Protein–RNA interactions for Protein: P56747

CLDN6, Claudin-6, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN6P56747 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.11
CLDN6P56747 MIR1302-8-201ENST00000408342 128 ntBASIC1.84□□□□□ -2.11
CLDN6P56747 HMGB3P2-201ENST00000411913 584 ntBASIC1.84□□□□□ -2.11
CLDN6P56747 GPC5-IT1-201ENST00000416664 658 ntTSL 3 BASIC1.84□□□□□ -2.11
CLDN6P56747 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC1.84□□□□□ -2.11
CLDN6P56747 AC097463.2-201ENST00000421074 142 ntBASIC1.84□□□□□ -2.11
CLDN6P56747 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC1.84□□□□□ -2.11
CLDN6P56747 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.11
CLDN6P56747 AL139237.2-201ENST00000438454 493 ntTSL 3 BASIC1.84□□□□□ -2.11
CLDN6P56747 AL513412.1-201ENST00000445708 553 ntTSL 4 BASIC1.84□□□□□ -2.11
CLDN6P56747 RPL23AP7-203ENST00000449021 469 ntBASIC1.84□□□□□ -2.11
CLDN6P56747 OARD1-209ENST00000471367 401 ntTSL 2 BASIC1.84□□□□□ -2.11
CLDN6P56747 AC055731.1-201ENST00000474387 401 ntBASIC1.84□□□□□ -2.11
CLDN6P56747 RPS27P21-201ENST00000486977 252 ntBASIC1.84□□□□□ -2.11
CLDN6P56747 AC079804.2-201ENST00000490376 200 ntBASIC1.84□□□□□ -2.11
CLDN6P56747 AC084117.1-201ENST00000496975 270 ntTSL 5 BASIC1.84□□□□□ -2.11
CLDN6P56747 C4orf33-204ENST00000502887 1126 ntTSL 1 (best) BASIC1.84□□□□□ -2.11
CLDN6P56747 AC024579.1-201ENST00000503685 371 ntTSL 5 BASIC1.84□□□□□ -2.11
CLDN6P56747 HTN1-204ENST00000511674 623 ntAPPRIS P1 TSL 2 BASIC1.84□□□□□ -2.11
CLDN6P56747 AC010261.1-201ENST00000514411 457 ntTSL 5 BASIC1.84□□□□□ -2.11
CLDN6P56747 RNA5SP182-201ENST00000516064 82 ntBASIC1.84□□□□□ -2.11
CLDN6P56747 AC018541.1-202ENST00000518687 584 ntTSL 4 BASIC1.84□□□□□ -2.11
CLDN6P56747 CD44-AS1-201ENST00000528869 587 ntTSL 4 BASIC1.84□□□□□ -2.11
CLDN6P56747 FAM96A-206ENST00000559950 561 ntTSL 2 BASIC1.84□□□□□ -2.11
CLDN6P56747 MIR3126-201ENST00000577443 74 ntBASIC1.84□□□□□ -2.11
CLDN6P56747 AL355297.2-201ENST00000604792 129 ntBASIC1.84□□□□□ -2.11
CLDN6P56747 AC112220.3-201ENST00000605502 502 ntBASIC1.84□□□□□ -2.11
CLDN6P56747 AP001486.3-201ENST00000615334 372 ntBASIC1.84□□□□□ -2.11
CLDN6P56747 MIR8070-201ENST00000616510 88 ntBASIC1.84□□□□□ -2.11
CLDN6P56747 AC108479.2-201ENST00000617314 601 ntBASIC1.84□□□□□ -2.11
CLDN6P56747 AL596220.1-201ENST00000622121 542 ntTSL 4 BASIC1.84□□□□□ -2.11
CLDN6P56747 AP003400.5-201ENST00000624827 617 ntBASIC1.84□□□□□ -2.11
CLDN6P56747 UGP2-231ENST00000627474 264 ntTSL 5 BASIC1.84□□□□□ -2.11
CLDN6P56747 AC099654.8-201ENST00000637757 681 ntBASIC1.84□□□□□ -2.11
CLDN6P56747 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC1.84□□□□□ -2.12
CLDN6P56747 ATP8A2P2-201ENST00000437678 1568 ntBASIC1.84□□□□□ -2.12
CLDN6P56747 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC1.84□□□□□ -2.12
CLDN6P56747 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC1.83□□□□□ -2.12
CLDN6P56747 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC1.83□□□□□ -2.12
CLDN6P56747 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
CLDN6P56747 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
CLDN6P56747 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
CLDN6P56747 RNU5A-8P-201ENST00000364102 114 ntBASIC1.83□□□□□ -2.12
CLDN6P56747 RNU6-188P-201ENST00000364207 107 ntBASIC1.83□□□□□ -2.12
CLDN6P56747 RNA5SP160-201ENST00000364866 120 ntBASIC1.83□□□□□ -2.12
CLDN6P56747 RNA5SP138-201ENST00000365098 114 ntBASIC1.83□□□□□ -2.12
CLDN6P56747 RNU6-701P-201ENST00000384059 107 ntBASIC1.83□□□□□ -2.12
CLDN6P56747 RNU4-52P-201ENST00000384209 138 ntBASIC1.83□□□□□ -2.12
CLDN6P56747 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC1.83□□□□□ -2.12
CLDN6P56747 OR51A5P-201ENST00000415429 942 ntBASIC1.83□□□□□ -2.12
CLDN6P56747 VPS26BP1-201ENST00000417155 755 ntBASIC1.83□□□□□ -2.12
CLDN6P56747 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC1.83□□□□□ -2.12
CLDN6P56747 TAF9P1-201ENST00000445421 515 ntBASIC1.83□□□□□ -2.12
CLDN6P56747 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
CLDN6P56747 TAF9P2-201ENST00000454958 515 ntBASIC1.83□□□□□ -2.12
CLDN6P56747 AC108059.3-201ENST00000456388 214 ntBASIC1.83□□□□□ -2.12
CLDN6P56747 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC1.83□□□□□ -2.12
CLDN6P56747 RPL7P18-201ENST00000478965 734 ntBASIC1.83□□□□□ -2.12
CLDN6P56747 AC011005.2-201ENST00000487324 359 ntBASIC1.83□□□□□ -2.12
CLDN6P56747 AC117532.1-201ENST00000514638 323 ntBASIC1.83□□□□□ -2.12
CLDN6P56747 RNU6-143P-201ENST00000516942 93 ntBASIC1.83□□□□□ -2.12
CLDN6P56747 ACA59.2-201ENST00000517061 156 ntBASIC1.83□□□□□ -2.12
CLDN6P56747 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC1.83□□□□□ -2.12
CLDN6P56747 LINC01608-201ENST00000523557 544 ntTSL 4 BASIC1.83□□□□□ -2.12
CLDN6P56747 AP006587.4-201ENST00000526053 529 ntBASIC1.83□□□□□ -2.12
CLDN6P56747 MTCYBP23-201ENST00000558717 1102 ntBASIC1.83□□□□□ -2.12
CLDN6P56747 AC130371.1-204ENST00000576197 401 ntTSL 3 BASIC1.83□□□□□ -2.12
CLDN6P56747 AC012213.3-201ENST00000577199 777 ntBASIC1.83□□□□□ -2.12
CLDN6P56747 MIR4782-201ENST00000577987 79 ntBASIC1.83□□□□□ -2.12
CLDN6P56747 AP005057.1-201ENST00000583827 574 ntTSL 4 BASIC1.83□□□□□ -2.12
CLDN6P56747 BNIP3P23-201ENST00000599655 511 ntBASIC1.83□□□□□ -2.12
CLDN6P56747 AC097468.3-201ENST00000607956 456 ntBASIC1.83□□□□□ -2.12
CLDN6P56747 AC018645.2-201ENST00000609151 472 ntBASIC1.83□□□□□ -2.12
CLDN6P56747 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC1.83□□□□□ -2.12
CLDN6P56747 AC090970.3-201ENST00000612566 866 ntBASIC1.83□□□□□ -2.12
CLDN6P56747 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC1.83□□□□□ -2.12
CLDN6P56747 GPR171-203ENST00000617554 960 ntAPPRIS P1 BASIC1.83□□□□□ -2.12
CLDN6P56747 MIR5739-201ENST00000619803 80 ntBASIC1.83□□□□□ -2.12
CLDN6P56747 CDC27P3-201ENST00000635418 1910 ntBASIC1.83□□□□□ -2.12
CLDN6P56747 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC1.83□□□□□ -2.12
CLDN6P56747 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC1.82□□□□□ -2.12
CLDN6P56747 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC1.82□□□□□ -2.12
CLDN6P56747 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC1.82□□□□□ -2.12
CLDN6P56747 SNORA4.1-201ENST00000364263 144 ntBASIC1.82□□□□□ -2.12
CLDN6P56747 RNU6-1280P-201ENST00000365211 107 ntBASIC1.82□□□□□ -2.12
CLDN6P56747 Y_RNA.508-201ENST00000384502 114 ntBASIC1.82□□□□□ -2.12
CLDN6P56747 MIR1305-201ENST00000408300 86 ntBASIC1.82□□□□□ -2.12
CLDN6P56747 AL356379.1-201ENST00000414105 126 ntBASIC1.82□□□□□ -2.12
CLDN6P56747 EDDM3CP-201ENST00000415977 425 ntBASIC1.82□□□□□ -2.12
CLDN6P56747 EIF1AXP1-201ENST00000419267 435 ntBASIC1.82□□□□□ -2.12
CLDN6P56747 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC1.82□□□□□ -2.12
CLDN6P56747 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC1.82□□□□□ -2.12
CLDN6P56747 AC025038.1-201ENST00000433249 336 ntTSL 3 BASIC1.82□□□□□ -2.12
CLDN6P56747 MTND4P25-201ENST00000441039 533 ntBASIC1.82□□□□□ -2.12
CLDN6P56747 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC1.82□□□□□ -2.12
CLDN6P56747 AC009238.1-201ENST00000442165 424 ntBASIC1.82□□□□□ -2.12
CLDN6P56747 NEFMP1-201ENST00000443423 1006 ntBASIC1.82□□□□□ -2.12
CLDN6P56747 AC009237.6-201ENST00000446969 424 ntBASIC1.82□□□□□ -2.12
CLDN6P56747 CHODL-AS1-201ENST00000447175 1117 ntTSL 2 BASIC1.82□□□□□ -2.12
CLDN6P56747 ZNF736P4Y-201ENST00000454995 1243 ntBASIC1.82□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 326.2 ms