Protein–RNA interactions for Protein: Q5TC82

RC3H1, Roquin-1, humanhuman

Known RBP Predictions only

Length 1,133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1Q5TC82 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC5.51□□□□□ -1.53
RC3H1Q5TC82 AC097462.2-201ENST00000504623 481 ntBASIC5.51□□□□□ -1.53
RC3H1Q5TC82 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC5.51□□□□□ -1.53
RC3H1Q5TC82 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC5.51□□□□□ -1.53
RC3H1Q5TC82 RPL21P9-201ENST00000556149 474 ntBASIC5.51□□□□□ -1.53
RC3H1Q5TC82 MIR1273C-201ENST00000578669 77 ntBASIC5.51□□□□□ -1.53
RC3H1Q5TC82 MIR3684-201ENST00000579779 74 ntBASIC5.51□□□□□ -1.53
RC3H1Q5TC82 MIR4423-201ENST00000580922 80 ntBASIC5.51□□□□□ -1.53
RC3H1Q5TC82 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC5.51□□□□□ -1.53
RC3H1Q5TC82 AC039056.2-201ENST00000622261 511 ntBASIC5.51□□□□□ -1.53
RC3H1Q5TC82 Z99571.1-201ENST00000636677 394 ntBASIC5.51□□□□□ -1.53
RC3H1Q5TC82 KSR2-202ENST00000425217 17008 ntTSL 5 BASIC5.51□□□□□ -1.53
RC3H1Q5TC82 TMEM30A-202ENST00000370050 3775 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
RC3H1Q5TC82 TCF4-290ENST00000638154 7801 ntAPPRIS ALT1 TSL 5 BASIC5.51□□□□□ -1.53
RC3H1Q5TC82 TMEM71-210ENST00000523829 1974 ntAPPRIS ALT2 TSL 5 BASIC5.51□□□□□ -1.53
RC3H1Q5TC82 AL731532.2-201ENST00000623542 1953 ntBASIC5.51□□□□□ -1.53
RC3H1Q5TC82 SEC31A-201ENST00000264405 3447 ntTSL 2 BASIC5.51□□□□□ -1.53
RC3H1Q5TC82 ANKRD34C-201ENST00000421388 4951 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
RC3H1Q5TC82 ZNF562-201ENST00000293648 12380 ntTSL 2 BASIC5.5□□□□□ -1.53
RC3H1Q5TC82 ABCA12-201ENST00000272895 9100 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
RC3H1Q5TC82 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
RC3H1Q5TC82 DNAH5-201ENST00000265104 15633 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
RC3H1Q5TC82 LRRC49-222ENST00000560158 1898 ntTSL 5 BASIC5.5□□□□□ -1.53
RC3H1Q5TC82 DGKH-206ENST00000536612 3957 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
RC3H1Q5TC82 TTC3-204ENST00000399017 10363 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
RC3H1Q5TC82 ADAM7-201ENST00000175238 3367 ntAPPRIS P2 TSL 1 (best) BASIC5.5□□□□□ -1.53
RC3H1Q5TC82 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC5.5□□□□□ -1.53
RC3H1Q5TC82 RNU6-312P-201ENST00000364629 107 ntBASIC5.5□□□□□ -1.53
RC3H1Q5TC82 MT-TC-201ENST00000387405 66 ntBASIC5.5□□□□□ -1.53
RC3H1Q5TC82 SNORA40-201ENST00000388090 126 ntBASIC5.5□□□□□ -1.53
RC3H1Q5TC82 Z82188.1-201ENST00000436709 154 ntBASIC5.5□□□□□ -1.53
RC3H1Q5TC82 TAB3-AS2-201ENST00000445240 292 ntTSL 5 BASIC5.5□□□□□ -1.53
RC3H1Q5TC82 AC016700.2-201ENST00000446011 156 ntBASIC5.5□□□□□ -1.53
RC3H1Q5TC82 AC020890.1-201ENST00000491837 504 ntBASIC5.5□□□□□ -1.53
RC3H1Q5TC82 HIGD1AP3-201ENST00000515857 278 ntBASIC5.5□□□□□ -1.53
RC3H1Q5TC82 ATP5F1P5-201ENST00000526403 760 ntBASIC5.5□□□□□ -1.53
RC3H1Q5TC82 MIR5692C2-201ENST00000577959 77 ntBASIC5.5□□□□□ -1.53
RC3H1Q5TC82 SRGNP1-201ENST00000603392 451 ntBASIC5.5□□□□□ -1.53
RC3H1Q5TC82 AC024220.1-201ENST00000603675 484 ntBASIC5.5□□□□□ -1.53
RC3H1Q5TC82 Y_RNA.778-201ENST00000620203 90 ntBASIC5.5□□□□□ -1.53
RC3H1Q5TC82 MIR4679-1-201ENST00000637619 75 ntBASIC5.5□□□□□ -1.53
RC3H1Q5TC82 OR8J3-204ENST00000642058 3806 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
RC3H1Q5TC82 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC5.5□□□□□ -1.53
RC3H1Q5TC82 RIF1-203ENST00000428287 7722 ntAPPRIS ALT2 TSL 1 (best) BASIC5.5□□□□□ -1.53
RC3H1Q5TC82 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
RC3H1Q5TC82 AC010332.2-201ENST00000613083 1904 ntBASIC5.5□□□□□ -1.53
RC3H1Q5TC82 GABRG1-201ENST00000295452 6785 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
RC3H1Q5TC82 SPAG5-AS1-202ENST00000424210 1551 ntTSL 2 BASIC5.5□□□□□ -1.53
RC3H1Q5TC82 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
RC3H1Q5TC82 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC5.5□□□□□ -1.53
RC3H1Q5TC82 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC5.5□□□□□ -1.53
RC3H1Q5TC82 ADAM29-201ENST00000359240 3325 ntAPPRIS P1 TSL 2 BASIC5.49□□□□□ -1.53
RC3H1Q5TC82 C15orf41-212ENST00000567389 2618 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
RC3H1Q5TC82 PTPN13-209ENST00000511467 8076 ntAPPRIS P4 TSL 2 BASIC5.49□□□□□ -1.53
RC3H1Q5TC82 MAPK10-286ENST00000641208 8747 ntBASIC5.49□□□□□ -1.53
RC3H1Q5TC82 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
RC3H1Q5TC82 SNORA71.3-201ENST00000362582 128 ntBASIC5.49□□□□□ -1.53
RC3H1Q5TC82 Y_RNA.71-201ENST00000362892 104 ntBASIC5.49□□□□□ -1.53
RC3H1Q5TC82 Y_RNA.218-201ENST00000364218 104 ntBASIC5.49□□□□□ -1.53
RC3H1Q5TC82 RNU6-818P-201ENST00000364837 108 ntBASIC5.49□□□□□ -1.53
RC3H1Q5TC82 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC5.49□□□□□ -1.53
RC3H1Q5TC82 Y_RNA.446-201ENST00000384178 104 ntBASIC5.49□□□□□ -1.53
RC3H1Q5TC82 Y_RNA.571-201ENST00000384753 98 ntBASIC5.49□□□□□ -1.53
RC3H1Q5TC82 AL357139.1-201ENST00000407792 426 ntBASIC5.49□□□□□ -1.53
RC3H1Q5TC82 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
RC3H1Q5TC82 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC5.49□□□□□ -1.53
RC3H1Q5TC82 AC073901.1-201ENST00000462471 408 ntBASIC5.49□□□□□ -1.53
RC3H1Q5TC82 RPL23AP45-201ENST00000476406 468 ntBASIC5.49□□□□□ -1.53
RC3H1Q5TC82 LINC01206-205ENST00000490001 949 ntTSL 5 BASIC5.49□□□□□ -1.53
RC3H1Q5TC82 AC146944.2-203ENST00000502493 354 ntBASIC5.49□□□□□ -1.53
RC3H1Q5TC82 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC5.49□□□□□ -1.53
RC3H1Q5TC82 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC5.49□□□□□ -1.53
RC3H1Q5TC82 AC113167.1-201ENST00000512941 570 ntTSL 4 BASIC5.49□□□□□ -1.53
RC3H1Q5TC82 AC139495.1-202ENST00000513164 354 ntBASIC5.49□□□□□ -1.53
RC3H1Q5TC82 RNU6-1315P-201ENST00000517187 99 ntBASIC5.49□□□□□ -1.53
RC3H1Q5TC82 AC026116.1-201ENST00000551729 474 ntTSL 3 BASIC5.49□□□□□ -1.53
RC3H1Q5TC82 AC008749.1-201ENST00000597650 306 ntBASIC5.49□□□□□ -1.53
RC3H1Q5TC82 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
RC3H1Q5TC82 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC5.49□□□□□ -1.53
RC3H1Q5TC82 SLC9C1-201ENST00000305815 4172 ntAPPRIS P3 TSL 2 BASIC5.49□□□□□ -1.53
RC3H1Q5TC82 RPGRIP1L-201ENST00000262135 8195 ntAPPRIS P3 TSL 5 BASIC5.49□□□□□ -1.53
RC3H1Q5TC82 RAG2-201ENST00000311485 2388 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
RC3H1Q5TC82 GALNT11-203ENST00000422997 2371 ntTSL 5 BASIC5.49□□□□□ -1.53
RC3H1Q5TC82 TMEM255A-202ENST00000371352 2879 ntTSL 2 BASIC5.49□□□□□ -1.53
RC3H1Q5TC82 TNRC6B-201ENST00000301923 15958 ntAPPRIS P3 TSL 5 BASIC5.48□□□□□ -1.53
RC3H1Q5TC82 LRRC63-203ENST00000595396 2327 ntAPPRIS P2 TSL 5 BASIC5.48□□□□□ -1.53
RC3H1Q5TC82 AC106871.1-201ENST00000568324 3102 ntBASIC5.48□□□□□ -1.53
RC3H1Q5TC82 UTS2B-201ENST00000340524 2395 ntAPPRIS P1 TSL 2 BASIC5.48□□□□□ -1.53
RC3H1Q5TC82 AC008079.2-201ENST00000623543 20396 ntBASIC5.48□□□□□ -1.53
RC3H1Q5TC82 C1orf112-202ENST00000359326 4002 ntAPPRIS P3 TSL 1 (best) BASIC5.48□□□□□ -1.53
RC3H1Q5TC82 RNU6-222P-201ENST00000362438 107 ntBASIC5.48□□□□□ -1.53
RC3H1Q5TC82 RNU6-227P-201ENST00000362865 103 ntBASIC5.48□□□□□ -1.53
RC3H1Q5TC82 RNU1-20P-201ENST00000363314 162 ntBASIC5.48□□□□□ -1.53
RC3H1Q5TC82 Y_RNA.123-201ENST00000363338 102 ntBASIC5.48□□□□□ -1.53
RC3H1Q5TC82 RNU6-1255P-201ENST00000363434 112 ntBASIC5.48□□□□□ -1.53
RC3H1Q5TC82 Y_RNA.136-201ENST00000363444 102 ntBASIC5.48□□□□□ -1.53
RC3H1Q5TC82 RNU6-151P-201ENST00000364158 107 ntBASIC5.48□□□□□ -1.53
RC3H1Q5TC82 RNU4-84P-201ENST00000364200 139 ntBASIC5.48□□□□□ -1.53
RC3H1Q5TC82 RNU6-384P-201ENST00000364900 104 ntBASIC5.48□□□□□ -1.53
RC3H1Q5TC82 Y_RNA.357-201ENST00000365487 109 ntBASIC5.48□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 106.1 ms