Protein–RNA interactions for Protein: P28068

HLA-DMB, HLA class II histocompatibility antigen, DM beta chain, humanhuman

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMBP28068 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC1.24□□□□□ -2.21
HLA-DMBP28068 DDX43P2-201ENST00000604753 1354 ntBASIC1.24□□□□□ -2.21
HLA-DMBP28068 UBE2L2-201ENST00000254302 429 ntBASIC1.24□□□□□ -2.21
HLA-DMBP28068 SNRPE-201ENST00000367208 355 ntTSL 2 BASIC1.24□□□□□ -2.21
HLA-DMBP28068 AL359634.1-202ENST00000404721 284 ntBASIC1.24□□□□□ -2.21
HLA-DMBP28068 OR51A5P-201ENST00000415429 942 ntBASIC1.24□□□□□ -2.21
HLA-DMBP28068 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC1.24□□□□□ -2.21
HLA-DMBP28068 AC020571.1-201ENST00000430904 768 ntTSL 2 BASIC1.24□□□□□ -2.21
HLA-DMBP28068 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC1.24□□□□□ -2.21
HLA-DMBP28068 LINC01680-201ENST00000434983 299 ntTSL 2 BASIC1.24□□□□□ -2.21
HLA-DMBP28068 AC017099.1-201ENST00000448261 1028 ntBASIC1.24□□□□□ -2.21
HLA-DMBP28068 SNORD13-201ENST00000459299 104 ntBASIC1.24□□□□□ -2.21
HLA-DMBP28068 AC011005.2-201ENST00000487324 359 ntBASIC1.24□□□□□ -2.21
HLA-DMBP28068 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC1.24□□□□□ -2.21
HLA-DMBP28068 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC1.24□□□□□ -2.21
HLA-DMBP28068 AC097478.1-204ENST00000509723 547 ntTSL 3 BASIC1.24□□□□□ -2.21
HLA-DMBP28068 MTCO3P27-201ENST00000514397 196 ntBASIC1.24□□□□□ -2.21
HLA-DMBP28068 RNU6-150P-201ENST00000516237 95 ntBASIC1.24□□□□□ -2.21
HLA-DMBP28068 ACA59.2-201ENST00000517061 156 ntBASIC1.24□□□□□ -2.21
HLA-DMBP28068 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC1.24□□□□□ -2.21
HLA-DMBP28068 AC021451.1-201ENST00000523498 1129 ntBASIC1.24□□□□□ -2.21
HLA-DMBP28068 AC084851.1-201ENST00000529105 249 ntBASIC1.24□□□□□ -2.21
HLA-DMBP28068 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC1.24□□□□□ -2.21
HLA-DMBP28068 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC1.24□□□□□ -2.21
HLA-DMBP28068 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC1.24□□□□□ -2.21
HLA-DMBP28068 AL118556.1-201ENST00000555257 502 ntTSL 2 BASIC1.24□□□□□ -2.21
HLA-DMBP28068 MTCYBP23-201ENST00000558717 1102 ntBASIC1.24□□□□□ -2.21
HLA-DMBP28068 AC126118.1-201ENST00000607744 628 ntBASIC1.24□□□□□ -2.21
HLA-DMBP28068 AC097655.1-201ENST00000635075 318 ntBASIC1.24□□□□□ -2.21
HLA-DMBP28068 Z99571.1-201ENST00000636677 394 ntBASIC1.24□□□□□ -2.21
HLA-DMBP28068 ATM-230ENST00000640388 578 ntTSL 5 BASIC1.24□□□□□ -2.21
HLA-DMBP28068 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC1.24□□□□□ -2.21
HLA-DMBP28068 RNU6-512P-201ENST00000364438 103 ntBASIC1.23□□□□□ -2.21
HLA-DMBP28068 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC1.23□□□□□ -2.21
HLA-DMBP28068 RNA5SP212-201ENST00000391223 107 ntBASIC1.23□□□□□ -2.21
HLA-DMBP28068 AL591034.2-201ENST00000402839 359 ntBASIC1.23□□□□□ -2.21
HLA-DMBP28068 MIR1302-8-201ENST00000408342 128 ntBASIC1.23□□□□□ -2.21
HLA-DMBP28068 RN7SKP101-201ENST00000411376 320 ntBASIC1.23□□□□□ -2.21
HLA-DMBP28068 VN1R36P-201ENST00000414936 291 ntBASIC1.23□□□□□ -2.21
HLA-DMBP28068 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC1.23□□□□□ -2.21
HLA-DMBP28068 AC104777.3-201ENST00000416350 545 ntTSL 3 BASIC1.23□□□□□ -2.21
HLA-DMBP28068 AL162254.1-202ENST00000419604 497 ntTSL 5 BASIC1.23□□□□□ -2.21
HLA-DMBP28068 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC1.23□□□□□ -2.21
HLA-DMBP28068 OPA1-AS1-201ENST00000433105 492 ntTSL 3 BASIC1.23□□□□□ -2.21
HLA-DMBP28068 RPS15AP9-201ENST00000439856 381 ntBASIC1.23□□□□□ -2.21
HLA-DMBP28068 BRK1P2-201ENST00000442875 223 ntBASIC1.23□□□□□ -2.21
HLA-DMBP28068 KATNBL1P6-201ENST00000453433 915 ntBASIC1.23□□□□□ -2.21
HLA-DMBP28068 AL160287.1-201ENST00000455612 432 ntTSL 3 BASIC1.23□□□□□ -2.21
HLA-DMBP28068 RPL7P43-201ENST00000478876 753 ntBASIC1.23□□□□□ -2.21
HLA-DMBP28068 RNU6-991P-201ENST00000516168 107 ntBASIC1.23□□□□□ -2.21
HLA-DMBP28068 RNU6-1028P-201ENST00000517164 93 ntBASIC1.23□□□□□ -2.21
HLA-DMBP28068 NARSP2-202ENST00000522022 349 ntTSL 3 BASIC1.23□□□□□ -2.21
HLA-DMBP28068 MTERF3-203ENST00000522822 1148 ntTSL 2 BASIC1.23□□□□□ -2.21
HLA-DMBP28068 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC1.23□□□□□ -2.21
HLA-DMBP28068 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC1.23□□□□□ -2.21
HLA-DMBP28068 AP005435.4-201ENST00000529514 284 ntBASIC1.23□□□□□ -2.21
HLA-DMBP28068 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC1.23□□□□□ -2.21
HLA-DMBP28068 AL132657.2-201ENST00000564417 358 ntBASIC1.23□□□□□ -2.21
HLA-DMBP28068 AC026271.5-201ENST00000577873 130 ntBASIC1.23□□□□□ -2.21
HLA-DMBP28068 AC126365.2-201ENST00000580630 379 ntBASIC1.23□□□□□ -2.21
HLA-DMBP28068 AP005901.2-201ENST00000581690 525 ntTSL 3 BASIC1.23□□□□□ -2.21
HLA-DMBP28068 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC1.23□□□□□ -2.21
HLA-DMBP28068 AC090186.1-201ENST00000605991 572 ntBASIC1.23□□□□□ -2.21
HLA-DMBP28068 RNU6-91P-201ENST00000607774 107 ntBASIC1.23□□□□□ -2.21
HLA-DMBP28068 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC1.23□□□□□ -2.21
HLA-DMBP28068 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC1.23□□□□□ -2.21
HLA-DMBP28068 AP000676.3-201ENST00000623299 569 ntBASIC1.23□□□□□ -2.21
HLA-DMBP28068 AC091948.2-201ENST00000636510 279 ntBASIC1.23□□□□□ -2.21
HLA-DMBP28068 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC1.23□□□□□ -2.21
HLA-DMBP28068 WWP1P1-201ENST00000466609 2769 ntBASIC1.23□□□□□ -2.21
HLA-DMBP28068 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC1.23□□□□□ -2.21
HLA-DMBP28068 AP000776.1-201ENST00000530032 1663 ntBASIC1.23□□□□□ -2.21
HLA-DMBP28068 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC1.22□□□□□ -2.21
HLA-DMBP28068 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC1.22□□□□□ -2.21
HLA-DMBP28068 RNU1-23P-201ENST00000363361 144 ntBASIC1.22□□□□□ -2.21
HLA-DMBP28068 AL590084.1-201ENST00000407885 387 ntBASIC1.22□□□□□ -2.21
HLA-DMBP28068 AC078974.1-201ENST00000411597 223 ntBASIC1.22□□□□□ -2.21
HLA-DMBP28068 AL449283.1-202ENST00000418249 604 ntBASIC1.22□□□□□ -2.21
HLA-DMBP28068 AL953862.1-201ENST00000423016 168 ntBASIC1.22□□□□□ -2.21
HLA-DMBP28068 USP9YP24-201ENST00000434374 697 ntBASIC1.22□□□□□ -2.21
HLA-DMBP28068 AL139237.2-201ENST00000438454 493 ntTSL 3 BASIC1.22□□□□□ -2.21
HLA-DMBP28068 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC1.22□□□□□ -2.21
HLA-DMBP28068 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC1.22□□□□□ -2.21
HLA-DMBP28068 SSXP1-201ENST00000453640 473 ntBASIC1.22□□□□□ -2.21
HLA-DMBP28068 AC112771.1-201ENST00000463581 102 ntBASIC1.22□□□□□ -2.21
HLA-DMBP28068 OARD1-209ENST00000471367 401 ntTSL 2 BASIC1.22□□□□□ -2.21
HLA-DMBP28068 C4orf33-204ENST00000502887 1126 ntTSL 1 (best) BASIC1.22□□□□□ -2.21
HLA-DMBP28068 AC104137.1-201ENST00000503625 385 ntTSL 3 BASIC1.22□□□□□ -2.21
HLA-DMBP28068 AC026719.1-201ENST00000506059 456 ntTSL 3 BASIC1.22□□□□□ -2.21
HLA-DMBP28068 AC116655.1-201ENST00000508324 901 ntBASIC1.22□□□□□ -2.21
HLA-DMBP28068 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC1.22□□□□□ -2.21
HLA-DMBP28068 RNU5B-3P-201ENST00000516601 115 ntBASIC1.22□□□□□ -2.21
HLA-DMBP28068 RNU6-678P-201ENST00000516832 109 ntBASIC1.22□□□□□ -2.21
HLA-DMBP28068 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC1.22□□□□□ -2.21
HLA-DMBP28068 AC023632.5-201ENST00000521010 491 ntTSL 3 BASIC1.22□□□□□ -2.21
HLA-DMBP28068 PSMA3P-201ENST00000555485 635 ntBASIC1.22□□□□□ -2.21
HLA-DMBP28068 MIR3683-201ENST00000580847 82 ntBASIC1.22□□□□□ -2.21
HLA-DMBP28068 MIR4285-201ENST00000581001 85 ntBASIC1.22□□□□□ -2.21
HLA-DMBP28068 BNIP3P25-201ENST00000596023 559 ntBASIC1.22□□□□□ -2.21
HLA-DMBP28068 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC1.22□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 80.5 ms