntBASIC3.18□□□□□ -1.9
CCDC30Q5VVM6 MIR4782-201ENST00000577987 79 ntBASIC3.18□□□□□ -1.9
CCDC30Q5VVM6 AL121992.2-201ENST00000606262 256 ntBASIC3.18□□□□□ -1.9
CCDC30Q5VVM6 AC005332.10-201ENST00000612725 619 ntBASIC3.18□□□□□ -1.9
CCDC30Q5VVM6 AP001486.3-201ENST00000615334 372 ntBASIC3.18□□□□□ -1.9
CCDC30Q5VVM6 AC099842.1-201ENST00000619919 596 ntBASIC3.18□□□□□ -1.9
CCDC30Q5VVM6 U6.99-201ENST00000637524 83 ntBASIC3.18□□□□□ -1.9
CCDC30Q5VVM6 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
CCDC30Q5VVM6 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
CCDC30Q5VVM6 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC3.17□□□□□ -1.9
CCDC30Q5VVM6 ADAM3A-203ENST00000461344 2157 ntBASIC3.17□□□□□ -1.9
CCDC30Q5VVM6 GSTA3-201ENST00000211122 902 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
CCDC30Q5VVM6 SNORA68.1-201ENST00000364537 132 ntBASIC3.17□□□□□ -1.9
CCDC30Q5VVM6 AL513475.1-201ENST00000406602 315 ntBASIC3.17□□□□□ -1.9
CCDC30Q5VVM6 RNU6-1025P-201ENST00000410629 104 ntBASIC3.17□□□□□ -1.9
CCDC30Q5VVM6 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
CCDC30Q5VVM6 AL513477.1-202ENST00000417061 214 ntBASIC3.17□□□□□ -1.9
CCDC30Q5VVM6 BX295541.1-201ENST00000417774 250 ntBASIC3.17□□□□□ -1.9
CCDC30Q5VVM6 LINC01040-201ENST00000425048 666 ntTSL 2 BASIC3.17□□□□□ -1.9
CCDC30Q5VVM6 MTCO1P19-201ENST00000443487 500 ntBASIC3.17□□□□□ -1.9
CCDC30Q5VVM6 AL360221.1-201ENST00000445989 335 ntBASIC3.17□□□□□ -1.9
CCDC30Q5VVM6 LINC01069-201ENST00000452933 546 ntTSL 5 BASIC3.17□□□□□ -1.9
CCDC30Q5VVM6 MTCYBP1-201ENST00000454315 1119 ntBASIC3.17□□□□□ -1.9
CCDC30Q5VVM6 AC022364.2-201ENST00000457963 554 ntBASIC3.17□□□□□ -1.9
CCDC30Q5VVM6 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC3.17□□□□□ -1.9
CCDC30Q5VVM6 AC079349.1-201ENST00000509096 589 ntTSL 2 BASIC3.17□□□□□ -1.9
CCDC30Q5VVM6 AC022447.1-201ENST00000515358 464 ntBASIC3.17□□□□□ -1.9
CCDC30Q5VVM6 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC3.17□□□□□ -1.9
CCDC30Q5VVM6 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC3.17□□□□□ -1.9
CCDC30Q5VVM6 AC025755.1-201ENST00000521306 278 ntBASIC3.17□□□□□ -1.9
CCDC30Q5VVM6 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC3.17□□□□□ -1.9
CCDC30Q5VVM6 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC3.17□□□□□ -1.9
CCDC30Q5VVM6 AC006199.1-201ENST00000548728 219 ntBASIC3.17□□□□□ -1.9
CCDC30Q5VVM6 NBR2-204ENST00000587322 63 ntBASIC3.17□□□□□ -1.9
CCDC30Q5VVM6 AC119751.7-201ENST00000600494 245 ntBASIC3.17□□□□□ -1.9
CCDC30Q5VVM6 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC3.17□□□□□ -1.9
CCDC30Q5VVM6 AL391813.1-201ENST00000603098 260 ntBASIC3.17□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 119.8 ms