Protein–RNA interactions for Protein: P62312

LSM6, U6 snRNA-associated Sm-like protein LSm6, humanhuman

Known RBP Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6P62312 OR6C5P-201ENST00000452388 923 ntBASIC1.29□□□□□ -2.2
LSM6P62312 MTND2P30-201ENST00000456663 382 ntBASIC1.29□□□□□ -2.2
LSM6P62312 AC011005.2-201ENST00000487324 359 ntBASIC1.29□□□□□ -2.2
LSM6P62312 RPS15AP36-201ENST00000492022 382 ntBASIC1.29□□□□□ -2.2
LSM6P62312 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC1.29□□□□□ -2.2
LSM6P62312 RNU6-548P-201ENST00000517083 115 ntBASIC1.29□□□□□ -2.2
LSM6P62312 RNU6-586P-201ENST00000517265 104 ntBASIC1.29□□□□□ -2.2
LSM6P62312 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC1.29□□□□□ -2.2
LSM6P62312 SLC2A13P1-201ENST00000531560 322 ntBASIC1.29□□□□□ -2.2
LSM6P62312 CARD18-203ENST00000532895 422 ntTSL 2 BASIC1.29□□□□□ -2.2
LSM6P62312 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC1.29□□□□□ -2.2
LSM6P62312 OR6C7P-201ENST00000547875 934 ntBASIC1.29□□□□□ -2.2
LSM6P62312 AC005909.1-201ENST00000577835 755 ntTSL 3 BASIC1.29□□□□□ -2.2
LSM6P62312 AC004987.4-201ENST00000603383 338 ntBASIC1.29□□□□□ -2.2
LSM6P62312 RMST_6.1-201ENST00000611980 203 ntBASIC1.29□□□□□ -2.2
LSM6P62312 MIR7974-201ENST00000615835 79 ntBASIC1.29□□□□□ -2.2
LSM6P62312 AC241585.2-209ENST00000638217 143 ntBASIC1.29□□□□□ -2.2
LSM6P62312 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC1.29□□□□□ -2.2
LSM6P62312 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC1.28□□□□□ -2.2
LSM6P62312 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC1.28□□□□□ -2.2
LSM6P62312 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.28□□□□□ -2.2
LSM6P62312 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC1.28□□□□□ -2.2
LSM6P62312 Y_RNA.67-201ENST00000362870 100 ntBASIC1.28□□□□□ -2.2
LSM6P62312 SNORD115-3-201ENST00000363100 82 ntBASIC1.28□□□□□ -2.2
LSM6P62312 RNU1-42P-201ENST00000364033 160 ntBASIC1.28□□□□□ -2.2
LSM6P62312 MIR1323-201ENST00000408090 73 ntBASIC1.28□□□□□ -2.2
LSM6P62312 RN7SKP284-201ENST00000411002 343 ntBASIC1.28□□□□□ -2.2
LSM6P62312 LINC01934-201ENST00000414750 391 ntTSL 3 BASIC1.28□□□□□ -2.2
LSM6P62312 AL159990.1-201ENST00000415119 337 ntTSL 3 BASIC1.28□□□□□ -2.2
LSM6P62312 LINC01646-201ENST00000420522 682 ntTSL 3 BASIC1.28□□□□□ -2.2
LSM6P62312 SLC44A3-AS1-205ENST00000424505 612 ntBASIC1.28□□□□□ -2.2
LSM6P62312 MTCO3P46-201ENST00000425787 232 ntBASIC1.28□□□□□ -2.2
LSM6P62312 AL159990.2-201ENST00000436491 337 ntTSL 3 BASIC1.28□□□□□ -2.2
LSM6P62312 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC1.28□□□□□ -2.2
LSM6P62312 SNORD13-201ENST00000459299 104 ntBASIC1.28□□□□□ -2.2
LSM6P62312 AC104563.1-201ENST00000476147 376 ntBASIC1.28□□□□□ -2.2
LSM6P62312 AC116655.1-201ENST00000508324 901 ntBASIC1.28□□□□□ -2.2
LSM6P62312 AC097478.1-204ENST00000509723 547 ntTSL 3 BASIC1.28□□□□□ -2.2
LSM6P62312 RNU6-1183P-201ENST00000517054 60 ntBASIC1.28□□□□□ -2.2
LSM6P62312 AP004607.1-201ENST00000524456 203 ntBASIC1.28□□□□□ -2.2
LSM6P62312 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC1.28□□□□□ -2.2
LSM6P62312 AC093012.1-202ENST00000549403 582 ntBASIC1.28□□□□□ -2.2
LSM6P62312 AC005774.1-201ENST00000565247 567 ntTSL 4 BASIC1.28□□□□□ -2.2
LSM6P62312 MIR4422-201ENST00000581938 83 ntBASIC1.28□□□□□ -2.2
LSM6P62312 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC1.28□□□□□ -2.2
LSM6P62312 NDUFA8P1-201ENST00000605525 367 ntBASIC1.28□□□□□ -2.2
LSM6P62312 LINC02246-204ENST00000625278 740 ntTSL 5 BASIC1.28□□□□□ -2.2
LSM6P62312 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC1.28□□□□□ -2.2
LSM6P62312 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC1.27□□□□□ -2.21
LSM6P62312 OR5T3-201ENST00000303059 1023 ntBASIC1.27□□□□□ -2.21
LSM6P62312 RNU6-661P-201ENST00000362409 107 ntBASIC1.27□□□□□ -2.21
LSM6P62312 RNU6-611P-201ENST00000384276 104 ntBASIC1.27□□□□□ -2.21
LSM6P62312 RNU6-955P-201ENST00000410497 104 ntBASIC1.27□□□□□ -2.21
LSM6P62312 AL354695.1-201ENST00000427935 228 ntBASIC1.27□□□□□ -2.21
LSM6P62312 AC009299.3-202ENST00000445372 538 ntTSL 3 BASIC1.27□□□□□ -2.21
LSM6P62312 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC1.27□□□□□ -2.21
LSM6P62312 AC093809.1-201ENST00000509155 340 ntBASIC1.27□□□□□ -2.21
LSM6P62312 RNU6-583P-201ENST00000516012 92 ntBASIC1.27□□□□□ -2.21
LSM6P62312 RN7SKP258-201ENST00000517151 304 ntBASIC1.27□□□□□ -2.21
LSM6P62312 CA1-215ENST00000522389 551 ntTSL 3 BASIC1.27□□□□□ -2.21
LSM6P62312 CYCSP27-201ENST00000527643 293 ntBASIC1.27□□□□□ -2.21
LSM6P62312 AC135279.1-201ENST00000543493 504 ntBASIC1.27□□□□□ -2.21
LSM6P62312 ARL2BPP2-201ENST00000550907 489 ntBASIC1.27□□□□□ -2.21
LSM6P62312 AC122134.1-202ENST00000569111 1201 ntBASIC1.27□□□□□ -2.21
LSM6P62312 AC091132.5-202ENST00000587078 501 ntTSL 3 BASIC1.27□□□□□ -2.21
LSM6P62312 AL133445.2-201ENST00000611191 527 ntBASIC1.27□□□□□ -2.21
LSM6P62312 U6.99-201ENST00000637524 83 ntBASIC1.27□□□□□ -2.21
LSM6P62312 AL079343.1-201ENST00000572358 1771 ntBASIC1.26□□□□□ -2.21
LSM6P62312 TEX21P-201ENST00000447107 1476 ntBASIC1.26□□□□□ -2.21
LSM6P62312 HSFY1P1-202ENST00000425038 1381 ntTSL 1 (best) BASIC1.26□□□□□ -2.21
LSM6P62312 MTND4P21-201ENST00000453886 1357 ntBASIC1.26□□□□□ -2.21
LSM6P62312 RNU6-707P-201ENST00000364647 95 ntBASIC1.26□□□□□ -2.21
LSM6P62312 MIR150-201ENST00000385048 84 ntBASIC1.26□□□□□ -2.21
LSM6P62312 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC1.26□□□□□ -2.21
LSM6P62312 BTF3L4P2-201ENST00000392798 346 ntBASIC1.26□□□□□ -2.21
LSM6P62312 TOMM20P4-201ENST00000427861 435 ntBASIC1.26□□□□□ -2.21
LSM6P62312 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC1.26□□□□□ -2.21
LSM6P62312 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC1.26□□□□□ -2.21
LSM6P62312 RNU7-136P-201ENST00000458819 69 ntBASIC1.26□□□□□ -2.21
LSM6P62312 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC1.26□□□□□ -2.21
LSM6P62312 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC1.26□□□□□ -2.21
LSM6P62312 HMGB1P28-201ENST00000507778 552 ntBASIC1.26□□□□□ -2.21
LSM6P62312 MTCYBP16-201ENST00000509187 1129 ntBASIC1.26□□□□□ -2.21
LSM6P62312 AC005150.1-201ENST00000512831 628 ntTSL 2 BASIC1.26□□□□□ -2.21
LSM6P62312 MTCYBP43-201ENST00000513621 740 ntBASIC1.26□□□□□ -2.21
LSM6P62312 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC1.26□□□□□ -2.21
LSM6P62312 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC1.26□□□□□ -2.21
LSM6P62312 ELOC-204ENST00000519487 814 ntAPPRIS P1 TSL 2 BASIC1.26□□□□□ -2.21
LSM6P62312 AC010900.2-201ENST00000604508 210 ntBASIC1.26□□□□□ -2.21
LSM6P62312 AC099063.3-201ENST00000642066 185 ntBASIC1.26□□□□□ -2.21
LSM6P62312 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC1.25□□□□□ -2.21
LSM6P62312 RNU4-13P-201ENST00000364019 141 ntBASIC1.25□□□□□ -2.21
LSM6P62312 SNORD14D-201ENST00000384390 87 ntBASIC1.25□□□□□ -2.21
LSM6P62312 TRAPPC2P8-201ENST00000440676 396 ntBASIC1.25□□□□□ -2.21
LSM6P62312 SNRPGP13-201ENST00000442212 177 ntBASIC1.25□□□□□ -2.21
LSM6P62312 BRK1P2-201ENST00000442875 223 ntBASIC1.25□□□□□ -2.21
LSM6P62312 TRAPPC2P3-201ENST00000443200 321 ntBASIC1.25□□□□□ -2.21
LSM6P62312 AL365273.2-201ENST00000491114 492 ntAPPRIS P1 TSL 5 BASIC1.25□□□□□ -2.21
LSM6P62312 LINC02484-202ENST00000514877 546 ntTSL 3 BASIC1.25□□□□□ -2.21
LSM6P62312 RNU6-678P-201ENST00000516832 109 ntBASIC1.25□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 135.3 ms