Protein–RNA interactions for Protein: P49238

CX3CR1, CX3C chemokine receptor 1, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CR1P49238 AL512286.1-201ENST00000439244 400 ntBASIC1.94□□□□□ -2.1
CX3CR1P49238 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC1.94□□□□□ -2.1
CX3CR1P49238 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC1.94□□□□□ -2.1
CX3CR1P49238 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC1.94□□□□□ -2.1
CX3CR1P49238 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC1.94□□□□□ -2.1
CX3CR1P49238 AC112771.1-201ENST00000463581 102 ntBASIC1.94□□□□□ -2.1
CX3CR1P49238 AC022616.6-201ENST00000520479 119 ntBASIC1.94□□□□□ -2.1
CX3CR1P49238 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC1.94□□□□□ -2.1
CX3CR1P49238 AP003122.3-201ENST00000526316 255 ntBASIC1.94□□□□□ -2.1
CX3CR1P49238 AC084851.1-201ENST00000529105 249 ntBASIC1.94□□□□□ -2.1
CX3CR1P49238 AP003122.4-201ENST00000530980 758 ntBASIC1.94□□□□□ -2.1
CX3CR1P49238 CYCSP26-201ENST00000534107 320 ntBASIC1.94□□□□□ -2.1
CX3CR1P49238 LRRC34P1-201ENST00000542742 915 ntBASIC1.94□□□□□ -2.1
CX3CR1P49238 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC1.94□□□□□ -2.1
CX3CR1P49238 AC104763.2-201ENST00000604179 382 ntBASIC1.94□□□□□ -2.1
CX3CR1P49238 AC018638.7-201ENST00000605836 1114 ntBASIC1.94□□□□□ -2.1
CX3CR1P49238 MIR6840-201ENST00000611937 71 ntBASIC1.94□□□□□ -2.1
CX3CR1P49238 AC004223.4-201ENST00000612426 332 ntBASIC1.94□□□□□ -2.1
CX3CR1P49238 AC009090.3-201ENST00000616553 565 ntBASIC1.94□□□□□ -2.1
CX3CR1P49238 AL589994.2-201ENST00000621124 579 ntBASIC1.94□□□□□ -2.1
CX3CR1P49238 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC1.94□□□□□ -2.1
CX3CR1P49238 AC243829.7-201ENST00000633081 225 ntBASIC1.94□□□□□ -2.1
CX3CR1P49238 AL512643.1-201ENST00000635735 524 ntBASIC1.94□□□□□ -2.1
CX3CR1P49238 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC1.94□□□□□ -2.1
CX3CR1P49238 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC1.94□□□□□ -2.1
CX3CR1P49238 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC1.94□□□□□ -2.1
CX3CR1P49238 VIM-AS1-201ENST00000437232 1351 ntTSL 2 BASIC1.94□□□□□ -2.1
CX3CR1P49238 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
CX3CR1P49238 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC1.93□□□□□ -2.1
CX3CR1P49238 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC1.93□□□□□ -2.1
CX3CR1P49238 RNU6-511P-201ENST00000363496 107 ntBASIC1.93□□□□□ -2.1
CX3CR1P49238 SMIM11P1-201ENST00000369586 178 ntBASIC1.93□□□□□ -2.1
CX3CR1P49238 SNORA6-201ENST00000384033 151 ntBASIC1.93□□□□□ -2.1
CX3CR1P49238 SNORA51.11-201ENST00000384442 131 ntBASIC1.93□□□□□ -2.1
CX3CR1P49238 FCF1P10-201ENST00000407590 479 ntBASIC1.93□□□□□ -2.1
CX3CR1P49238 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC1.93□□□□□ -2.1
CX3CR1P49238 TEX41-202ENST00000414256 604 ntTSL 5 BASIC1.93□□□□□ -2.1
CX3CR1P49238 AC004543.1-201ENST00000418764 369 ntTSL 5 BASIC1.93□□□□□ -2.1
CX3CR1P49238 AC005005.2-201ENST00000420779 380 ntBASIC1.93□□□□□ -2.1
CX3CR1P49238 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC1.93□□□□□ -2.1
CX3CR1P49238 AC025038.1-201ENST00000433249 336 ntTSL 3 BASIC1.93□□□□□ -2.1
CX3CR1P49238 AC023590.1-204ENST00000434023 431 ntTSL 5 BASIC1.93□□□□□ -2.1
CX3CR1P49238 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC1.93□□□□□ -2.1
CX3CR1P49238 LINC01069-201ENST00000452933 546 ntTSL 5 BASIC1.93□□□□□ -2.1
CX3CR1P49238 RNU6-953P-201ENST00000459154 107 ntBASIC1.93□□□□□ -2.1
CX3CR1P49238 AL049873.1-201ENST00000480540 376 ntBASIC1.93□□□□□ -2.1
CX3CR1P49238 MTND1P3-201ENST00000484956 952 ntBASIC1.93□□□□□ -2.1
CX3CR1P49238 AC005178.1-201ENST00000508392 440 ntBASIC1.93□□□□□ -2.1
CX3CR1P49238 AF131216.2-201ENST00000512316 564 ntBASIC1.93□□□□□ -2.1
CX3CR1P49238 SNORA3.4-201ENST00000515969 96 ntBASIC1.93□□□□□ -2.1
CX3CR1P49238 RNU6-201P-201ENST00000517100 61 ntBASIC1.93□□□□□ -2.1
CX3CR1P49238 AP003181.2-201ENST00000528941 181 ntBASIC1.93□□□□□ -2.1
CX3CR1P49238 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC1.93□□□□□ -2.1
CX3CR1P49238 AC012378.1-201ENST00000561155 364 ntTSL 3 BASIC1.93□□□□□ -2.1
CX3CR1P49238 AC012435.1-202ENST00000568772 240 ntBASIC1.93□□□□□ -2.1
CX3CR1P49238 LRRC37A5P-203ENST00000580181 585 ntBASIC1.93□□□□□ -2.1
CX3CR1P49238 WISP1-OT1-201ENST00000602893 642 ntBASIC1.93□□□□□ -2.1
CX3CR1P49238 AL670379.6-201ENST00000603753 252 ntBASIC1.93□□□□□ -2.1
CX3CR1P49238 AL670379.11-201ENST00000604059 253 ntBASIC1.93□□□□□ -2.1
CX3CR1P49238 AC008162.1-201ENST00000604718 254 ntBASIC1.93□□□□□ -2.1
CX3CR1P49238 AL670379.1-201ENST00000604752 252 ntBASIC1.93□□□□□ -2.1
CX3CR1P49238 AL355297.2-201ENST00000604792 129 ntBASIC1.93□□□□□ -2.1
CX3CR1P49238 AL670379.5-201ENST00000605253 252 ntBASIC1.93□□□□□ -2.1
CX3CR1P49238 AL670379.12-201ENST00000605291 253 ntBASIC1.93□□□□□ -2.1
CX3CR1P49238 AL670379.8-201ENST00000605353 252 ntBASIC1.93□□□□□ -2.1
CX3CR1P49238 AL670379.7-201ENST00000605823 252 ntBASIC1.93□□□□□ -2.1
CX3CR1P49238 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC1.93□□□□□ -2.1
CX3CR1P49238 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC1.93□□□□□ -2.1
CX3CR1P49238 U4atac.1-201ENST00000618345 95 ntBASIC1.93□□□□□ -2.1
CX3CR1P49238 MIR5739-201ENST00000619803 80 ntBASIC1.93□□□□□ -2.1
CX3CR1P49238 AC009831.4-201ENST00000620744 325 ntBASIC1.93□□□□□ -2.1
CX3CR1P49238 MIR6132-201ENST00000622083 109 ntBASIC1.93□□□□□ -2.1
CX3CR1P49238 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC1.93□□□□□ -2.1
CX3CR1P49238 TEX21P-201ENST00000447107 1476 ntBASIC1.93□□□□□ -2.1
CX3CR1P49238 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC1.93□□□□□ -2.1
CX3CR1P49238 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC1.93□□□□□ -2.1
CX3CR1P49238 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
CX3CR1P49238 DLEU2_6.3-201ENST00000340052 136 ntBASIC1.92□□□□□ -2.1
CX3CR1P49238 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
CX3CR1P49238 RNA5SP289-201ENST00000362332 137 ntBASIC1.92□□□□□ -2.1
CX3CR1P49238 HMGB3P2-201ENST00000411913 584 ntBASIC1.92□□□□□ -2.1
CX3CR1P49238 HIGD1AP2-201ENST00000446367 280 ntBASIC1.92□□□□□ -2.1
CX3CR1P49238 AF127577.5-201ENST00000449746 446 ntTSL 3 BASIC1.92□□□□□ -2.1
CX3CR1P49238 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC1.92□□□□□ -2.1
CX3CR1P49238 AC023194.1-201ENST00000493084 308 ntBASIC1.92□□□□□ -2.1
CX3CR1P49238 CKS1BP2-201ENST00000497342 240 ntBASIC1.92□□□□□ -2.1
CX3CR1P49238 LAMTOR3P2-201ENST00000504479 232 ntBASIC1.92□□□□□ -2.1
CX3CR1P49238 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC1.92□□□□□ -2.1
CX3CR1P49238 RNU6-678P-201ENST00000516832 109 ntBASIC1.92□□□□□ -2.1
CX3CR1P49238 SNORA31.19-201ENST00000517079 126 ntBASIC1.92□□□□□ -2.1
CX3CR1P49238 AC093012.1-201ENST00000552999 446 ntTSL 3 BASIC1.92□□□□□ -2.1
CX3CR1P49238 AC008015.1-201ENST00000555505 465 ntBASIC1.92□□□□□ -2.1
CX3CR1P49238 AC002400.1-201ENST00000569310 726 ntBASIC1.92□□□□□ -2.1
CX3CR1P49238 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC1.92□□□□□ -2.1
CX3CR1P49238 AC099566.1-211ENST00000595188 737 ntTSL 5 BASIC1.92□□□□□ -2.1
CX3CR1P49238 AC025165.5-201ENST00000602802 578 ntBASIC1.92□□□□□ -2.1
CX3CR1P49238 AP001981.2-201ENST00000603241 418 ntBASIC1.92□□□□□ -2.1
CX3CR1P49238 AL360219.1-201ENST00000610230 366 ntBASIC1.92□□□□□ -2.1
CX3CR1P49238 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC1.92□□□□□ -2.1
CX3CR1P49238 AC027807.2-201ENST00000616099 408 ntBASIC1.92□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 92.5 ms