Protein–RNA interactions for Protein: P61968

LMO4, LIM domain transcription factor LMO4, humanhuman

Predictions only

Length 165 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4P61968 AC236972.2-201ENST00000434979 310 ntBASIC2.6□□□□□ -1.99
LMO4P61968 PRPS1P1-201ENST00000445305 876 ntBASIC2.6□□□□□ -1.99
LMO4P61968 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC2.6□□□□□ -1.99
LMO4P61968 MRPS31P2-201ENST00000451581 518 ntBASIC2.6□□□□□ -1.99
LMO4P61968 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC2.6□□□□□ -1.99
LMO4P61968 RPL31P60-201ENST00000478450 367 ntBASIC2.6□□□□□ -1.99
LMO4P61968 HSPE1P6-201ENST00000479457 291 ntBASIC2.6□□□□□ -1.99
LMO4P61968 RPS15AP36-201ENST00000492022 382 ntBASIC2.6□□□□□ -1.99
LMO4P61968 AC135721.1-201ENST00000497954 479 ntBASIC2.6□□□□□ -1.99
LMO4P61968 MTND5P5-201ENST00000503764 376 ntBASIC2.6□□□□□ -1.99
LMO4P61968 AC091885.1-201ENST00000506658 268 ntBASIC2.6□□□□□ -1.99
LMO4P61968 CCDC34P1-201ENST00000507441 517 ntBASIC2.6□□□□□ -1.99
LMO4P61968 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC2.6□□□□□ -1.99
LMO4P61968 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
LMO4P61968 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC2.6□□□□□ -1.99
LMO4P61968 RNU6-1038P-201ENST00000516516 104 ntBASIC2.6□□□□□ -1.99
LMO4P61968 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC2.6□□□□□ -1.99
LMO4P61968 LARP7P3-201ENST00000579888 337 ntBASIC2.6□□□□□ -1.99
LMO4P61968 AC024619.4-201ENST00000580924 316 ntBASIC2.6□□□□□ -1.99
LMO4P61968 POLR3GP2-201ENST00000588366 668 ntBASIC2.6□□□□□ -1.99
LMO4P61968 BNIP3P25-201ENST00000596023 559 ntBASIC2.6□□□□□ -1.99
LMO4P61968 AL137843.1-201ENST00000605078 385 ntBASIC2.6□□□□□ -1.99
LMO4P61968 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC2.6□□□□□ -1.99
LMO4P61968 AL022345.1-201ENST00000607292 135 ntBASIC2.6□□□□□ -1.99
LMO4P61968 AC093732.2-201ENST00000607950 274 ntBASIC2.6□□□□□ -1.99
LMO4P61968 AC092807.2-201ENST00000609367 243 ntBASIC2.6□□□□□ -1.99
LMO4P61968 AP001486.3-201ENST00000615334 372 ntBASIC2.6□□□□□ -1.99
LMO4P61968 ATP5A1P2-202ENST00000616464 443 ntBASIC2.6□□□□□ -1.99
LMO4P61968 AC011155.2-201ENST00000623202 216 ntBASIC2.6□□□□□ -1.99
LMO4P61968 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
LMO4P61968 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
LMO4P61968 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC2.6□□□□□ -1.99
LMO4P61968 DDX10P1-201ENST00000448545 1933 ntBASIC2.6□□□□□ -1.99
LMO4P61968 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
LMO4P61968 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
LMO4P61968 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC2.59□□□□□ -1.99
LMO4P61968 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
LMO4P61968 SDAD1P2-201ENST00000441308 2028 ntBASIC2.59□□□□□ -1.99
LMO4P61968 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
LMO4P61968 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC2.59□□□□□ -1.99
LMO4P61968 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
LMO4P61968 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC2.59□□□□□ -1.99
LMO4P61968 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
LMO4P61968 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
LMO4P61968 Y_RNA.259-201ENST00000364619 101 ntBASIC2.59□□□□□ -1.99
LMO4P61968 Y_RNA.301-201ENST00000364990 103 ntBASIC2.59□□□□□ -1.99
LMO4P61968 Y_RNA.315-201ENST00000365117 102 ntBASIC2.59□□□□□ -1.99
LMO4P61968 RNU5E-6P-201ENST00000365574 115 ntBASIC2.59□□□□□ -1.99
LMO4P61968 Y_RNA.378-201ENST00000365652 113 ntBASIC2.59□□□□□ -1.99
LMO4P61968 Y_RNA.414-201ENST00000384011 101 ntBASIC2.59□□□□□ -1.99
LMO4P61968 RNU6-432P-201ENST00000384196 109 ntBASIC2.59□□□□□ -1.99
LMO4P61968 SNORA54-201ENST00000384281 123 ntBASIC2.59□□□□□ -1.99
LMO4P61968 RNU6-43P-201ENST00000384302 107 ntBASIC2.59□□□□□ -1.99
LMO4P61968 SNORA24.1-201ENST00000384401 135 ntBASIC2.59□□□□□ -1.99
LMO4P61968 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC2.59□□□□□ -1.99
LMO4P61968 Y_RNA.579-201ENST00000390939 94 ntBASIC2.59□□□□□ -1.99
LMO4P61968 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
LMO4P61968 EIF4EBP2P3-201ENST00000403144 334 ntBASIC2.59□□□□□ -1.99
LMO4P61968 RPL5P18-201ENST00000406671 891 ntBASIC2.59□□□□□ -1.99
LMO4P61968 RNU6-1077P-201ENST00000410506 102 ntBASIC2.59□□□□□ -1.99
LMO4P61968 COTL1P1-201ENST00000422309 375 ntBASIC2.59□□□□□ -1.99
LMO4P61968 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC2.59□□□□□ -1.99
LMO4P61968 ARF4P2-201ENST00000430209 526 ntBASIC2.59□□□□□ -1.99
LMO4P61968 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC2.59□□□□□ -1.99
LMO4P61968 HIGD1AP11-201ENST00000438361 280 ntBASIC2.59□□□□□ -1.99
LMO4P61968 BRK1P2-201ENST00000442875 223 ntBASIC2.59□□□□□ -1.99
LMO4P61968 AL590664.1-201ENST00000448065 339 ntBASIC2.59□□□□□ -1.99
LMO4P61968 SNORA59A-201ENST00000459326 152 ntBASIC2.59□□□□□ -1.99
LMO4P61968 AC083904.1-201ENST00000487828 231 ntBASIC2.59□□□□□ -1.99
LMO4P61968 AL049874.1-201ENST00000489560 388 ntBASIC2.59□□□□□ -1.99
LMO4P61968 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC2.59□□□□□ -1.99
LMO4P61968 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC2.59□□□□□ -1.99
LMO4P61968 RNU6-864P-201ENST00000516256 108 ntBASIC2.59□□□□□ -1.99
LMO4P61968 RNU6-327P-201ENST00000516270 127 ntBASIC2.59□□□□□ -1.99
LMO4P61968 RNU6-1045P-201ENST00000516321 107 ntBASIC2.59□□□□□ -1.99
LMO4P61968 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC2.59□□□□□ -1.99
LMO4P61968 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
LMO4P61968 MDM2-233ENST00000545204 398 ntTSL 5 BASIC2.59□□□□□ -1.99
LMO4P61968 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
LMO4P61968 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC2.59□□□□□ -1.99
LMO4P61968 FRG2DP-202ENST00000566967 323 ntBASIC2.59□□□□□ -1.99
LMO4P61968 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC2.59□□□□□ -1.99
LMO4P61968 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
LMO4P61968 uc_338.34-201ENST00000617467 174 ntBASIC2.59□□□□□ -1.99
LMO4P61968 AC025034.2-201ENST00000623264 286 ntBASIC2.59□□□□□ -1.99
LMO4P61968 AC006386.2-201ENST00000624491 75 ntBASIC2.59□□□□□ -1.99
LMO4P61968 AC012005.1-201ENST00000624575 75 ntBASIC2.59□□□□□ -1.99
LMO4P61968 SCARNA15.3-201ENST00000626315 122 ntBASIC2.59□□□□□ -1.99
LMO4P61968 SCARNA4.1-201ENST00000628597 123 ntBASIC2.59□□□□□ -1.99
LMO4P61968 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
LMO4P61968 AC010733.2-201ENST00000589496 5702 ntBASIC2.59□□□□□ -2
LMO4P61968 MTND4P14-201ENST00000435799 1354 ntBASIC2.59□□□□□ -2
LMO4P61968 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC2.59□□□□□ -2
LMO4P61968 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC2.59□□□□□ -2
LMO4P61968 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC2.58□□□□□ -2
LMO4P61968 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC2.58□□□□□ -2
LMO4P61968 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC2.58□□□□□ -2
LMO4P61968 TTN-204ENST00000360870 18218 ntTSL 5 BASIC2.58□□□□□ -2
LMO4P61968 SNORA71.1-201ENST00000364523 117 ntBASIC2.58□□□□□ -2
LMO4P61968 SNORD115-7-201ENST00000365306 82 ntBASIC2.58□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 105 ms