Protein–RNA interactions for Protein: P29973

CNGA1, cGMP-gated cation channel alpha-1, humanhuman

Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA1P29973 SNORA31.5-201ENST00000516190 133 ntBASIC4.05□□□□□ -1.76
CNGA1P29973 RNU6-1069P-201ENST00000516612 133 ntBASIC4.05□□□□□ -1.76
CNGA1P29973 AC012493.2-201ENST00000595083 291 ntBASIC4.05□□□□□ -1.76
CNGA1P29973 AC002044.1-201ENST00000606707 158 ntBASIC4.05□□□□□ -1.76
CNGA1P29973 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
CNGA1P29973 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
CNGA1P29973 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC4.05□□□□□ -1.76
CNGA1P29973 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC4.05□□□□□ -1.76
CNGA1P29973 PLCE1P1-201ENST00000622094 305 ntBASIC4.05□□□□□ -1.76
CNGA1P29973 MTRNR2L10-201ENST00000545075 1530 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
CNGA1P29973 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
CNGA1P29973 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
CNGA1P29973 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
CNGA1P29973 AC010680.1-201ENST00000590024 3590 ntBASIC4.04□□□□□ -1.76
CNGA1P29973 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC4.04□□□□□ -1.76
CNGA1P29973 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
CNGA1P29973 Y_RNA.166-201ENST00000363730 102 ntBASIC4.04□□□□□ -1.76
CNGA1P29973 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
CNGA1P29973 RNU6-510P-201ENST00000391239 108 ntBASIC4.04□□□□□ -1.76
CNGA1P29973 NDUFS5P4-201ENST00000412983 318 ntBASIC4.04□□□□□ -1.76
CNGA1P29973 AL353729.1-201ENST00000425044 720 ntBASIC4.04□□□□□ -1.76
CNGA1P29973 RPL35AP12-201ENST00000425362 338 ntBASIC4.04□□□□□ -1.76
CNGA1P29973 HMGN2P20-201ENST00000437531 273 ntBASIC4.04□□□□□ -1.76
CNGA1P29973 AC117503.1-201ENST00000472241 394 ntBASIC4.04□□□□□ -1.76
CNGA1P29973 AC091951.2-201ENST00000500762 203 ntBASIC4.04□□□□□ -1.76
CNGA1P29973 AC008628.2-201ENST00000502605 298 ntBASIC4.04□□□□□ -1.76
CNGA1P29973 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC4.04□□□□□ -1.76
CNGA1P29973 TBCAP3-201ENST00000512475 312 ntBASIC4.04□□□□□ -1.76
CNGA1P29973 RN7SKP256-201ENST00000517201 314 ntBASIC4.04□□□□□ -1.76
CNGA1P29973 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC4.04□□□□□ -1.76
CNGA1P29973 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC4.04□□□□□ -1.76
CNGA1P29973 AP000763.2-201ENST00000540641 163 ntBASIC4.04□□□□□ -1.76
CNGA1P29973 AP000786.1-201ENST00000541092 581 ntTSL 4 BASIC4.04□□□□□ -1.76
CNGA1P29973 APAF1-207ENST00000547743 651 ntTSL 3 BASIC4.04□□□□□ -1.76
CNGA1P29973 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC4.04□□□□□ -1.76
CNGA1P29973 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC4.04□□□□□ -1.76
CNGA1P29973 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC4.04□□□□□ -1.76
CNGA1P29973 AL645944.1-201ENST00000603857 493 ntBASIC4.04□□□□□ -1.76
CNGA1P29973 AC135507.2-201ENST00000612443 309 ntBASIC4.04□□□□□ -1.76
CNGA1P29973 MIR6852-201ENST00000621699 66 ntBASIC4.04□□□□□ -1.76
CNGA1P29973 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
CNGA1P29973 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
CNGA1P29973 GABRG2-229ENST00000641017 3628 ntBASIC4.03□□□□□ -1.76
CNGA1P29973 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
CNGA1P29973 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
CNGA1P29973 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC4.03□□□□□ -1.76
CNGA1P29973 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC4.03□□□□□ -1.76
CNGA1P29973 FRG1CP-201ENST00000358464 769 ntBASIC4.03□□□□□ -1.76
CNGA1P29973 SNORD113-7-201ENST00000363762 77 ntBASIC4.03□□□□□ -1.76
CNGA1P29973 RNU6-831P-201ENST00000384548 107 ntBASIC4.03□□□□□ -1.76
CNGA1P29973 RPL21P109-201ENST00000422213 475 ntBASIC4.03□□□□□ -1.76
CNGA1P29973 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC4.03□□□□□ -1.76
CNGA1P29973 NDUFB1P1-201ENST00000435191 180 ntBASIC4.03□□□□□ -1.76
CNGA1P29973 IFNA20P-201ENST00000436840 528 ntBASIC4.03□□□□□ -1.76
CNGA1P29973 AL714022.1-201ENST00000439897 151 ntBASIC4.03□□□□□ -1.76
CNGA1P29973 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC4.03□□□□□ -1.76
CNGA1P29973 RPL23AP14-201ENST00000468281 468 ntBASIC4.03□□□□□ -1.76
CNGA1P29973 RPS27AP10-201ENST00000496103 208 ntBASIC4.03□□□□□ -1.76
CNGA1P29973 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC4.03□□□□□ -1.76
CNGA1P29973 RNU4-49P-201ENST00000516080 140 ntBASIC4.03□□□□□ -1.76
CNGA1P29973 RNU6-1183P-201ENST00000517054 60 ntBASIC4.03□□□□□ -1.76
CNGA1P29973 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC4.03□□□□□ -1.76
CNGA1P29973 CYCSP39-201ENST00000565821 309 ntBASIC4.03□□□□□ -1.76
CNGA1P29973 MIR5692C1-201ENST00000585309 91 ntBASIC4.03□□□□□ -1.76
CNGA1P29973 YPEL5P2-201ENST00000605553 359 ntBASIC4.03□□□□□ -1.76
CNGA1P29973 AL121757.2-201ENST00000611223 313 ntBASIC4.03□□□□□ -1.76
CNGA1P29973 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
CNGA1P29973 MIR7112-201ENST00000616126 65 ntBASIC4.03□□□□□ -1.76
CNGA1P29973 U6.99-201ENST00000637524 83 ntBASIC4.03□□□□□ -1.76
CNGA1P29973 MTND5P7-201ENST00000413558 1798 ntBASIC4.03□□□□□ -1.76
CNGA1P29973 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC4.03□□□□□ -1.76
CNGA1P29973 TTN-204ENST00000360870 18218 ntTSL 5 BASIC4.02□□□□□ -1.77
CNGA1P29973 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC4.02□□□□□ -1.77
CNGA1P29973 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC4.02□□□□□ -1.77
CNGA1P29973 Z98749.2-208ENST00000381646 500 ntBASIC4.02□□□□□ -1.77
CNGA1P29973 RNU6-658P-201ENST00000384606 106 ntBASIC4.02□□□□□ -1.77
CNGA1P29973 SNORD17-201ENST00000390930 237 ntBASIC4.02□□□□□ -1.77
CNGA1P29973 RNA5SP252-201ENST00000391131 119 ntBASIC4.02□□□□□ -1.77
CNGA1P29973 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC4.02□□□□□ -1.77
CNGA1P29973 PDCL2P1-201ENST00000419302 352 ntBASIC4.02□□□□□ -1.77
CNGA1P29973 HMGB1P9-201ENST00000429856 646 ntBASIC4.02□□□□□ -1.77
CNGA1P29973 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC4.02□□□□□ -1.77
CNGA1P29973 RPL26P9-201ENST00000457466 433 ntBASIC4.02□□□□□ -1.77
CNGA1P29973 TAF8-207ENST00000482432 556 ntTSL 2 BASIC4.02□□□□□ -1.77
CNGA1P29973 RPL7P47-201ENST00000497299 556 ntBASIC4.02□□□□□ -1.77
CNGA1P29973 TRBVA-201ENST00000498804 316 ntBASIC4.02□□□□□ -1.77
CNGA1P29973 RNU6-875P-201ENST00000516488 106 ntBASIC4.02□□□□□ -1.77
CNGA1P29973 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC4.02□□□□□ -1.77
CNGA1P29973 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC4.02□□□□□ -1.77
CNGA1P29973 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC4.02□□□□□ -1.77
CNGA1P29973 AC243972.3-201ENST00000539655 198 ntBASIC4.02□□□□□ -1.77
CNGA1P29973 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC4.02□□□□□ -1.77
CNGA1P29973 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC4.02□□□□□ -1.77
CNGA1P29973 MIR4782-201ENST00000577987 79 ntBASIC4.02□□□□□ -1.77
CNGA1P29973 MIR4742-201ENST00000581069 85 ntBASIC4.02□□□□□ -1.77
CNGA1P29973 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC4.02□□□□□ -1.77
CNGA1P29973 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
CNGA1P29973 AC007256.1-201ENST00000392253 2765 ntBASIC4.02□□□□□ -1.77
CNGA1P29973 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC4.01□□□□□ -1.77
CNGA1P29973 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC4.01□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 159.7 ms