Protein–RNA interactions for Protein: P35453

HOXD13, Homeobox protein Hox-D13, humanhuman

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD13P35453 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC2.98□□□□□ -1.93
HOXD13P35453 AC107626.1-201ENST00000471084 183 ntBASIC2.98□□□□□ -1.93
HOXD13P35453 RPL9P33-201ENST00000484311 566 ntBASIC2.98□□□□□ -1.93
HOXD13P35453 HMGB1P30-201ENST00000492455 606 ntBASIC2.98□□□□□ -1.93
HOXD13P35453 AC079382.1-201ENST00000493346 557 ntBASIC2.98□□□□□ -1.93
HOXD13P35453 AC097462.2-201ENST00000504623 481 ntBASIC2.98□□□□□ -1.93
HOXD13P35453 AC116655.1-201ENST00000508324 901 ntBASIC2.98□□□□□ -1.93
HOXD13P35453 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC2.98□□□□□ -1.93
HOXD13P35453 SCARNA17.1-201ENST00000516211 143 ntBASIC2.98□□□□□ -1.93
HOXD13P35453 RNU6-581P-201ENST00000516214 105 ntBASIC2.98□□□□□ -1.93
HOXD13P35453 SCARNA17.2-201ENST00000516334 143 ntBASIC2.98□□□□□ -1.93
HOXD13P35453 SNORA9.3-201ENST00000516383 129 ntBASIC2.98□□□□□ -1.93
HOXD13P35453 OR5BN1P-201ENST00000532955 829 ntBASIC2.98□□□□□ -1.93
HOXD13P35453 AL136146.2-201ENST00000534594 494 ntTSL 2 BASIC2.98□□□□□ -1.93
HOXD13P35453 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC2.98□□□□□ -1.93
HOXD13P35453 SUB1P2-201ENST00000556401 297 ntBASIC2.98□□□□□ -1.93
HOXD13P35453 NDUFAF4P1-201ENST00000559425 519 ntBASIC2.98□□□□□ -1.93
HOXD13P35453 MIR3611-201ENST00000584484 83 ntBASIC2.98□□□□□ -1.93
HOXD13P35453 OR1M4P-201ENST00000589199 287 ntBASIC2.98□□□□□ -1.93
HOXD13P35453 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC2.98□□□□□ -1.93
HOXD13P35453 AL589743.7-201ENST00000612637 233 ntBASIC2.98□□□□□ -1.93
HOXD13P35453 SCARNA17.4-201ENST00000614296 143 ntBASIC2.98□□□□□ -1.93
HOXD13P35453 AP001486.3-201ENST00000615334 372 ntBASIC2.98□□□□□ -1.93
HOXD13P35453 GPR171-203ENST00000617554 960 ntAPPRIS P1 BASIC2.98□□□□□ -1.93
HOXD13P35453 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
HOXD13P35453 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
HOXD13P35453 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
HOXD13P35453 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
HOXD13P35453 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
HOXD13P35453 RNU6-166P-201ENST00000384371 107 ntBASIC2.97□□□□□ -1.93
HOXD13P35453 MIR1-2-201ENST00000384961 85 ntBASIC2.97□□□□□ -1.93
HOXD13P35453 Y_RNA.623-201ENST00000411128 95 ntBASIC2.97□□□□□ -1.93
HOXD13P35453 OR6C66P-201ENST00000414917 930 ntBASIC2.97□□□□□ -1.93
HOXD13P35453 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC2.97□□□□□ -1.93
HOXD13P35453 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
HOXD13P35453 TOMM20P4-201ENST00000427861 435 ntBASIC2.97□□□□□ -1.93
HOXD13P35453 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC2.97□□□□□ -1.93
HOXD13P35453 MYL8P-204ENST00000431574 518 ntBASIC2.97□□□□□ -1.93
HOXD13P35453 AC105272.1-201ENST00000438604 198 ntBASIC2.97□□□□□ -1.93
HOXD13P35453 RPL39P40-201ENST00000445481 146 ntBASIC2.97□□□□□ -1.93
HOXD13P35453 MRPL50P4-201ENST00000446432 475 ntBASIC2.97□□□□□ -1.93
HOXD13P35453 AC132479.1-201ENST00000449160 144 ntBASIC2.97□□□□□ -1.93
HOXD13P35453 NDUFB1P2-201ENST00000449477 176 ntBASIC2.97□□□□□ -1.93
HOXD13P35453 AL583843.1-201ENST00000456070 346 ntBASIC2.97□□□□□ -1.93
HOXD13P35453 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC2.97□□□□□ -1.93
HOXD13P35453 RPS3AP17-201ENST00000472594 777 ntBASIC2.97□□□□□ -1.93
HOXD13P35453 FSBP-201ENST00000481490 1158 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
HOXD13P35453 RN7SL297P-201ENST00000483161 293 ntBASIC2.97□□□□□ -1.93
HOXD13P35453 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC2.97□□□□□ -1.93
HOXD13P35453 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC2.97□□□□□ -1.93
HOXD13P35453 RNA5SP503-201ENST00000517047 117 ntBASIC2.97□□□□□ -1.93
HOXD13P35453 OR5AQ1P-201ENST00000527596 927 ntBASIC2.97□□□□□ -1.93
HOXD13P35453 DEFB131E-202ENST00000602581 683 ntBASIC2.97□□□□□ -1.93
HOXD13P35453 AP000787.2-201ENST00000604432 568 ntBASIC2.97□□□□□ -1.93
HOXD13P35453 AC097065.2-201ENST00000608159 533 ntBASIC2.97□□□□□ -1.93
HOXD13P35453 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC2.97□□□□□ -1.93
HOXD13P35453 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC2.97□□□□□ -1.93
HOXD13P35453 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC2.97□□□□□ -1.93
HOXD13P35453 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC2.97□□□□□ -1.93
HOXD13P35453 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
HOXD13P35453 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
HOXD13P35453 AC007336.1-201ENST00000576365 3828 ntBASIC2.97□□□□□ -1.93
HOXD13P35453 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
HOXD13P35453 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
HOXD13P35453 DLEU2_6.3-201ENST00000340052 136 ntBASIC2.96□□□□□ -1.94
HOXD13P35453 RNU6-1120P-201ENST00000362988 108 ntBASIC2.96□□□□□ -1.94
HOXD13P35453 RNU6-898P-201ENST00000365627 104 ntBASIC2.96□□□□□ -1.94
HOXD13P35453 Z98749.2-208ENST00000381646 500 ntBASIC2.96□□□□□ -1.94
HOXD13P35453 RNU6-748P-201ENST00000384648 107 ntBASIC2.96□□□□□ -1.94
HOXD13P35453 RNU6-1179P-201ENST00000384667 107 ntBASIC2.96□□□□□ -1.94
HOXD13P35453 AC096664.2-201ENST00000411843 406 ntBASIC2.96□□□□□ -1.94
HOXD13P35453 RPS27L-202ENST00000411926 528 ntTSL 3 BASIC2.96□□□□□ -1.94
HOXD13P35453 AL365338.1-201ENST00000422282 858 ntBASIC2.96□□□□□ -1.94
HOXD13P35453 AC025750.2-201ENST00000442609 450 ntBASIC2.96□□□□□ -1.94
HOXD13P35453 RPS3AP14-201ENST00000483907 780 ntBASIC2.96□□□□□ -1.94
HOXD13P35453 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC2.96□□□□□ -1.94
HOXD13P35453 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC2.96□□□□□ -1.94
HOXD13P35453 AC008716.1-201ENST00000511084 513 ntBASIC2.96□□□□□ -1.94
HOXD13P35453 AC112206.3-201ENST00000514578 389 ntBASIC2.96□□□□□ -1.94
HOXD13P35453 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
HOXD13P35453 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC2.96□□□□□ -1.94
HOXD13P35453 MIR4775-201ENST00000581168 75 ntBASIC2.96□□□□□ -1.94
HOXD13P35453 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC2.96□□□□□ -1.94
HOXD13P35453 AC098614.4-201ENST00000607601 462 ntBASIC2.96□□□□□ -1.94
HOXD13P35453 DLEU2_6.2-201ENST00000620994 136 ntBASIC2.96□□□□□ -1.94
HOXD13P35453 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC2.96□□□□□ -1.94
HOXD13P35453 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC2.96□□□□□ -1.94
HOXD13P35453 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC2.96□□□□□ -1.94
HOXD13P35453 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
HOXD13P35453 AC093536.2-201ENST00000565257 1406 ntBASIC2.95□□□□□ -1.94
HOXD13P35453 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC2.95□□□□□ -1.94
HOXD13P35453 RNU6-116P-201ENST00000384042 109 ntBASIC2.95□□□□□ -1.94
HOXD13P35453 RNU6-606P-201ENST00000384721 111 ntBASIC2.95□□□□□ -1.94
HOXD13P35453 MIR483-201ENST00000385070 76 ntBASIC2.95□□□□□ -1.94
HOXD13P35453 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC2.95□□□□□ -1.94
HOXD13P35453 AC092427.1-202ENST00000430569 476 ntBASIC2.95□□□□□ -1.94
HOXD13P35453 AC018693.1-201ENST00000442829 550 ntTSL 4 BASIC2.95□□□□□ -1.94
HOXD13P35453 MTND1P18-201ENST00000448191 573 ntBASIC2.95□□□□□ -1.94
HOXD13P35453 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC2.95□□□□□ -1.94
HOXD13P35453 AC006026.2-201ENST00000457376 180 ntBASIC2.95□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 90.5 ms