Protein–RNA interactions for Protein: P43378

PTPN9, Tyrosine-protein phosphatase non-receptor type 9, humanhuman

Predictions only

Length 593 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9P43378 AC010525.2-201ENST00000590920 195 ntBASIC3.21□□□□□ -1.9
PTPN9P43378 AC006504.8-201ENST00000621046 635 ntBASIC3.21□□□□□ -1.9
PTPN9P43378 AC006111.3-201ENST00000622137 383 ntBASIC3.21□□□□□ -1.9
PTPN9P43378 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC3.21□□□□□ -1.9
PTPN9P43378 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC3.21□□□□□ -1.9
PTPN9P43378 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
PTPN9P43378 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC3.21□□□□□ -1.9
PTPN9P43378 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
PTPN9P43378 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC3.2□□□□□ -1.9
PTPN9P43378 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
PTPN9P43378 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC3.2□□□□□ -1.9
PTPN9P43378 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.2□□□□□ -1.9
PTPN9P43378 AL035425.3-201ENST00000564206 4996 ntBASIC3.2□□□□□ -1.9
PTPN9P43378 FTLP6-201ENST00000355274 422 ntBASIC3.2□□□□□ -1.9
PTPN9P43378 Y_RNA.33-201ENST00000362591 102 ntBASIC3.2□□□□□ -1.9
PTPN9P43378 SNORA38.1-201ENST00000364172 131 ntBASIC3.2□□□□□ -1.9
PTPN9P43378 RNU4-20P-201ENST00000365601 151 ntBASIC3.2□□□□□ -1.9
PTPN9P43378 RNU6-434P-201ENST00000384376 107 ntBASIC3.2□□□□□ -1.9
PTPN9P43378 SNORD67-201ENST00000390833 111 ntBASIC3.2□□□□□ -1.9
PTPN9P43378 MIR888-201ENST00000401186 77 ntBASIC3.2□□□□□ -1.9
PTPN9P43378 RNU6-1077P-201ENST00000410506 102 ntBASIC3.2□□□□□ -1.9
PTPN9P43378 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC3.2□□□□□ -1.9
PTPN9P43378 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC3.2□□□□□ -1.9
PTPN9P43378 AL669831.1-202ENST00000428504 417 ntBASIC3.2□□□□□ -1.9
PTPN9P43378 GTF2IP13-201ENST00000438487 386 ntBASIC3.2□□□□□ -1.9
PTPN9P43378 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC3.2□□□□□ -1.9
PTPN9P43378 RPS15AP27-201ENST00000449183 343 ntBASIC3.2□□□□□ -1.9
PTPN9P43378 CECR9-201ENST00000453421 199 ntBASIC3.2□□□□□ -1.9
PTPN9P43378 SCARNA18-201ENST00000459004 134 ntBASIC3.2□□□□□ -1.9
PTPN9P43378 RN7SL20P-201ENST00000488827 297 ntBASIC3.2□□□□□ -1.9
PTPN9P43378 MTCO3P9-201ENST00000506989 781 ntBASIC3.2□□□□□ -1.9
PTPN9P43378 AC006445.2-201ENST00000510061 472 ntBASIC3.2□□□□□ -1.9
PTPN9P43378 AC074344.1-201ENST00000512823 224 ntBASIC3.2□□□□□ -1.9
PTPN9P43378 RNA5SP165-201ENST00000517142 115 ntBASIC3.2□□□□□ -1.9
PTPN9P43378 AC078814.3-201ENST00000553036 491 ntBASIC3.2□□□□□ -1.9
PTPN9P43378 AL035413.2-201ENST00000604801 525 ntBASIC3.2□□□□□ -1.9
PTPN9P43378 AC004805.2-201ENST00000605382 482 ntBASIC3.2□□□□□ -1.9
PTPN9P43378 RNU6-89P-201ENST00000606519 100 ntBASIC3.2□□□□□ -1.9
PTPN9P43378 AC096577.2-201ENST00000611455 153 ntBASIC3.2□□□□□ -1.9
PTPN9P43378 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC3.2□□□□□ -1.9
PTPN9P43378 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC3.2□□□□□ -1.9
PTPN9P43378 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC3.2□□□□□ -1.9
PTPN9P43378 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
PTPN9P43378 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC3.2□□□□□ -1.9
PTPN9P43378 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC3.19□□□□□ -1.9
PTPN9P43378 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
PTPN9P43378 RNU4-66P-201ENST00000365199 138 ntBASIC3.19□□□□□ -1.9
PTPN9P43378 RNU6-715P-201ENST00000365204 103 ntBASIC3.19□□□□□ -1.9
PTPN9P43378 SNORA54-201ENST00000384281 123 ntBASIC3.19□□□□□ -1.9
PTPN9P43378 RNU6-393P-201ENST00000384475 107 ntBASIC3.19□□□□□ -1.9
PTPN9P43378 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC3.19□□□□□ -1.9
PTPN9P43378 RPL7P10-201ENST00000417407 739 ntBASIC3.19□□□□□ -1.9
PTPN9P43378 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC3.19□□□□□ -1.9
PTPN9P43378 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC3.19□□□□□ -1.9
PTPN9P43378 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC3.19□□□□□ -1.9
PTPN9P43378 MYL8P-204ENST00000431574 518 ntBASIC3.19□□□□□ -1.9
PTPN9P43378 BRK1P2-201ENST00000442875 223 ntBASIC3.19□□□□□ -1.9
PTPN9P43378 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC3.19□□□□□ -1.9
PTPN9P43378 BX510359.1-201ENST00000456973 237 ntBASIC3.19□□□□□ -1.9
PTPN9P43378 HMGN2P26-201ENST00000463169 339 ntBASIC3.19□□□□□ -1.9
PTPN9P43378 RPL21P99-201ENST00000480369 423 ntBASIC3.19□□□□□ -1.9
PTPN9P43378 RN7SL283P-201ENST00000489055 303 ntBASIC3.19□□□□□ -1.9
PTPN9P43378 AC006445.1-201ENST00000491925 405 ntBASIC3.19□□□□□ -1.9
PTPN9P43378 Y_RNA.654-201ENST00000497848 106 ntBASIC3.19□□□□□ -1.9
PTPN9P43378 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC3.19□□□□□ -1.9
PTPN9P43378 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
PTPN9P43378 AC008716.1-201ENST00000511084 513 ntBASIC3.19□□□□□ -1.9
PTPN9P43378 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC3.19□□□□□ -1.9
PTPN9P43378 CENPUP1-201ENST00000526649 1202 ntBASIC3.19□□□□□ -1.9
PTPN9P43378 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC3.19□□□□□ -1.9
PTPN9P43378 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC3.19□□□□□ -1.9
PTPN9P43378 AC106782.4-201ENST00000568264 210 ntBASIC3.19□□□□□ -1.9
PTPN9P43378 MIR4506-201ENST00000584693 77 ntBASIC3.19□□□□□ -1.9
PTPN9P43378 AL355598.1-201ENST00000604169 202 ntBASIC3.19□□□□□ -1.9
PTPN9P43378 HSPE1P7-201ENST00000604681 321 ntBASIC3.19□□□□□ -1.9
PTPN9P43378 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC3.19□□□□□ -1.9
PTPN9P43378 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC3.19□□□□□ -1.9
PTPN9P43378 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
PTPN9P43378 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC3.19□□□□□ -1.9
PTPN9P43378 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
PTPN9P43378 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
PTPN9P43378 AC073346.2-201ENST00000624724 2058 ntBASIC3.18□□□□□ -1.9
PTPN9P43378 MIR208A-201ENST00000362287 71 ntBASIC3.18□□□□□ -1.9
PTPN9P43378 U3.12-201ENST00000364498 214 ntBASIC3.18□□□□□ -1.9
PTPN9P43378 CD3D-202ENST00000392884 476 ntTSL 2 BASIC3.18□□□□□ -1.9
PTPN9P43378 RN7SKP220-201ENST00000410611 288 ntBASIC3.18□□□□□ -1.9
PTPN9P43378 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC3.18□□□□□ -1.9
PTPN9P43378 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC3.18□□□□□ -1.9
PTPN9P43378 AC245054.2-201ENST00000415639 319 ntBASIC3.18□□□□□ -1.9
PTPN9P43378 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC3.18□□□□□ -1.9
PTPN9P43378 RPL30P16-201ENST00000419341 429 ntBASIC3.18□□□□□ -1.9
PTPN9P43378 MTND4LP11-201ENST00000422184 280 ntBASIC3.18□□□□□ -1.9
PTPN9P43378 NDUFB1P2-201ENST00000449477 176 ntBASIC3.18□□□□□ -1.9
PTPN9P43378 UQCRHP3-201ENST00000451503 251 ntBASIC3.18□□□□□ -1.9
PTPN9P43378 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC3.18□□□□□ -1.9
PTPN9P43378 AP000852.1-201ENST00000472460 573 ntBASIC3.18□□□□□ -1.9
PTPN9P43378 MTCYBP18-201ENST00000501056 747 ntBASIC3.18□□□□□ -1.9
PTPN9P43378 CCDC34P1-201ENST00000507441 517 ntBASIC3.18□□□□□ -1.9
PTPN9P43378 SNORA31.1-201ENST00000515993 133 ntBASIC3.18□□□□□ -1.9
PTPN9P43378 SNORA31.5-201ENST00000516190 133 ntBASIC3.18□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 102.2 ms